Miyakogusa Predicted Gene

Lj2g3v3317710.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3317710.2 Non Chatacterized Hit- tr|I1QRT8|I1QRT8_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,84.38,0,G-patch,G-patch domain; glycine rich nucleic binding
domain,G-patch domain; G_PATCH,G-patch domain; ,CUFF.40035.2
         (157 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g42690.1                                                       275   2e-74
Glyma08g16200.1                                                       267   3e-72
Glyma19g41310.1                                                        53   2e-07

>Glyma15g42690.1 
          Length = 436

 Score =  275 bits (702), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 134/157 (85%), Positives = 147/157 (93%)

Query: 1   MEFYMKKAAREERSKQPKQSKDEMPPPASLQGKKGHHMGDYIPLEELEKFMASCNDAGAQ 60
           MEFYMKKAAREE+ KQPK SKDEMPPPASL GKKGHHMGD+IP EELEKF+A+CNDA AQ
Sbjct: 280 MEFYMKKAAREEKYKQPKHSKDEMPPPASLLGKKGHHMGDFIPPEELEKFLATCNDAAAQ 339

Query: 61  KVLKETAEKAKIQADNVGHKLLSKMGWKEGEGLGGSRKGISDPIMAGNVKKDHLGVGAVQ 120
           K   E AE+AKIQADNVGH+LLSKMGWKEGEGLGGSRKGI+DPIMAGNVKK++LGVGA +
Sbjct: 340 KAAMEAAERAKIQADNVGHRLLSKMGWKEGEGLGGSRKGIADPIMAGNVKKNNLGVGAQE 399

Query: 121 PGEVTSEDDIYEQYKKRMMLGYRHRPNPLNNPRKAYY 157
           PGEV++EDDIYEQYKKRMMLGYR+RPNPLNNPRKAYY
Sbjct: 400 PGEVSAEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY 436


>Glyma08g16200.1 
          Length = 435

 Score =  267 bits (683), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 134/157 (85%), Positives = 148/157 (94%)

Query: 1   MEFYMKKAAREERSKQPKQSKDEMPPPASLQGKKGHHMGDYIPLEELEKFMASCNDAGAQ 60
           MEFYMKKAAREE+ KQPK SKDEMPPPASL GKKGHHMGD+IP EELEKF+A+CNDA AQ
Sbjct: 279 MEFYMKKAAREEKYKQPKHSKDEMPPPASLLGKKGHHMGDFIPPEELEKFLATCNDAAAQ 338

Query: 61  KVLKETAEKAKIQADNVGHKLLSKMGWKEGEGLGGSRKGISDPIMAGNVKKDHLGVGAVQ 120
           K  +E AE+AKIQADNVGH+LLSKMGWKEGEGLGGSRKGI+DPIMAGNVKK++LGVGA +
Sbjct: 339 KAAREAAERAKIQADNVGHRLLSKMGWKEGEGLGGSRKGIADPIMAGNVKKNNLGVGAQE 398

Query: 121 PGEVTSEDDIYEQYKKRMMLGYRHRPNPLNNPRKAYY 157
           PGEV++EDDIYEQYKKRMMLGYR+RPNPLNNPRKAYY
Sbjct: 399 PGEVSAEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY 435


>Glyma19g41310.1 
          Length = 304

 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 80/177 (45%), Gaps = 35/177 (19%)

Query: 1   MEFYMKKAAREERSKQPKQSKDEMPPPASLQGKKGHHMGDYIPLEEL-EKFMASCNDAGA 59
           ME+      +E   +  +QSK E     SL             +E+L E F    N    
Sbjct: 1   MEYRWTNGRQETGGRDRRQSKREQAYQDSL-------------IEDLSEDFSLPINHRPT 47

Query: 60  QKVLKETAEKA----KIQADNVGHKLLSKMGWKEGEGLGGSRKGISDPIMAGNVKKDHLG 115
           + V  +  E+A    +I + N+G KLL KMGWK G+GLG   +GI +PI +G ++   LG
Sbjct: 48  ENVDLDNVEQASLDTQITSSNIGFKLLQKMGWK-GKGLGKDEQGIIEPIKSG-IRDPRLG 105

Query: 116 VGAVQPGE-VTSEDDIY------------EQYKKRMMLGYRHR--PNPLNNPRKAYY 157
           VG  +  +  T+E++I             E  KKR +L  R +     +   RK +Y
Sbjct: 106 VGKQEEDDFFTAEENIQRKKLDVELEETEEHVKKREVLAEREQKIQTEVKEIRKVFY 162