Miyakogusa Predicted Gene

Lj2g3v3303460.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3303460.1 tr|F4K694|F4K694_ARATH RPM1-interacting protein 4
(RIN4) family protein OS=Arabidopsis thaliana
GN=N,67.53,2e-19,AvrRpt-cleavage,Pathogenic type III effector
avirulence factor Avr cleavage site,CUFF.39956.1
         (78 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g08410.1                                                       120   3e-28
Glyma02g47070.1                                                       115   1e-26
Glyma14g01680.1                                                       103   6e-23
Glyma08g44290.1                                                       101   2e-22
Glyma10g14870.1                                                        97   5e-21
Glyma17g27200.1                                                        95   2e-20
Glyma17g27150.1                                                        91   2e-19
Glyma17g23670.1                                                        89   7e-19
Glyma05g02930.1                                                        76   1e-14
Glyma02g47830.1                                                        73   7e-14
Glyma01g24790.1                                                        72   1e-13
Glyma17g13590.1                                                        70   5e-13
Glyma12g11010.1                                                        70   6e-13
Glyma06g38350.1                                                        69   2e-12
Glyma18g43890.1                                                        69   2e-12
Glyma06g34230.1                                                        68   2e-12
Glyma11g37530.1                                                        68   2e-12
Glyma04g26660.1                                                        68   2e-12
Glyma18g01480.1                                                        67   5e-12
Glyma16g12160.1                                                        56   7e-09
Glyma18g36000.1                                                        55   2e-08
Glyma03g19920.1                                                        54   3e-08
Glyma08g46400.1                                                        54   4e-08
Glyma08g46400.2                                                        54   4e-08

>Glyma18g08410.1 
          Length = 79

 Score =  120 bits (301), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 57/78 (73%), Positives = 67/78 (85%), Gaps = 2/78 (2%)

Query: 3  SDKDRPLPKFGEWDVNDPASAEGYTVIFNKARDEKKTGGKPDSPGK--VDSHTRPPLDHG 60
          S+K RPLPKFGEWDVNDP SAEG+TVIFNKARDEKKTGG PDSPGK   D H++P ++ G
Sbjct: 2  SEKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGNPDSPGKTATDPHSKPAVEPG 61

Query: 61 KTQSKSWFCCVQSPPAES 78
          KTQ++ WFCC+Q+P AES
Sbjct: 62 KTQTEKWFCCMQNPSAES 79


>Glyma02g47070.1 
          Length = 78

 Score =  115 bits (288), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 59/76 (77%), Positives = 64/76 (84%), Gaps = 2/76 (2%)

Query: 3  SDKDRPLPKFGEWDVNDPASAEGYTVIFNKARDEKKT-GGKPDSPGKVDSHT-RPPLDHG 60
          SD  RPLPKFGEWDVNDPASAEGYTVIFNKAR++KKT GGKP+SP KV+  T RPPLD  
Sbjct: 2  SDTGRPLPKFGEWDVNDPASAEGYTVIFNKARNDKKTGGGKPESPAKVNPRTRRPPLDPS 61

Query: 61 KTQSKSWFCCVQSPPA 76
          KTQSK  FCC+QSPP 
Sbjct: 62 KTQSKKCFCCIQSPPV 77


>Glyma14g01680.1 
          Length = 62

 Score =  103 bits (256), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 52/62 (83%), Positives = 55/62 (88%), Gaps = 1/62 (1%)

Query: 4  DKDRPLPKFGEWDVNDPASAEGYTVIFNKARDEKKTGGKPDSPGKVDS-HTRPPLDHGKT 62
          D  RPLPKFGEWDVNDPASAEGYTVIFNKAR+EKKTGGKPDSP KV++  TRPPLD  KT
Sbjct: 1  DTGRPLPKFGEWDVNDPASAEGYTVIFNKARNEKKTGGKPDSPAKVNNPRTRPPLDPSKT 60

Query: 63 QS 64
          QS
Sbjct: 61 QS 62


>Glyma08g44290.1 
          Length = 104

 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 48/70 (68%), Positives = 58/70 (82%), Gaps = 2/70 (2%)

Query: 4  DKDRPLPKFGEWDVNDPASAEGYTVIFNKARDEKKTGGKPDSPGK--VDSHTRPPLDHGK 61
          +K RPLPKFGEWDVNDPASAEG+TVIFNKARDEKKTGG P+SPGK   D H++P ++ GK
Sbjct: 1  EKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGNPESPGKTATDPHSKPAVEPGK 60

Query: 62 TQSKSWFCCV 71
          TQ+  +  C+
Sbjct: 61 TQTGCFLFCL 70


>Glyma10g14870.1 
          Length = 64

 Score = 96.7 bits (239), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 47/63 (74%), Positives = 54/63 (85%), Gaps = 2/63 (3%)

Query: 4  DKDRPLPKFGEWDVNDPASAEGYTVIFNKARDEKKTGGKPDSPGK--VDSHTRPPLDHGK 61
          +K RPLPKFGEWDVNDP SAEG+TVIFNKARDEKKTGG PDSPGK   D H++P ++ GK
Sbjct: 2  EKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGNPDSPGKTATDPHSKPAVEPGK 61

Query: 62 TQS 64
          TQ+
Sbjct: 62 TQT 64


>Glyma17g27200.1 
          Length = 69

 Score = 94.7 bits (234), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 47/64 (73%), Positives = 54/64 (84%), Gaps = 2/64 (3%)

Query: 3  SDKDRPLPKFGEWDVNDPASAEGYTVIFNKARDEKKTGGKPDSPGK--VDSHTRPPLDHG 60
          S+K RPLPKFGEWDVNDP SAEG+TVIFNKARDEKKTGG PDSP K   D H++P ++ G
Sbjct: 2  SEKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGNPDSPRKTATDPHSKPAVEPG 61

Query: 61 KTQS 64
          KTQ+
Sbjct: 62 KTQT 65


>Glyma17g27150.1 
          Length = 63

 Score = 91.3 bits (225), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 45/63 (71%), Positives = 52/63 (82%), Gaps = 2/63 (3%)

Query: 4  DKDRPLPKFGEWDVNDPASAEGYTVIFNKARDEKKTGGKPDSPGK--VDSHTRPPLDHGK 61
          +K RPLPKFGEWDVNDP SAE +TVIFNKARDEKKTGG PDSPGK   D H++P ++  K
Sbjct: 1  EKGRPLPKFGEWDVNDPTSAEEFTVIFNKARDEKKTGGNPDSPGKTATDPHSKPAVEPSK 60

Query: 62 TQS 64
          TQ+
Sbjct: 61 TQT 63


>Glyma17g23670.1 
          Length = 66

 Score = 89.4 bits (220), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 43/54 (79%), Positives = 48/54 (88%), Gaps = 2/54 (3%)

Query: 4  DKDRPLPKFGEWDVNDPASAEGYTVIFNKARDEKKTGGKPDSPGKV--DSHTRP 55
          +K RPLPKFGEWDVNDP SAEG+TVIFNKARDEKKTGG PDSPGK+  D H++P
Sbjct: 1  EKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGNPDSPGKIATDPHSKP 54


>Glyma05g02930.1 
          Length = 72

 Score = 75.9 bits (185), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/72 (55%), Positives = 47/72 (65%), Gaps = 6/72 (8%)

Query: 2  SSDKDRPLPKFGEWDVNDPASAEGYTVIFNKARDEKKTGG---KPDSPGKVDSHTRPPLD 58
          S +  RPLPKFGEWDVN+PASAEG+TVIFNKARDEKKT     +   P   + +   P  
Sbjct: 3  SQENGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTNTATPRRSDPVFKNENYNTPQY 62

Query: 59 HGKTQSKSWFCC 70
           GK   + WFCC
Sbjct: 63 SGK---RKWFCC 71


>Glyma02g47830.1 
          Length = 80

 Score = 72.8 bits (177), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 34/75 (45%), Positives = 53/75 (70%), Gaps = 4/75 (5%)

Query: 3  SDKDRPLPKFGEWDVNDPASAEGYTVIFNKARDEKKTGG-KPDSPGKVDSHTR---PPLD 58
          +++ R LPKFG+WDVN+P++A+ ++VIFNKAR+E+KTG  K   P   ++ T+   P + 
Sbjct: 2  AERGRALPKFGDWDVNNPSAAQDFSVIFNKARNERKTGANKIHFPPNHNNTTKCNPPQVV 61

Query: 59 HGKTQSKSWFCCVQS 73
           GK+  K WFCC+ +
Sbjct: 62 LGKSHYKKWFCCINT 76


>Glyma01g24790.1 
          Length = 53

 Score = 72.0 bits (175), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 36/51 (70%), Positives = 42/51 (82%), Gaps = 2/51 (3%)

Query: 16 DVNDPASAEGYTVIFNKARDEKKTGGKPDSPGK--VDSHTRPPLDHGKTQS 64
          DVN P SAEG+TVIFNKARDEKKTGG PDSPGK   D H++P ++ GKTQ+
Sbjct: 1  DVNHPTSAEGFTVIFNKARDEKKTGGNPDSPGKTATDPHSKPAVEPGKTQT 51


>Glyma17g13590.1 
          Length = 68

 Score = 70.1 bits (170), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 31/38 (81%), Positives = 34/38 (89%)

Query: 1  MSSDKDRPLPKFGEWDVNDPASAEGYTVIFNKARDEKK 38
          M  +  RPLPKFGEWDVN+PASAEG+TVIFNKARDEKK
Sbjct: 1  MQQENGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKK 38


>Glyma12g11010.1 
          Length = 55

 Score = 69.7 bits (169), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 35/51 (68%), Positives = 41/51 (80%), Gaps = 2/51 (3%)

Query: 16 DVNDPASAEGYTVIFNKARDEKKTGGKPDSPGK--VDSHTRPPLDHGKTQS 64
          DVN P SAEG+TVIFNKARDEKKTGG PDSPGK   D H++P ++  KTQ+
Sbjct: 1  DVNHPTSAEGFTVIFNKARDEKKTGGNPDSPGKTATDPHSKPAVEPSKTQT 51


>Glyma06g38350.1 
          Length = 51

 Score = 68.6 bits (166), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 35/51 (68%), Positives = 41/51 (80%), Gaps = 2/51 (3%)

Query: 16 DVNDPASAEGYTVIFNKARDEKKTGGKPDSPGK--VDSHTRPPLDHGKTQS 64
          DVN P SAEG+TVIFNKARDEKKTGG PDSPGK   D H++P ++  KTQ+
Sbjct: 1  DVNHPTSAEGFTVIFNKARDEKKTGGNPDSPGKTATDPHSKPVVEPDKTQT 51


>Glyma18g43890.1 
          Length = 55

 Score = 68.6 bits (166), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 35/51 (68%), Positives = 41/51 (80%), Gaps = 2/51 (3%)

Query: 16 DVNDPASAEGYTVIFNKARDEKKTGGKPDSPGK--VDSHTRPPLDHGKTQS 64
          DVN P SAEG+TVIFNKARDEKKTGG PDSPGK   D H++P ++  KTQ+
Sbjct: 1  DVNHPTSAEGFTVIFNKARDEKKTGGNPDSPGKTATDPHSKPVVEPDKTQT 51


>Glyma06g34230.1 
          Length = 40

 Score = 68.2 bits (165), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 31/35 (88%), Positives = 33/35 (94%)

Query: 7  RPLPKFGEWDVNDPASAEGYTVIFNKARDEKKTGG 41
          +PLPKFGEWDVNDPAS E +TVIFNKARDEKKTGG
Sbjct: 2  KPLPKFGEWDVNDPASTEEFTVIFNKARDEKKTGG 36


>Glyma11g37530.1 
          Length = 77

 Score = 68.2 bits (165), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 30/34 (88%), Positives = 32/34 (94%)

Query: 7  RPLPKFGEWDVNDPASAEGYTVIFNKARDEKKTG 40
          +PLPKFGEWDVNDPASAEG+TVIFNKARDEKK  
Sbjct: 10 KPLPKFGEWDVNDPASAEGFTVIFNKARDEKKIA 43


>Glyma04g26660.1 
          Length = 51

 Score = 68.2 bits (165), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 35/51 (68%), Positives = 41/51 (80%), Gaps = 2/51 (3%)

Query: 16 DVNDPASAEGYTVIFNKARDEKKTGGKPDSPGK--VDSHTRPPLDHGKTQS 64
          DVN P SAEG+TVIFNKA DEKKTGG PDSPGK   D H++P ++ GKTQ+
Sbjct: 1  DVNHPTSAEGFTVIFNKAGDEKKTGGNPDSPGKTATDPHSKPVVEPGKTQT 51


>Glyma18g01480.1 
          Length = 80

 Score = 67.0 bits (162), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 29/34 (85%), Positives = 32/34 (94%)

Query: 7  RPLPKFGEWDVNDPASAEGYTVIFNKARDEKKTG 40
          +PLPKFGEWDVNDPASAEG+TVIFNKARD+KK  
Sbjct: 10 KPLPKFGEWDVNDPASAEGFTVIFNKARDDKKIA 43


>Glyma16g12160.1 
          Length = 246

 Score = 56.2 bits (134), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 7/69 (10%)

Query: 4   DKDRPLPKFGEWDVNDPASAEGYTVIFNKARDEKKTGGKPDSPGKVDS--HTRPPLDHGK 61
           DK   +PKFG+WDVN+PASA+G+T IFNK R+E++ G     PG+V    + RP   +G 
Sbjct: 175 DKGAAVPKFGDWDVNNPASADGFTHIFNKVREERQGG-----PGQVPGTPNERPQPINGL 229

Query: 62  TQSKSWFCC 70
           +      CC
Sbjct: 230 SNDDKVQCC 238


>Glyma18g36000.1 
          Length = 246

 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 24/37 (64%), Positives = 30/37 (81%)

Query: 4   DKDRPLPKFGEWDVNDPASAEGYTVIFNKARDEKKTG 40
           DK   +PKFGEWD ++PASA+GYT IFNK R+EK+ G
Sbjct: 176 DKGAAVPKFGEWDESNPASADGYTHIFNKVREEKQVG 212


>Glyma03g19920.1 
          Length = 246

 Score = 54.3 bits (129), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 7/69 (10%)

Query: 4   DKDRPLPKFGEWDVNDPASAEGYTVIFNKARDEKKTGGKPDSPGKVDS--HTRPPLDHGK 61
           DK   +PKFG+WDVN+P+SA+G+T IFNK R+E++       PG+V    + RP    G+
Sbjct: 175 DKGAAVPKFGDWDVNNPSSADGFTHIFNKVREERQG-----VPGQVPGTPNERPQAIRGQ 229

Query: 62  TQSKSWFCC 70
           +      CC
Sbjct: 230 SNDDKVQCC 238


>Glyma08g46400.1 
          Length = 248

 Score = 53.9 bits (128), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 40/70 (57%), Gaps = 6/70 (8%)

Query: 4   DKDRPLPKFGEWDVNDPASAEGYTVIFNKARDEKKTGGK--PDSPGKVDSHTRPPLDHGK 61
           D+   +PKFGEWD ++PASA+GYT IFNK R+EK+ G    P +P       R    + K
Sbjct: 178 DEGAAVPKFGEWDESNPASADGYTHIFNKVREEKQVGAGHVPGTPNGRQYAARNQRANDK 237

Query: 62  TQSKSWFCCV 71
            QS    CC 
Sbjct: 238 AQS----CCF 243


>Glyma08g46400.2 
          Length = 237

 Score = 53.9 bits (128), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 40/70 (57%), Gaps = 6/70 (8%)

Query: 4   DKDRPLPKFGEWDVNDPASAEGYTVIFNKARDEKKTGGK--PDSPGKVDSHTRPPLDHGK 61
           D+   +PKFGEWD ++PASA+GYT IFNK R+EK+ G    P +P       R    + K
Sbjct: 167 DEGAAVPKFGEWDESNPASADGYTHIFNKVREEKQVGAGHVPGTPNGRQYAARNQRANDK 226

Query: 62  TQSKSWFCCV 71
            QS    CC 
Sbjct: 227 AQS----CCF 232