Miyakogusa Predicted Gene
- Lj2g3v3249980.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v3249980.1 Non Chatacterized Hit- tr|I3SPP4|I3SPP4_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2 SV,76.92,6e-17,SBT
domain,Transcription factor, SBP-box; coiled-coil,NULL;
SBP,Transcription factor, SBP-box; no de,gene.g44494.t1.1
(189 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma15g08270.1 75 3e-14
Glyma13g31090.1 75 4e-14
Glyma13g24590.1 69 4e-12
Glyma07g31880.2 66 2e-11
Glyma07g31880.1 66 2e-11
Glyma11g08910.1 51 7e-07
Glyma20g00900.1 49 3e-06
Glyma07g19770.1 48 7e-06
Glyma18g36960.1 47 9e-06
>Glyma15g08270.1
Length = 138
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 51 WYEGKRTLRYKXXXXXXXXXXXXXXX---XGRRKRVVTDLYSKRGSKGGSSVPPSCQVEN 107
W EGKR++ YK GR+K+VV+ SKRGSK G SVPPSCQV+
Sbjct: 5 WSEGKRSMSYKEEDEYEEEEEEEVSEYRDDGRKKKVVS---SKRGSKAGGSVPPSCQVDG 61
Query: 108 CDADLSEAKQYHRRHKV 124
C ADLSEAK YHRRHKV
Sbjct: 62 CSADLSEAKPYHRRHKV 78
>Glyma13g31090.1
Length = 138
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 49/77 (63%), Gaps = 6/77 (7%)
Query: 51 WYEGKRTLRYKXXXXXXXXXXXXXXX---XGRRKRVVTDLYSKRGSKGGSSVPPSCQVEN 107
W EGKR++ YK G++KRVV++ KRGSK G SVPPSCQV+
Sbjct: 5 WSEGKRSMSYKEEDEYEEEEEEEVSEYGDDGKKKRVVSN---KRGSKAGGSVPPSCQVDG 61
Query: 108 CDADLSEAKQYHRRHKV 124
C+ADLSEAK YHRRHKV
Sbjct: 62 CNADLSEAKPYHRRHKV 78
>Glyma13g24590.1
Length = 142
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 51/80 (63%), Gaps = 8/80 (10%)
Query: 53 EGKRTLRYKXXXXXXXXXXXXX-------XXXGRR-KRVVTDLYSKRGSKGGSSVPPSCQ 104
EGKR +RYK GRR KRV+ DLY KRGSKGG S+ PSCQ
Sbjct: 7 EGKRVMRYKEEDDDNDDEEEEEVVSEMGFEEDGRRNKRVIRDLYGKRGSKGGGSITPSCQ 66
Query: 105 VENCDADLSEAKQYHRRHKV 124
V+NCDADLSEAKQYHRRHKV
Sbjct: 67 VDNCDADLSEAKQYHRRHKV 86
>Glyma07g31880.2
Length = 113
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 46/81 (56%), Gaps = 8/81 (9%)
Query: 52 YEGKRTLRYKXXXXXXXXXXXXXXXX-------GRRKRVVTDLYSKRGSKGGSS-VPPSC 103
YEGKR LRYK R KRV+ DL+ KR G +PPSC
Sbjct: 6 YEGKRVLRYKEEDENDDDEEEEEVSEVGFGADRRRNKRVMRDLHGKRSGSKGGGSMPPSC 65
Query: 104 QVENCDADLSEAKQYHRRHKV 124
QV+NCDADLSEAKQYHRRHKV
Sbjct: 66 QVDNCDADLSEAKQYHRRHKV 86
>Glyma07g31880.1
Length = 146
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 46/81 (56%), Gaps = 8/81 (9%)
Query: 52 YEGKRTLRYKXXXXXXXXXXXXXXXX-------GRRKRVVTDLYSKRGSKGGSS-VPPSC 103
YEGKR LRYK R KRV+ DL+ KR G +PPSC
Sbjct: 6 YEGKRVLRYKEEDENDDDEEEEEVSEVGFGADRRRNKRVMRDLHGKRSGSKGGGSMPPSC 65
Query: 104 QVENCDADLSEAKQYHRRHKV 124
QV+NCDADLSEAKQYHRRHKV
Sbjct: 66 QVDNCDADLSEAKQYHRRHKV 86
>Glyma11g08910.1
Length = 157
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 103 CQVENCDADLSEAKQYHRRHKVFPRGFYPSKVLMRPVLE------DSMSYQNLMTLKGVV 156
CQ + C +LS AK Y+RRHKV R VL+ + + SM+ Q+LMT K V
Sbjct: 45 CQADECGVNLSMAKSYNRRHKVCERHAKAPVVLVSSIRQRFCQQCSSMNLQSLMTPKEVA 104
Query: 157 GGVWLGIMRGVA 168
G W GIM V
Sbjct: 105 GKHWQGIMSEVV 116
>Glyma20g00900.1
Length = 1009
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 78 GRRKRVVTDLYSKRGSKGGSSVPPSCQVENCDADLSEAKQYHRRHKVFPRGFYPSKVLM 136
GR ++ + GS G SS P CQV+NC DLS+AK YHRRHKV SK L+
Sbjct: 70 GRTNNSNSNKRVRSGSPGTSSYP-MCQVDNCREDLSKAKDYHRRHKVCEAHSKASKALL 127
>Glyma07g19770.1
Length = 1019
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 90 KRGSKGGSSVPPSCQVENCDADLSEAKQYHRRHKVFPRGFYPSKVLM 136
+ GS G +S P CQV+NC DLS+AK YHRRHKV SK L+
Sbjct: 91 RSGSPGTASYP-MCQVDNCREDLSKAKDYHRRHKVCEAHSKASKALL 136
>Glyma18g36960.1
Length = 350
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Query: 79 RRKRVVTDL--YSKRGSKGGSSVPPSCQVENCDADLSEAKQYHRRHKV 124
+ RVV+ SK+G +GGS PP CQVE C DLS AK Y+ RHKV
Sbjct: 40 KTSRVVSSPSSASKKG-RGGSLQPPRCQVEGCKVDLSGAKAYYSRHKV 86