Miyakogusa Predicted Gene

Lj2g3v3224260.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3224260.1 Non Chatacterized Hit- tr|A9NK26|A9NK26_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,64.29,4e-19,ATP_synt_H,ATPase, V0 complex, subunit E; VACUOLAR ATP
SYNTHASE SUBUNIT H,ATPase, V0 complex, subuni,CUFF.39895.1
         (112 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g02100.1                                                       126   4e-30
Glyma08g43510.1                                                       124   2e-29
Glyma02g46540.1                                                       123   6e-29
Glyma08g43510.3                                                       118   2e-27
Glyma08g43510.2                                                       118   2e-27
Glyma18g10020.1                                                        79   1e-15
Glyma02g46540.2                                                        55   1e-08

>Glyma14g02100.1 
          Length = 70

 Score =  126 bits (317), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 62/70 (88%), Positives = 63/70 (90%)

Query: 43  MGFPATTLIFAAIGIVASLCTVICFNRGSSSNLFHLTLVLTATICCWMMWAIVYLAQMKP 102
           MGF  TTLIFA IGIVASLCT ICFNRG S+NLFHLTLVLTAT CCWMMWAIVYLAQMKP
Sbjct: 1   MGFSVTTLIFAVIGIVASLCTRICFNRGPSANLFHLTLVLTATTCCWMMWAIVYLAQMKP 60

Query: 103 LIVPILSEAE 112
           LIVPILSE E
Sbjct: 61  LIVPILSEGE 70


>Glyma08g43510.1 
          Length = 97

 Score =  124 bits (312), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 60/83 (72%), Positives = 67/83 (80%)

Query: 30  LFSPIRIWHQSTDMGFPATTLIFAAIGIVASLCTVICFNRGSSSNLFHLTLVLTATICCW 89
           +FS   +  +  DMGF  TTLIF  IGI+A LCT IC NRG S+NLFHLTLV+TATICCW
Sbjct: 15  VFSDRDLEGKRIDMGFLVTTLIFVVIGIIACLCTRICCNRGPSANLFHLTLVITATICCW 74

Query: 90  MMWAIVYLAQMKPLIVPILSEAE 112
           MMWAIVYLAQMKPLIVPIL+E E
Sbjct: 75  MMWAIVYLAQMKPLIVPILNEGE 97


>Glyma02g46540.1 
          Length = 70

 Score =  123 bits (308), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 60/70 (85%), Positives = 62/70 (88%)

Query: 43  MGFPATTLIFAAIGIVASLCTVICFNRGSSSNLFHLTLVLTATICCWMMWAIVYLAQMKP 102
           MGF  TTL+FA IGIVASL T ICFNRG S+NLFHLTLVLTAT CCWMMWAIVYLAQMKP
Sbjct: 1   MGFSVTTLVFAVIGIVASLSTRICFNRGPSANLFHLTLVLTATTCCWMMWAIVYLAQMKP 60

Query: 103 LIVPILSEAE 112
           LIVPILSE E
Sbjct: 61  LIVPILSEGE 70


>Glyma08g43510.3 
          Length = 70

 Score =  118 bits (295), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 57/70 (81%), Positives = 61/70 (87%)

Query: 43  MGFPATTLIFAAIGIVASLCTVICFNRGSSSNLFHLTLVLTATICCWMMWAIVYLAQMKP 102
           MGF  TTLIF  IGI+A LCT IC NRG S+NLFHLTLV+TATICCWMMWAIVYLAQMKP
Sbjct: 1   MGFLVTTLIFVVIGIIACLCTRICCNRGPSANLFHLTLVITATICCWMMWAIVYLAQMKP 60

Query: 103 LIVPILSEAE 112
           LIVPIL+E E
Sbjct: 61  LIVPILNEGE 70


>Glyma08g43510.2 
          Length = 70

 Score =  118 bits (295), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 57/70 (81%), Positives = 61/70 (87%)

Query: 43  MGFPATTLIFAAIGIVASLCTVICFNRGSSSNLFHLTLVLTATICCWMMWAIVYLAQMKP 102
           MGF  TTLIF  IGI+A LCT IC NRG S+NLFHLTLV+TATICCWMMWAIVYLAQMKP
Sbjct: 1   MGFLVTTLIFVVIGIIACLCTRICCNRGPSANLFHLTLVITATICCWMMWAIVYLAQMKP 60

Query: 103 LIVPILSEAE 112
           LIVPIL+E E
Sbjct: 61  LIVPILNEGE 70


>Glyma18g10020.1 
          Length = 79

 Score = 79.0 bits (193), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 37/53 (69%), Positives = 43/53 (81%)

Query: 43 MGFPATTLIFAAIGIVASLCTVICFNRGSSSNLFHLTLVLTATICCWMMWAIV 95
          MGF  TTLIF  IGI+A LCT IC NRG S+NLFHLTLV+TATICCWM+ + +
Sbjct: 1  MGFLVTTLIFVVIGIIACLCTRICCNRGPSTNLFHLTLVITATICCWMICSFI 53


>Glyma02g46540.2 
          Length = 50

 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 25/35 (71%), Positives = 29/35 (82%)

Query: 43 MGFPATTLIFAAIGIVASLCTVICFNRGSSSNLFH 77
          MGF  TTL+FA IGIVASL T ICFNRG S+NL++
Sbjct: 1  MGFSVTTLVFAVIGIVASLSTRICFNRGPSANLYY 35