Miyakogusa Predicted Gene

Lj2g3v3210780.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3210780.1 tr|A4RSJ3|A4RSJ3_OSTLU Predicted protein
OS=Ostreococcus lucimarinus (strain CCE9901) GN=Z PE=4
SV=1,29.75,8e-18,no description,Trigger factor, ribosome-binding,
bacterial; seg,NULL; Trigger factor ribosome-bindin,CUFF.39890.1
         (257 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g02220.1                                                       353   7e-98
Glyma14g02220.2                                                       353   8e-98
Glyma02g46430.1                                                       348   5e-96
Glyma14g02420.1                                                       281   5e-76
Glyma14g02400.1                                                       230   1e-60
Glyma14g02390.1                                                       149   3e-36

>Glyma14g02220.1 
          Length = 545

 Score =  353 bits (907), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 185/264 (70%), Positives = 195/264 (73%), Gaps = 10/264 (3%)

Query: 3   MELCTQTFTRVXXXXXXXXXXXXXXXXRANTSTRPFKSNSFKLSSLTPHIHLFQPFIHHH 62
           MELCT+TFT                   AN  T PFK NS KLSS  PHIHLFQPF+  H
Sbjct: 1   MELCTRTFTSFFLFNPSSSSNPLFLRANANAKT-PFKFNSLKLSSFPPHIHLFQPFLSPH 59

Query: 63  XXX--------XXXXXXXXXXXXXXEKDRLPADLIVTETEESNSRVRLHVEVPPLVCEDC 114
                                    E+DRLPA+L VTET E NSRVRLHVEVP LVCEDC
Sbjct: 60  TSSPFTLSAASASSSSSSSSVAVGTEQDRLPAELNVTETAEPNSRVRLHVEVPSLVCEDC 119

Query: 115 YNTVIAEFTKQAKIPGFRPGKKVPESILISYVGKKNVQGATIESILKRTLSHAMESVTGR 174
           Y  VIAEF KQAKIPGFRPGKKVPESILISYVG +NVQ ATIESIL+RTLSHAM SVTGR
Sbjct: 120 YKRVIAEFMKQAKIPGFRPGKKVPESILISYVGSQNVQKATIESILRRTLSHAMTSVTGR 179

Query: 175 ALQDSVRIVTKFSDMEETYSSLGFLRYDVIVDVAPEIKWISD-NAYKNLKIVVELDSDID 233
           ALQDSVRIVTKFS+MEETYSSLG LRYDV+VD+APEIKWI D NAYKNLKIVVE+DSDID
Sbjct: 180 ALQDSVRIVTKFSEMEETYSSLGSLRYDVLVDIAPEIKWIPDNNAYKNLKIVVEIDSDID 239

Query: 234 AHKASEQVFRRRYKSTGALKVVTD 257
           AH ASEQ FRRRYKS GALKVVTD
Sbjct: 240 AHTASEQEFRRRYKSIGALKVVTD 263


>Glyma14g02220.2 
          Length = 542

 Score =  353 bits (907), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 185/264 (70%), Positives = 195/264 (73%), Gaps = 10/264 (3%)

Query: 3   MELCTQTFTRVXXXXXXXXXXXXXXXXRANTSTRPFKSNSFKLSSLTPHIHLFQPFIHHH 62
           MELCT+TFT                   AN  T PFK NS KLSS  PHIHLFQPF+  H
Sbjct: 1   MELCTRTFTSFFLFNPSSSSNPLFLRANANAKT-PFKFNSLKLSSFPPHIHLFQPFLSPH 59

Query: 63  XXX--------XXXXXXXXXXXXXXEKDRLPADLIVTETEESNSRVRLHVEVPPLVCEDC 114
                                    E+DRLPA+L VTET E NSRVRLHVEVP LVCEDC
Sbjct: 60  TSSPFTLSAASASSSSSSSSVAVGTEQDRLPAELNVTETAEPNSRVRLHVEVPSLVCEDC 119

Query: 115 YNTVIAEFTKQAKIPGFRPGKKVPESILISYVGKKNVQGATIESILKRTLSHAMESVTGR 174
           Y  VIAEF KQAKIPGFRPGKKVPESILISYVG +NVQ ATIESIL+RTLSHAM SVTGR
Sbjct: 120 YKRVIAEFMKQAKIPGFRPGKKVPESILISYVGSQNVQKATIESILRRTLSHAMTSVTGR 179

Query: 175 ALQDSVRIVTKFSDMEETYSSLGFLRYDVIVDVAPEIKWISD-NAYKNLKIVVELDSDID 233
           ALQDSVRIVTKFS+MEETYSSLG LRYDV+VD+APEIKWI D NAYKNLKIVVE+DSDID
Sbjct: 180 ALQDSVRIVTKFSEMEETYSSLGSLRYDVLVDIAPEIKWIPDNNAYKNLKIVVEIDSDID 239

Query: 234 AHKASEQVFRRRYKSTGALKVVTD 257
           AH ASEQ FRRRYKS GALKVVTD
Sbjct: 240 AHTASEQEFRRRYKSIGALKVVTD 263


>Glyma02g46430.1 
          Length = 542

 Score =  348 bits (892), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 179/261 (68%), Positives = 195/261 (74%), Gaps = 7/261 (2%)

Query: 3   MELCTQTFTRVXXXXXXXXXXXXXXXXRANTSTRPFKSNSFKLSSLTPHIHLFQPFIHHH 62
           MELCT+TFT                    N +T P K NS KLSS +PH+HLFQPF+  H
Sbjct: 1   MELCTRTFTSFLLFNPSFSPNSVFLRANPNATT-PLKFNSLKLSSFSPHVHLFQPFLSPH 59

Query: 63  XXX-----XXXXXXXXXXXXXXEKDRLPADLIVTETEESNSRVRLHVEVPPLVCEDCYNT 117
                                 E+DRLPA+L VTETEE NSRVRLHVEVP LVCEDCY  
Sbjct: 60  ISSPFTLSAAASASSSSVAVGTEQDRLPAELKVTETEEPNSRVRLHVEVPSLVCEDCYKR 119

Query: 118 VIAEFTKQAKIPGFRPGKKVPESILISYVGKKNVQGATIESILKRTLSHAMESVTGRALQ 177
           VI EF KQAKIPGFRPGKKVPE+ILISYVG +NVQ ATIESIL+RTLSHAM SVTGRALQ
Sbjct: 120 VITEFMKQAKIPGFRPGKKVPENILISYVGSQNVQKATIESILRRTLSHAMTSVTGRALQ 179

Query: 178 DSVRIVTKFSDMEETYSSLGFLRYDVIVDVAPEIKWISD-NAYKNLKIVVELDSDIDAHK 236
           DSV+IVTKFS+MEETYSSLG LRYDV+VD+APEIKWI D NAYKNLKIVVE+DSDIDAH+
Sbjct: 180 DSVQIVTKFSEMEETYSSLGSLRYDVLVDIAPEIKWIPDNNAYKNLKIVVEIDSDIDAHR 239

Query: 237 ASEQVFRRRYKSTGALKVVTD 257
           ASEQ FRRRYKS GALKVV D
Sbjct: 240 ASEQEFRRRYKSIGALKVVID 260


>Glyma14g02420.1 
          Length = 259

 Score =  281 bits (719), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 138/159 (86%), Positives = 145/159 (91%), Gaps = 1/159 (0%)

Query: 100 VRLHVEVPPLVCEDCYNTVIAEFTKQAKIPGFRPGKKVPESILISYVGKKNVQGATIESI 159
           VRLHVEVP LVCEDCY  VIAEF KQAKIPGFRPGKKVPESILISYVG +NVQ ATIESI
Sbjct: 7   VRLHVEVPSLVCEDCYKRVIAEFMKQAKIPGFRPGKKVPESILISYVGSQNVQKATIESI 66

Query: 160 LKRTLSHAMESVTGRALQDSVRIVTKFSDMEETYSSLGFLRYDVIVDVAPEIKWISD-NA 218
           L+RTLSHAM SVTGRALQ+SVRIVTKFS+MEETYSSLG L YDV+VD+APEIKWI D NA
Sbjct: 67  LRRTLSHAMTSVTGRALQESVRIVTKFSEMEETYSSLGSLGYDVLVDIAPEIKWIPDNNA 126

Query: 219 YKNLKIVVELDSDIDAHKASEQVFRRRYKSTGALKVVTD 257
           YKNLKIVVE+DSDIDAH ASEQ FRRRYKS GALKVVTD
Sbjct: 127 YKNLKIVVEMDSDIDAHTASEQEFRRRYKSIGALKVVTD 165


>Glyma14g02400.1 
          Length = 231

 Score =  230 bits (586), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 114/132 (86%), Positives = 122/132 (92%), Gaps = 1/132 (0%)

Query: 127 KIPGFRPGKKVPESILISYVGKKNVQGATIESILKRTLSHAMESVTGRALQDSVRIVTKF 186
           +IPGFRPGKKVPESILISYVG +NVQ ATIESIL+RTLSHAM SVTGRALQ+SVRIVTKF
Sbjct: 1   QIPGFRPGKKVPESILISYVGSQNVQKATIESILRRTLSHAMTSVTGRALQESVRIVTKF 60

Query: 187 SDMEETYSSLGFLRYDVIVDVAPEIKWISD-NAYKNLKIVVELDSDIDAHKASEQVFRRR 245
           S+MEETYSSLG L YDV+VD+APEIKWI D NAYKNLKIVVE+DSDIDAH ASEQ FRRR
Sbjct: 61  SEMEETYSSLGSLGYDVLVDIAPEIKWIPDNNAYKNLKIVVEMDSDIDAHTASEQEFRRR 120

Query: 246 YKSTGALKVVTD 257
           YKS GALKVVTD
Sbjct: 121 YKSIGALKVVTD 132


>Glyma14g02390.1 
          Length = 412

 Score =  149 bits (376), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 74/88 (84%), Positives = 79/88 (89%), Gaps = 1/88 (1%)

Query: 171 VTGRALQDSVRIVTKFSDMEETYSSLGFLRYDVIVDVAPEIKWISD-NAYKNLKIVVELD 229
           VTGRALQ+SVRIVT FS+MEETYSSLG L YDV+VD+APEIKWI D NAYKNLKIVVE+D
Sbjct: 225 VTGRALQESVRIVTNFSEMEETYSSLGSLGYDVLVDIAPEIKWIPDNNAYKNLKIVVEMD 284

Query: 230 SDIDAHKASEQVFRRRYKSTGALKVVTD 257
           SDIDAH ASEQ FRRRYKS GALKVV D
Sbjct: 285 SDIDAHTASEQEFRRRYKSIGALKVVGD 312