Miyakogusa Predicted Gene

Lj2g3v3149230.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3149230.1 Non Chatacterized Hit- tr|I1HSF4|I1HSF4_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,52.38,8e-19,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.40486.1
         (162 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g45930.1                                                       245   2e-65
Glyma14g02820.1                                                       238   2e-63
Glyma01g04400.1                                                       165   2e-41
Glyma02g03160.1                                                        67   1e-11

>Glyma02g45930.1 
          Length = 519

 Score =  245 bits (625), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 113/147 (76%), Positives = 131/147 (89%)

Query: 16  FKVAWFSTFLVSLTGLQVSALKSPFHPQDLLPVLPKQVSWPIMNTLHSAVDILPLYVGAA 75
            K+AW    L+    +QV ALKSPFHP+D+LP+LPKQ+SWPI+N LHSAVD+LP++VGAA
Sbjct: 1   MKIAWLLLLLLVSVSVQVWALKSPFHPRDVLPLLPKQLSWPILNRLHSAVDLLPVFVGAA 60

Query: 76  SSPNQIDEWKGACFYQNTAWMEFHNKSGSEFGGGTLHIKVSNAHSWTCLDLYIFATPYRV 135
           SSP+   +WKGACFY+N AWM FHNKSG++FGGGTLH+KVSNAHSWTC+DLYIFATPYRV
Sbjct: 61  SSPDDNLKWKGACFYENKAWMVFHNKSGTQFGGGTLHLKVSNAHSWTCMDLYIFATPYRV 120

Query: 136 TWDYYFLAREHTLEIKEWEGKAEYEYV 162
           TWDYYFLAREHTLEIKEWEGKAEYEYV
Sbjct: 121 TWDYYFLAREHTLEIKEWEGKAEYEYV 147


>Glyma14g02820.1 
          Length = 525

 Score =  238 bits (607), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 112/150 (74%), Positives = 130/150 (86%), Gaps = 3/150 (2%)

Query: 16  FKVAWFSTFL---VSLTGLQVSALKSPFHPQDLLPVLPKQVSWPIMNTLHSAVDILPLYV 72
            K+AW    L   V +T  QV ALKSPFHP+D+LP+LP+Q+SWPI+N LHSAVD+LP++V
Sbjct: 4   MKIAWLLLLLLVSVCVTASQVWALKSPFHPRDVLPLLPRQLSWPILNRLHSAVDLLPVFV 63

Query: 73  GAASSPNQIDEWKGACFYQNTAWMEFHNKSGSEFGGGTLHIKVSNAHSWTCLDLYIFATP 132
           GAA SP    +WKGACFY+N AWM FHNKSG+++GGGTLHIKVSNAHSWTC+DLYIFA+P
Sbjct: 64  GAAFSPVDNLKWKGACFYENKAWMVFHNKSGTQYGGGTLHIKVSNAHSWTCMDLYIFASP 123

Query: 133 YRVTWDYYFLAREHTLEIKEWEGKAEYEYV 162
           YRVTWDYYFLAREHTLEIKEWEGKAEYEYV
Sbjct: 124 YRVTWDYYFLAREHTLEIKEWEGKAEYEYV 153


>Glyma01g04400.1 
          Length = 518

 Score =  165 bits (417), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 77/128 (60%), Positives = 92/128 (71%), Gaps = 5/128 (3%)

Query: 35  ALKSPFHPQDLLPVLPKQVSWPIMNTLHSAVDILPLYVGAASSPNQIDEWKGACFYQNTA 94
           ALK PF   D+LPVLP  +SWP++N LHSAVD+LP +VGA +  N   +WKGACFY N A
Sbjct: 26  ALKLPFRVNDVLPVLPHGISWPLLNNLHSAVDLLPSFVGAVTPDNGSLQWKGACFYDNQA 85

Query: 95  WMEFHNKSGSEFGGGTLHIKVSNAHSWTCLDLYIFATPYRVTWDYYFLAREHTLEIKEWE 154
            +EF     +  GG  LH+K   AHSWTC+DLY+FATPYR+TWDYYF AREHTL+   WE
Sbjct: 86  SLEF-----TAPGGAVLHLKTEAAHSWTCMDLYVFATPYRITWDYYFSAREHTLQFDSWE 140

Query: 155 GKAEYEYV 162
             AE EYV
Sbjct: 141 EPAELEYV 148


>Glyma02g03160.1 
          Length = 409

 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 28/39 (71%), Positives = 32/39 (82%)

Query: 124 LDLYIFATPYRVTWDYYFLAREHTLEIKEWEGKAEYEYV 162
           +DLY+FATPYR+TWDYYF AREHTL+   WE  AE EYV
Sbjct: 1   MDLYVFATPYRITWDYYFSAREHTLKFDSWEDPAELEYV 39