Miyakogusa Predicted Gene

Lj2g3v3109780.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3109780.1 Non Chatacterized Hit- tr|G7K3E0|G7K3E0_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,55.97,0,Rad18-like CCHC zinc finger,Zinc finger, Rad18-type
putative; seg,NULL; coiled-coil,NULL,CUFF.39746.1
         (1378 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g45750.1                                                       693   0.0  
Glyma14g03080.1                                                       669   0.0  
Glyma14g03070.1                                                       236   1e-61
Glyma08g42360.1                                                       130   8e-30

>Glyma02g45750.1 
          Length = 608

 Score =  693 bits (1788), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/619 (62%), Positives = 444/619 (71%), Gaps = 34/619 (5%)

Query: 783  MIDNTFPFTSWSKGRDINSSSNPNFFGLPLNSHGELINFSSSVKVGLDQPEXXXXXXXXX 842
            MIDN+FP T W KG D NS  +PNFFGLPLNSHGELINFSSS  + ++Q +         
Sbjct: 1    MIDNSFPITGWEKGSDKNSCLDPNFFGLPLNSHGELINFSSSGDLRINQSDTSSTLRGSF 60

Query: 843  XALPIDNILHQSMQENLSINERHVVQKTFPKDGLNPFTQYSSGLAFTRLPCSEREDIHRP 902
              LPI+NILHQ+ QENLSINE HVVQKTFPKD LNPF  + + L  T L   EREDIHRP
Sbjct: 61   SGLPINNILHQNNQENLSINENHVVQKTFPKDCLNPFPHHPTRLPVTELQSREREDIHRP 120

Query: 903  KSD--FSSHYVQPLNPEL-LKQNSF-------RMQNHSGNGMVSLKEGSDHISPSSSQPT 952
             S    S HYV PLN EL  K+NSF       R++NH+GNG+VSLKE SDHISPSS+QPT
Sbjct: 121  NSSDMCSGHYVPPLNSELNRKKNSFIEQNPYNRVRNHNGNGVVSLKEDSDHISPSSNQPT 180

Query: 953  VRLMGKDVPIGRSSQEMQQFATDVWTDEESRR-HYSQYA-LENSFLGRCPKQDWVSGSSS 1010
            +RLMGKDVPIGRSSQEMQQFA DVW DEESRR +YS+YA L++S LGR  KQ+W SGS  
Sbjct: 181  MRLMGKDVPIGRSSQEMQQFAGDVWPDEESRRRNYSEYAALDHSLLGRSSKQNWASGSPL 240

Query: 1011 QVSTDNVLHSAKFQSNQG-----LMDGADSGFSQPFIDLQSNHASRNGSLGISRNSSSYF 1065
            Q+S DNVL SAK QSNQ      LM    SGFSQ FID   NH S+NGSLG++RN+SSYF
Sbjct: 241  QISADNVLQSAKIQSNQAAQSTILMSSTYSGFSQQFIDRLGNHVSQNGSLGVNRNASSYF 300

Query: 1066 NPITQDSTSYAVCNRAHEDFPERCIPGAKPPGMNCRSPVLPTPCNFDQPTCSSNRELNDR 1125
            NPITQ S+SY+V N A  DF E+ IPGAKP G+  +S VLPTP NF      +N ELND+
Sbjct: 301  NPITQKSSSYSVFNGASNDFSEQFIPGAKPLGLISQSVVLPTPGNFSHSPHVTNGELNDK 360

Query: 1126 NKNPLATKSAFGFPFLQPSVDEQAKTSWFQRPYGHLPSWLSSSPGEMLPGTFSQQFSGIR 1185
            N NP  TKSAFGFPFLQP+V+EQAKTSWF  PY   PSWLSSS  EMLPGTFS+QFS   
Sbjct: 361  NTNPHVTKSAFGFPFLQPTVNEQAKTSWFHSPYRSSPSWLSSSTDEMLPGTFSRQFSASI 420

Query: 1186 SQGFPQNQWGNNFVTPSVNHSAEVLYPSNPLTSRGPMKTSPPCPASFSHPLRPSVKSSTL 1245
            SQ FPQN WGNNF TP VNHSAEV +PSN LTS GPM+T+P  P+S  HPL   V  ST+
Sbjct: 421  SQNFPQNLWGNNFTTPFVNHSAEVRFPSNHLTSLGPMQTTPLSPSSIVHPLHFPVTPSTI 480

Query: 1246 NSGCRNINKVPDSVRLDDIITEDHHPCINTRKRPAVY--LDDSRKHVKLSSNMDVKESSG 1303
            NSG RNINKV D ++ D     +HH C NTRK PA    LDDSR       N+ V+E+  
Sbjct: 481  NSGNRNINKVADRLKFD-----EHHLCANTRKNPAAAANLDDSRL-----PNIQVQENLS 530

Query: 1304 DITRLPGENSSVELQRSTTAVELDSQVDSARSRC----GQNLNPTSYPAFDSFKMDGGTV 1359
             +TRLP E SSVELQR+T A+ELD  + SARSRC     QN NP SYPA +SFK+D   V
Sbjct: 531  RMTRLPEEKSSVELQRNTRALELDPHMGSARSRCCQHEAQNQNPGSYPAVNSFKLD-SMV 589

Query: 1360 TSGPLRLGPKRAKLILRSS 1378
            TSGP+RLGPKRAK IL SS
Sbjct: 590  TSGPVRLGPKRAKHILNSS 608


>Glyma14g03080.1 
          Length = 595

 Score =  669 bits (1726), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/625 (60%), Positives = 431/625 (68%), Gaps = 54/625 (8%)

Query: 778  VFPGSMIDNTFPFTSWSKGRDINSSSNPNFFGLPLNSHGELINFSSSVKVGLDQPEXXXX 837
            +F   MIDN+FP T W KG   NS  +P+FFGLPLNSHGELINFSSS  +G++Q +    
Sbjct: 1    MFSADMIDNSFPNTGWEKGSGKNSCLDPDFFGLPLNSHGELINFSSSGNLGMNQSDTSST 60

Query: 838  XXXXXXALPIDNILHQSMQENLSINERHVVQKTFPKDGLNPFTQYSSGLAFTRLPCSERE 897
                   LPI+NILHQS QENLSINE HVVQKTFPKDGL+PF  + + L  T L   ERE
Sbjct: 61   LRGSFSGLPINNILHQSSQENLSINENHVVQKTFPKDGLDPFPHHPTRLPVTELQSRERE 120

Query: 898  DIHRPKSD--FSSHYVQPLNPEL-LKQNSF-------RMQNHSGNGMVSLKEGSDHISPS 947
            DIHRP S    SSHYV PLN EL  K+NSF       R+ NH+GNG+VSLKEGS HISPS
Sbjct: 121  DIHRPNSSDMCSSHYVPPLNSELNCKKNSFVEQNQCDRVWNHNGNGVVSLKEGSHHISPS 180

Query: 948  SSQPTVRLMGKDVPIGRSSQEMQQFATDVWTDEES-RRHYSQY-ALENSFLGRCPKQDWV 1005
            SSQPT+RLMGKDVPIGRSSQEMQQFA DVW DEES RR+YS+Y AL++S L R  KQDWV
Sbjct: 181  SSQPTMRLMGKDVPIGRSSQEMQQFAGDVWPDEESRRRNYSEYAALDHSLLERSSKQDWV 240

Query: 1006 SGSSSQVSTDNVLHSAKFQSNQG-----LMDGADSGFSQPFIDLQSNHASRNGSLGISRN 1060
            SGS  Q+S DNVL +AK Q+NQ      LM   DSGFSQ FID QSNH       G++RN
Sbjct: 241  SGSPLQISADNVLQAAKIQNNQAAQGTILMSSTDSGFSQQFIDRQSNH-------GVNRN 293

Query: 1061 SSSYFNPITQDSTSYAVCNRAHEDFPERCIPGAKPPGMNCRSPVLPTPCNFDQPTCSSNR 1120
                           A  N A  DF E+ IPGAKP G++ +  VLPTP NF   T  +N 
Sbjct: 294  ---------------ATFNGASNDFSEQFIPGAKPLGLSSQLVVLPTPGNFSHSTHVTNG 338

Query: 1121 ELNDRNKNPLATKSAFGFPFLQPSVDEQAKTSWFQRPYGHLPSWLSSSPGEMLPGTFSQQ 1180
            ELNDRNKNP  TKSAFGFPFLQP+V+EQAKTSW+  PY   PSWLS S  EMLPGTFS+Q
Sbjct: 339  ELNDRNKNPHVTKSAFGFPFLQPTVNEQAKTSWYS-PYRSSPSWLSISTDEMLPGTFSRQ 397

Query: 1181 FSGIRSQGFPQNQWGNNFVTPSVNHSAEVLYPSNPLTSR-GPMKTSPPCPASFSHPLRPS 1239
            FS   SQ FPQN WGNNF TP VNHSAEV +PSN LTS  GPM+T+P    S  HPL   
Sbjct: 398  FSASSSQNFPQNLWGNNFTTPFVNHSAEVRFPSNHLTSSLGPMQTTPLSRVSIGHPLHVP 457

Query: 1240 VKSSTLNSGCRNINKVPDSVRLDDIITEDHHPCINTRKRPAVY--LDDSRKHVKLSSNMD 1297
            V  ST+NS   NINKV D ++ D     DH  C NTRKRPA    LDDSRK  KL  NM 
Sbjct: 458  VTPSTINSDNININKVADRLKFD-----DHQLCTNTRKRPAAAANLDDSRKPTKL-LNMR 511

Query: 1298 VKESSGDITRLPGENSSVELQRSTTAVELDSQVDSARSRC----GQNLNPTSYPAFDSFK 1353
            V+E+   +TRLPGE SSVELQR+T  +ELD  + SARSRC     QNLNP SYPA +SFK
Sbjct: 512  VQENFSRMTRLPGEKSSVELQRNTRTLELDPHMGSARSRCCQHEAQNLNPGSYPAVNSFK 571

Query: 1354 MDGGTVTSGPLRLGPKRAKLILRSS 1378
            +D G VTSGP+RLGPKRAK IL SS
Sbjct: 572  LD-GMVTSGPVRLGPKRAKHILNSS 595


>Glyma14g03070.1 
          Length = 442

 Score =  236 bits (602), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 155/348 (44%), Positives = 175/348 (50%), Gaps = 37/348 (10%)

Query: 1   MAARPDNGFSIREYTSKMRSIDVFKCWPFTSNINRELTREELQSWLPPMTLRCPRSEPLN 60
           M A   +GFSIR+YTSKMRSIDVFKCWPF S  +R+++ EE+QSWLPPM   CPRS+   
Sbjct: 1   MVAATFDGFSIRDYTSKMRSIDVFKCWPFASTSSRDVSDEEVQSWLPPMNP-CPRSDDST 59

Query: 61  HH---NKPEEPSRTRVEASRTVDVDSNEEESSKXXXXXXXXXXXXXXXXXXXXXXXXXEG 117
            H   N    PS    +     D D +  E                            + 
Sbjct: 60  DHRAQNLEIPPSAAETDED---DGDVDCSEEESAESMESEKSAPPSDSSPANNNNNNEDE 116

Query: 118 GEAMVCPVCREFNAATLTAVNAHIDGCLAQTXXXXXXXXXXXN-----LXXXXXXXXXXX 172
              MVCPVCREFNAATLTAVNAHIDGCLAQT           N                 
Sbjct: 117 KLEMVCPVCREFNAATLTAVNAHIDGCLAQTMREERRHMRIMNLKSSSSKSKPSKPLKKR 176

Query: 173 XIAEIFXXXXXXXXXXXX---------XXXLKLWPLRXXXXXXXXXXXXXXXXXXXTVRK 223
            IAEIF                        LK WP R                   TV K
Sbjct: 177 SIAEIFMVEEQPHLPQPQPQPQLPPQIESVLKFWPFR----------EGKVDDVSITVTK 226

Query: 224 FQWLSNRLEALRSSRGDRESARLNAAXXXXXXXXXXXXCPVCRDFNAATVTAVNAHIDSC 283
           F+WLS RLEALRS+R D ESA+ +              CPVCRDFNAATVTAVNAHID C
Sbjct: 227 FEWLSRRLEALRSTRVDGESAKSDQG--DISEEKMEMLCPVCRDFNAATVTAVNAHIDGC 284

Query: 284 LAQAVRDERRQIKRSFPKLK--PKAPKK--RSIAEILTAAPPIEEARK 327
           LAQAVR+ERRQ++RS    K  PK PKK  RSIAEILT APPIE  ++
Sbjct: 285 LAQAVREERRQMRRSTGNCKPIPKTPKKRSRSIAEILTVAPPIEAGKR 332


>Glyma08g42360.1 
          Length = 397

 Score =  130 bits (328), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 105/318 (33%), Positives = 136/318 (42%), Gaps = 54/318 (16%)

Query: 12  REYTSKMRSIDVFKCWPFTSNINRELTREELQSWLPPMTLRCPRSEPLNHHNKPEEPSRT 71
           R+YTSKMRS+DVFKCWPF +     L+R +++S LP      P S P       +E +  
Sbjct: 6   RDYTSKMRSVDVFKCWPFPAA---GLSRNQVESRLP------PMSTP-KLRRWSDELAEL 55

Query: 72  RVEASRTVDVDSNEEESSKXXXXXXXXXXXXXXXXXXXXXXXXXEGGEAMVCPVCREFNA 131
           R   S        EE  ++                              +VCPVC++FNA
Sbjct: 56  R---SDLAGAGGTEERLNQRYESESEKEEEDKV---------------ELVCPVCQDFNA 97

Query: 132 ATLTAVNAHIDGCLAQTXXXXXXXXXXXNLXXXXXXXXXXXXIAEIFXXXXXXXXXX--- 188
           +TLTAVNAHIDGCL +T            +            IAEIF             
Sbjct: 98  STLTAVNAHIDGCLTRTVREERQW-----MRRSKSKVPKRRSIAEIFELKEDMEEEKPLL 152

Query: 189 -XXXXXLKLWPLRXXXXXXXXXXXXXXXXXXXTVRKFQWLSNRLEALRSSRGDRESAR-- 245
                 LK  P                      V KF+WLS RLE LRS+    +S +  
Sbjct: 153 PEIDTELKRLPF---------------DEVSIMVTKFRWLSERLETLRSNGISFDSVKSV 197

Query: 246 LNAAXXXXXXXXXXXXCPVCRDFNAATVTAVNAHIDSCLAQAVRDERRQIKRSFPKLKPK 305
           +  +            CPVCR FN+ATV A N HI+ C A A+++     K S    KPK
Sbjct: 198 VGNSNSTAEEEESEMLCPVCRVFNSATVMAANTHINGCQATAMKNNELWGKPSLNNPKPK 257

Query: 306 APKKRSIAEILTAAPPIE 323
            PKKRS+A+ILT  P I+
Sbjct: 258 EPKKRSLADILTVTPQID 275



 Score = 79.0 bits (193), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 37/65 (56%), Positives = 48/65 (73%), Gaps = 4/65 (6%)

Query: 262 CPVCRDFNAATVTAVNAHIDSCLAQAVRDERRQIKRSFPKLKPKAPKKRSIAEILTAAPP 321
           CPVC+DFNA+T+TAVNAHID CL + VR+ER+ ++RS    K K PK+RSIAEI      
Sbjct: 89  CPVCQDFNASTLTAVNAHIDGCLTRTVREERQWMRRS----KSKVPKRRSIAEIFELKED 144

Query: 322 IEEAR 326
           +EE +
Sbjct: 145 MEEEK 149