Miyakogusa Predicted Gene

Lj2g3v3085360.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3085360.1 Non Chatacterized Hit- tr|I1M6Z3|I1M6Z3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.6882
PE=,90.96,0,Nol1_Nop2_Fmu,Bacterial Fmu (Sun)/eukaryotic nucleolar
NOL1/Nop2p; NOL1_NOP2_SUN,Bacterial Fmu (Sun),CUFF.39691.1
         (192 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g03400.1                                                       359   e-100
Glyma18g08310.1                                                        67   1e-11
Glyma08g44490.1                                                        66   2e-11
Glyma08g44490.2                                                        66   3e-11
Glyma02g47060.1                                                        62   3e-10
Glyma14g01690.1                                                        61   6e-10

>Glyma14g03400.1 
          Length = 381

 Score =  359 bits (922), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 171/188 (90%), Positives = 179/188 (95%)

Query: 5   GEKANGRAYQSKADIRKNMRRARNGPGRNQSVGGQVDSSKGFSPGSFDRVLLDAPCSALG 64
           G+K NG AY SKADIRKNMRRARNGPGRNQ VGG+VD SKGFSP SFDRVLLDAPCSALG
Sbjct: 194 GKKPNGGAYVSKADIRKNMRRARNGPGRNQCVGGRVDRSKGFSPDSFDRVLLDAPCSALG 253

Query: 65  LRPRLFAGEETIESLRSHAKYQRKMFDQAVQLARPGGVIVYSTCTINPGENEALVRYALD 124
           LRPRLFAGEETI+SLR+HAKYQR+MFDQAVQL RPGG+IVYSTCTINPGENEALVRYALD
Sbjct: 254 LRPRLFAGEETIQSLRNHAKYQRRMFDQAVQLVRPGGIIVYSTCTINPGENEALVRYALD 313

Query: 125 KYKYLSLAPQHPRIGGPGLVGSFEFPDGYVDEWLRPGEEDLVQRFDPSSPLDTIGFFIAK 184
           KYKYLSLAPQHPRIGGPGLVGS EFPDGY++EWLRPGEEDLVQRFDPSSPLDTIGFFIAK
Sbjct: 314 KYKYLSLAPQHPRIGGPGLVGSCEFPDGYIEEWLRPGEEDLVQRFDPSSPLDTIGFFIAK 373

Query: 185 FAVGSKDT 192
           F VGSKDT
Sbjct: 374 FLVGSKDT 381


>Glyma18g08310.1 
          Length = 620

 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 72/141 (51%), Gaps = 16/141 (11%)

Query: 51  FDRVLLDAPCSALGL--RPRLFAGEETIESLRSHAKYQRKMFDQAVQL----ARPGGVIV 104
            DRVLLDAPCS  G+  +       +++E ++  A  Q+++   A+ +    ++ GG IV
Sbjct: 375 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCAHLQKELILAAIDMVDANSKSGGYIV 434

Query: 105 YSTCTINPGENEALVRYALDKYKYLSLAPQHPRIGGPGLVGSFEFPDGYVDEWLRPGEED 164
           YSTC+I   ENEA++ YAL K + + L P     G PG          + ++   P  E 
Sbjct: 435 YSTCSIMVAENEAVIDYALKK-RDVKLVPCGLDFGRPGFT-------RFREQRFHPSLEK 486

Query: 165 LVQRFDPSSPLDTIGFFIAKF 185
             +RF P    +  GFF+AK 
Sbjct: 487 -TRRFYPHVQ-NMDGFFVAKL 505


>Glyma08g44490.1 
          Length = 614

 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 73/143 (51%), Gaps = 16/143 (11%)

Query: 49  GSFDRVLLDAPCSALGL--RPRLFAGEETIESLRSHAKYQRKMFDQAVQL----ARPGGV 102
            + DRVLLDAPCS  G+  +       +++E ++  A  Q+++   A+ +    ++ GG 
Sbjct: 369 NAVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCAHLQKELILAAIDMVDANSKSGGY 428

Query: 103 IVYSTCTINPGENEALVRYALDKYKYLSLAPQHPRIGGPGLVGSFEFPDGYVDEWLRPGE 162
           +VYSTC+I   ENE+++ YAL K + + L P     G PG          + ++   P  
Sbjct: 429 VVYSTCSIMVAENESVIDYALKK-RDVKLVPCGLDFGRPGFT-------KFREQRFHPSL 480

Query: 163 EDLVQRFDPSSPLDTIGFFIAKF 185
           E   +RF P    +  GFF+AK 
Sbjct: 481 EK-TRRFYPHVQ-NMDGFFVAKL 501


>Glyma08g44490.2 
          Length = 608

 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 73/143 (51%), Gaps = 16/143 (11%)

Query: 49  GSFDRVLLDAPCSALGL--RPRLFAGEETIESLRSHAKYQRKMFDQAVQL----ARPGGV 102
            + DRVLLDAPCS  G+  +       +++E ++  A  Q+++   A+ +    ++ GG 
Sbjct: 382 NAVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCAHLQKELILAAIDMVDANSKSGGY 441

Query: 103 IVYSTCTINPGENEALVRYALDKYKYLSLAPQHPRIGGPGLVGSFEFPDGYVDEWLRPGE 162
           +VYSTC+I   ENE+++ YAL K + + L P     G PG          + ++   P  
Sbjct: 442 VVYSTCSIMVAENESVIDYALKK-RDVKLVPCGLDFGRPGFT-------KFREQRFHPSL 493

Query: 163 EDLVQRFDPSSPLDTIGFFIAKF 185
           E   +RF P    +  GFF+AK 
Sbjct: 494 EK-TRRFYPHVQ-NMDGFFVAKL 514


>Glyma02g47060.1 
          Length = 528

 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 2/84 (2%)

Query: 52  DRVLLDAPCSALGLRPRL--FAGEETIESLRSHAKYQRKMFDQAVQLARPGGVIVYSTCT 109
           ++VLLDAPCS LG+  +       + +E +    + Q ++ D A +L +PGGV+VYSTC+
Sbjct: 408 NKVLLDAPCSGLGVLSKRADLRWNKNLEDMEQLKELQDELLDAASKLVKPGGVLVYSTCS 467

Query: 110 INPGENEALVRYALDKYKYLSLAP 133
           I+P EN+  V   L ++    + P
Sbjct: 468 IDPEENDDRVVAFLARHSDFHIDP 491


>Glyma14g01690.1 
          Length = 300

 Score = 61.2 bits (147), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 45/67 (67%), Gaps = 2/67 (2%)

Query: 52  DRVLLDAPCSALG-LRPRL-FAGEETIESLRSHAKYQRKMFDQAVQLARPGGVIVYSTCT 109
           ++VLLDAPCS LG L  R+       +E +    ++Q ++ D A +L +PGGV+VYS+C+
Sbjct: 186 NKVLLDAPCSGLGVLSKRVDLRWNRNLEDMEQLKEFQDELLDAASKLVKPGGVLVYSSCS 245

Query: 110 INPGENE 116
           I+P EN+
Sbjct: 246 IDPEEND 252