Miyakogusa Predicted Gene

Lj2g3v3084350.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3084350.2 Non Chatacterized Hit- tr|A5C0V1|A5C0V1_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,69.23,4e-17,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL; Apc5,Anaphase-promoting complex subunit 5,CUFF.39690.2
         (570 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g03420.1                                                       879   0.0  
Glyma08g26060.1                                                        65   2e-10
Glyma02g45390.1                                                        58   2e-08

>Glyma14g03420.1 
          Length = 912

 Score =  879 bits (2270), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 441/570 (77%), Positives = 469/570 (82%), Gaps = 20/570 (3%)

Query: 1   MAGILKQPGAFAVTPHKVSLCILLKIYXXXXXXXXXXXXXXXXXXXXXXXXXXHHNRLAL 60
           M GILKQPGAFA+TPHKVSLCILLKIY                           HNRL L
Sbjct: 1   MGGILKQPGAFAITPHKVSLCILLKIYAPPAQISVPFPFASVA----------QHNRLGL 50

Query: 61  FLLALTKSCDDILEPRLDELIHQLRIVSQNWEAASWVIDQLMXXXXXXXXXXXXXXXXXX 120
           FLLALTKSCDDI+EP+LDELIHQLR++SQNWEA SWVIDQLM                  
Sbjct: 51  FLLALTKSCDDIMEPKLDELIHQLRMMSQNWEA-SWVIDQLMSRLSSLSSPDDLFNFFSD 109

Query: 121 IRGILGGPDSGAVEDDQAILDMNSNLGLFLRRCILAFNLLSFEGICYLLTSIGIYTKEFS 180
           IRGILGGPDSGAVEDDQ ILDMNSNLG+FLRRC+LAFNLLSFEG+ +LLT++GIY KE S
Sbjct: 110 IRGILGGPDSGAVEDDQVILDMNSNLGIFLRRCVLAFNLLSFEGVSHLLTNLGIYCKEES 169

Query: 181 NCPPYEERSLDDSSSNLETYSEYENMDLENFVYEKVSEEIEARKEASERVPFHLHTPDTL 240
                 + +         TYSEYENMDLENFVYEKVSEEIEARKEASE VPFHLHT +TL
Sbjct: 170 QIVLPMKNT---------TYSEYENMDLENFVYEKVSEEIEARKEASEIVPFHLHTHNTL 220

Query: 241 LSLVDDIDVPADSVSKQSEKFRVASPYGDPPSNMLRDIDSSGFVSLRTNWQIQGYLQEQA 300
           LSLVDDIDVPADSVSKQSEK RVASPYGDP SNMLRD+D S  V LRTNWQ+QGYLQEQA
Sbjct: 221 LSLVDDIDVPADSVSKQSEKVRVASPYGDPSSNMLRDVDHSSPVFLRTNWQVQGYLQEQA 280

Query: 301 DTIEKNGGAVSLNGFEIILQQLQKLAPELHRVHFSSHLNGLAHDDYIAALENLHCYFDYS 360
            TIEKNG AVS NG EIIL+QLQKLAPELHRVHF S+LNGL+HDDYI+ALENLHCYFDYS
Sbjct: 281 HTIEKNGSAVSFNGLEIILRQLQKLAPELHRVHFLSYLNGLSHDDYISALENLHCYFDYS 340

Query: 361 AGTEGIDYVPPVGSNSFGRYEIGILCLGMMHFHFGHPKLALEVLTEAVRVSQQQNNDTCL 420
           AGTEG DY+P V  N FGRYEIG+LCLGMMHFHFGHPKLALEVL+EAVRVSQQQ+NDTCL
Sbjct: 341 AGTEGFDYIPSVSGNGFGRYEIGLLCLGMMHFHFGHPKLALEVLSEAVRVSQQQSNDTCL 400

Query: 421 AYTLAAISNLLFENGISSTAGILGSSYTPFTSIGIXXXXXXXXXXXXRGSLKRAENLKLK 480
           AYTLAAISNLLFENGISSTA  LGSSY+PFTSIGI            RGSLKRAE+LKLK
Sbjct: 401 AYTLAAISNLLFENGISSTAATLGSSYSPFTSIGISLSVQQQLFVLLRGSLKRAESLKLK 460

Query: 481 RLVASNHLAMAKFELTHVQRPLLSFGPKTSMKLSTCPVNVCKELRLSSHLISDFSSESSA 540
           RLVASNHLAMAKF+LTHVQRPLLSFGPKTSMKLSTCPVNVCKE+RLSSHLISDFS ESSA
Sbjct: 461 RLVASNHLAMAKFDLTHVQRPLLSFGPKTSMKLSTCPVNVCKEIRLSSHLISDFSYESSA 520

Query: 541 MTIDGAFSTAWLRNLQKPTGSLVLCQENGS 570
           MTIDGAFSTAWLRNLQKPTGSLVLCQENGS
Sbjct: 521 MTIDGAFSTAWLRNLQKPTGSLVLCQENGS 550


>Glyma08g26060.1 
          Length = 38

 Score = 65.5 bits (158), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/37 (75%), Positives = 30/37 (81%), Gaps = 1/37 (2%)

Query: 367 DYVPPVGS-NSFGRYEIGILCLGMMHFHFGHPKLALE 402
           D+VPPVG  N FGRYEI +LCL MMHFHFG PKL LE
Sbjct: 2   DFVPPVGGGNGFGRYEIDLLCLAMMHFHFGLPKLTLE 38


>Glyma02g45390.1 
          Length = 403

 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 25/27 (92%), Positives = 26/27 (96%)

Query: 1  MAGILKQPGAFAVTPHKVSLCILLKIY 27
          M GILKQPGAFA+TPHKVSLCILLKIY
Sbjct: 1  MGGILKQPGAFAITPHKVSLCILLKIY 27