Miyakogusa Predicted Gene

Lj2g3v3073970.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3073970.1 CUFF.39681.1
         (195 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g45250.1                                                        80   2e-15

>Glyma02g45250.1 
          Length = 88

 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/91 (47%), Positives = 52/91 (57%), Gaps = 3/91 (3%)

Query: 105 IIIIECRPGDHAXXXXXXXXXXXXXXXXHKPATWEDLQKLLEGYGGCTEYDVGXXXXXXX 164
           +++IECRPG+H                 HKP TWE+L+ LLEGYGGCTEYDVG       
Sbjct: 1   LLVIECRPGNH-REWRRRLEARGGGGGGHKPGTWEELETLLEGYGGCTEYDVG--DVPKL 57

Query: 165 XXXXXXXXXXEELCSAALEFIFSCAAKPPTI 195
                     EE+CSAAL+FIF+ AAKP  I
Sbjct: 58  VVDTTANLPLEEMCSAALDFIFAHAAKPTLI 88