Miyakogusa Predicted Gene

Lj2g3v3058550.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3058550.3 tr|F2QU11|F2QU11_PICP7
Chromodomain-helicase-DNA-binding protein 1 OS=Pichia pastoris (strain
ATCC 7,31.86,0.00000000001,seg,NULL; no description,NULL;
Chromo,Chromo domain,CUFF.39662.3
         (546 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g45000.1                                                       666   0.0  
Glyma14g03780.1                                                       645   0.0  
Glyma08g41490.1                                                       107   3e-23

>Glyma02g45000.1 
          Length = 1766

 Score =  666 bits (1719), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/545 (64%), Positives = 388/545 (71%), Gaps = 22/545 (4%)

Query: 1   MALFRNFSNETVSHDVIEDKSQGQNADRVHRSLGNECLDATSSEKEFVMNMEAQYESDGE 60
           MA FRNFSN+TVSH V+EDKSQGQNA+RVHRS+GN+C DATSSEKEF MNMEAQY+SDGE
Sbjct: 1   MAFFRNFSNDTVSHGVMEDKSQGQNANRVHRSVGNDCTDATSSEKEFDMNMEAQYDSDGE 60

Query: 61  PDGACRLQNEAAANDGDAIKKPNLQTTGGSKSATVRSWGSTFWKDCRPMHPQNXXXXXXX 120
           PDG+ RLQ EA A+DGDA+K+ NLQTTG SK+A V  WGSTFWKDC  M PQN       
Sbjct: 61  PDGSSRLQTEATADDGDAVKESNLQTTG-SKTAMVGRWGSTFWKDCGQMDPQNGSESGQE 119

Query: 121 XXXXXDYQNADVSEDNSLDGRAGRLDSEDDDELKEAGNGTRGHSDVPAEEMLSDEYYEQD 180
                DY+NAD SEDNSLDGRAGRLDS+DDD  KEAG G RGHSDVPAEEMLSDEYYEQD
Sbjct: 120 SKSGSDYRNADGSEDNSLDGRAGRLDSDDDDGQKEAGKGPRGHSDVPAEEMLSDEYYEQD 179

Query: 181 GDEQSDSLHYGEIHKPTGMNSWPQRMAKS-NRAMHRKSRISXXXXXXXXXXXXXXXXXXX 239
           G+EQSDSLHYG I KPTG NSWPQRM+ S NR +HR  R S                   
Sbjct: 180 GEEQSDSLHYGGIKKPTGSNSWPQRMSTSANRTLHRNLRFSDDVEDNDGEDEDDDDGDND 239

Query: 240 XXXXXX--------------------XTSGHAANKXXXXXXXXXXXXXXXXXXXXXXXXX 279
                                      TSGHAANK                         
Sbjct: 240 NDGDDADYEEEDEADEDDPDDADFEPATSGHAANKDKDWEGEGSDEDDDSDANIVVSDDD 299

Query: 280 XXFYAKKPKGRLRGKVGKSIQSTRDRKAFAPSSRQRRVKSSFXXXXXXXXXXXXXXXXXF 339
             FYAK+PKGR RGK+G++I+STR+RK +A S RQRRVKSSF                 F
Sbjct: 300 EPFYAKRPKGRQRGKIGQNIKSTRERKVYAASGRQRRVKSSFEDNESTTEDSDSDGDEDF 359

Query: 340 KNTKKRSIHVRKNNSRSSVTASFSTRNSEVRTSSRAVRKVSYVESDGSEEADEGKKKKVQ 399
           K+TKKRS+HVRKNN RSS    FS+RNSEVRTSSR VRKVSYVES+ SEEADE KKKK Q
Sbjct: 360 KSTKKRSVHVRKNNGRSSAATGFSSRNSEVRTSSRTVRKVSYVESEESEEADEAKKKKSQ 419

Query: 400 KXXXXXXXXXXXXKVLWHQPKGMAEDAQRNNRSTDPVLMSHLFDSDFDWNEMEFLIKWKG 459
           K            KVLWHQPKGMAEDAQRNNRST+PVLMSHLFDS+ DWNE+EFLIKWKG
Sbjct: 420 KEEIEEDDGDSIEKVLWHQPKGMAEDAQRNNRSTEPVLMSHLFDSEIDWNEIEFLIKWKG 479

Query: 460 QSHLHCQWKSFAELQNLSGFKKVLNYTKRIMEDIRHRKTITREEIEVNDVSKEMDLDIIK 519
           QSHLHCQWKSFAELQNLSGFKKVLNYTK+IMEDIR+R+TI+REEIEVNDVSKEMDLDIIK
Sbjct: 480 QSHLHCQWKSFAELQNLSGFKKVLNYTKKIMEDIRYRRTISREEIEVNDVSKEMDLDIIK 539

Query: 520 QNSQV 524
           QNSQV
Sbjct: 540 QNSQV 544


>Glyma14g03780.1 
          Length = 1767

 Score =  645 bits (1664), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/543 (64%), Positives = 384/543 (70%), Gaps = 20/543 (3%)

Query: 1   MALFRNFSNETVSHDVIEDKSQGQNADRVHRSLGNECLDATSSEKEFVMNMEAQYESDGE 60
           MA FRNFSN+TVSH V+EDKSQGQNA+RVHRS+GN+C DATSSEKEF MNMEAQYESDGE
Sbjct: 1   MAFFRNFSNDTVSHGVMEDKSQGQNANRVHRSVGNDCTDATSSEKEFDMNMEAQYESDGE 60

Query: 61  PDGACRLQNEAAANDGDAIKKPNLQTTGGSKSATVRSWGSTFWKDCRPMHPQNXXXXXXX 120
           PDG+ RLQ EA A+DGDA+K+ NLQTTG SK+A V  WGSTFWKDC  M PQN       
Sbjct: 61  PDGSSRLQTEATADDGDAVKESNLQTTG-SKTAMVGRWGSTFWKDCGQMDPQNGSESGQE 119

Query: 121 XXXXXDYQNADVSEDNSLDGRAGRLDSEDDDELKEAGNGTRGHSDVPAEEMLSDEYYEQD 180
                DY+NAD SEDNSLDGR  R+DS+DDD  KEAG G RGHSDVPAEEMLSDEYYEQD
Sbjct: 120 SKSGSDYRNADGSEDNSLDGRVVRVDSDDDDGQKEAGKGPRGHSDVPAEEMLSDEYYEQD 179

Query: 181 GDEQSDSLHYGEIHKPTGMNSWPQRMAKS-NRAMHRKSRISXXXXXXXXXXXXXXXXXXX 239
           G+EQSDSLHYG I KPT  NSWPQRM+ S NR +HR SR S                   
Sbjct: 180 GEEQSDSLHYGGIKKPTESNSWPQRMSTSANRTLHRNSRFSDDVEDNDGEDDDDGDNDND 239

Query: 240 XXXXXX------------------XTSGHAANKXXXXXXXXXXXXXXXXXXXXXXXXXXX 281
                                    TSGHA NK                           
Sbjct: 240 GDDADYEEEEEADEDDPDDADFEPATSGHAGNKDKDWEGEGSDDDDDSDGNIVVSDDDES 299

Query: 282 FYAKKPKGRLRGKVGKSIQSTRDRKAFAPSSRQRRVKSSFXXXXXXXXXXXXXXXXXFKN 341
           FYAK+PKGR RGK+G++I+STRDRK +  S RQRRVKSSF                 FK+
Sbjct: 300 FYAKRPKGRQRGKIGQNIKSTRDRKVYVASGRQRRVKSSFEGNESTTEDSDSDSDEDFKS 359

Query: 342 TKKRSIHVRKNNSRSSVTASFSTRNSEVRTSSRAVRKVSYVESDGSEEADEGKKKKVQKX 401
           TKKRS+HVRKNN RSS    FS+RNSE+RTSSR VRKVSYVES+ SEEADEGKKKK QK 
Sbjct: 360 TKKRSVHVRKNNGRSSAATGFSSRNSEIRTSSRTVRKVSYVESEESEEADEGKKKKSQKE 419

Query: 402 XXXXXXXXXXXKVLWHQPKGMAEDAQRNNRSTDPVLMSHLFDSDFDWNEMEFLIKWKGQS 461
                      KVLWHQPKGMAEDAQRNNRST+PVL+SHLFDS+ DWNE+EFLIKWKGQS
Sbjct: 420 EIEEDDGDSIEKVLWHQPKGMAEDAQRNNRSTEPVLLSHLFDSEIDWNEIEFLIKWKGQS 479

Query: 462 HLHCQWKSFAELQNLSGFKKVLNYTKRIMEDIRHRKTITREEIEVNDVSKEMDLDIIKQN 521
           HLHC WKSFAELQNLSGFKKVLNYTK+IMEDIR+R+TI+REEIEVNDVSKEMDLDIIKQN
Sbjct: 480 HLHCLWKSFAELQNLSGFKKVLNYTKKIMEDIRYRRTISREEIEVNDVSKEMDLDIIKQN 539

Query: 522 SQV 524
           SQV
Sbjct: 540 SQV 542


>Glyma08g41490.1 
          Length = 822

 Score =  107 bits (268), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 69/172 (40%), Positives = 96/172 (55%), Gaps = 27/172 (15%)

Query: 49  MNMEAQYESDGEPDGACRLQNEAAANDGDAIKKPNLQTTGGSKSATVRSWGSTFWKDCRP 108
           M ME QY S  EPDG+ RLQ EA  +D    ++ N++  G   +A           DC+P
Sbjct: 1   MKMEVQYGSYSEPDGS-RLQKEATTDDRVGTRESNIENMGNKTAA-----------DCQP 48

Query: 109 MHPQNXXXXXXXXXXXXDYQNADVSEDNSLDGRAGRLDSEDDDELKEAGNGTRGHSDVPA 168
           M P N                ++++ ++  D        +DDD LK++G G+ GHS +PA
Sbjct: 49  MCPPN---------------GSELAHESKKDRGESLDSEDDDDGLKDSGKGSIGHSGIPA 93

Query: 169 EEMLSDEYYEQDGDEQSDSLHYGEIHKPTGMNSWPQRMAKSNRAMHRKSRIS 220
           EEMLSDEYYEQ+G+EQS SLH   + +PTG NS PQ+M+   ++   KSRIS
Sbjct: 94  EEMLSDEYYEQNGEEQSVSLHCRVVRQPTGSNSRPQQMSSIVKSRMHKSRIS 145



 Score = 63.2 bits (152), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 39/98 (39%), Positives = 55/98 (56%), Gaps = 3/98 (3%)

Query: 282 FYAKKPKGRLRGKVGKSIQSTRDRKAFAPSSRQRRVKSSFXXX--XXXXXXXXXXXXXXF 339
           ++ KK KGR RGK+ +SI+S++DRK +  SSRQRRVK SF                   F
Sbjct: 276 YFDKKAKGRQRGKIERSIRSSKDRK-YTRSSRQRRVKPSFGDEDDESTADDSDSESDGDF 334

Query: 340 KNTKKRSIHVRKNNSRSSVTASFSTRNSEVRTSSRAVR 377
           K+ KKR  H  KNN  S+   SF  + S+ R +S+ ++
Sbjct: 335 KSIKKRGGHAHKNNCHSAAPTSFENQTSQFRNTSKDLK 372