Miyakogusa Predicted Gene

Lj2g3v3034040.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3034040.1 tr|B9HJE6|B9HJE6_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_766170 PE=4
SV=1,63.38,2e-18,4FE4S_FER_1,4Fe-4S ferredoxin, iron-sulphur binding,
conserved site; PUTATIVE UNCHARACTERIZED
PROTEI,NODE_66079_length_1171_cov_62.030743.path2.1
         (277 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g34920.1                                                       401   e-112
Glyma08g04790.1                                                       215   5e-56
Glyma05g27700.1                                                       147   2e-35
Glyma08g10680.1                                                       145   4e-35
Glyma19g22680.1                                                       137   2e-32
Glyma05g06540.1                                                       135   7e-32

>Glyma05g34920.1 
          Length = 316

 Score =  401 bits (1031), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 196/278 (70%), Positives = 219/278 (78%), Gaps = 1/278 (0%)

Query: 1   MSQVCKALRDAVNNDVLPWLNVIVERPLSSRLSDEILVKITSKANGRLKTLALMNCTHIT 60
           MSQVC +LRDAVNND+LPWLNVIV+RPLS RL+DEIL+KITSKANGRLKTLAL+NC H+T
Sbjct: 39  MSQVCTSLRDAVNNDILPWLNVIVQRPLSWRLNDEILIKITSKANGRLKTLALINCMHVT 98

Query: 61  DKGLQRVVEQNPLINKLHIPACTGITAEGVTRAVQTLCQRSNCLSTLRINGIYNLQKEHL 120
           D GLQRVV+QNPLINKLHIPACTGIT EGV  AV+TLCQRSNCL TL INGIYN+QKEHL
Sbjct: 99  DHGLQRVVQQNPLINKLHIPACTGITPEGVLGAVKTLCQRSNCLKTLSINGIYNIQKEHL 158

Query: 121 DMLAMNLRKNVPLEEQQ-MQKPNYYHKRGSFTVFSREENQRIIDLETCPKCFEVTMVYDC 179
           DML MNL KN PLEEQQ  Q+P YYH+R SF+VF +EE+ R+IDLE CP+CFEV MVYDC
Sbjct: 159 DMLIMNLGKNQPLEEQQKQQQPVYYHERCSFSVFKQEESWRLIDLEICPRCFEVRMVYDC 218

Query: 180 PKVECMKREKPQVQCRGCKFCIPRXXXXXXXXXXXXXXXXXXXXXXXXXXWLQLPKCNFC 239
           PK  C +RE P   CRGC FCIPR                          WLQLPKC+FC
Sbjct: 219 PKEHCTRREWPLAPCRGCNFCIPRCENCGGCIESGEVEEGACEDIFCLECWLQLPKCSFC 278

Query: 240 NKPYCKQHENWWCSSLDPIFLCRVCDEHSHGYTYTDVL 277
           NKPYCKQH NWWC+S D   +C+VCDE+SHGYTYTDVL
Sbjct: 279 NKPYCKQHTNWWCTSSDSSLICKVCDENSHGYTYTDVL 316


>Glyma08g04790.1 
          Length = 273

 Score =  215 bits (547), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 127/277 (45%), Positives = 157/277 (56%), Gaps = 44/277 (15%)

Query: 1   MSQVCKALRDAVNNDVLPWLNVIVERPLSSRLSDEILVKITSKANGRLKTLALMNCTHIT 60
           MSQVC +LRDAVNND+LPWLNV V+RPLS RL+D+IL+KITSKANG LKTLAL+NC H+T
Sbjct: 41  MSQVCTSLRDAVNNDILPWLNVFVQRPLSWRLNDDILIKITSKANGSLKTLALINCMHVT 100

Query: 61  DKGLQRVVEQNPLINKLHIPACTGITAEGVTRAVQTLCQRSNCLSTLRINGIYNLQKEHL 120
           D+GLQRVV+QNPLINK     C  I A               CL  L +   Y     H 
Sbjct: 101 DEGLQRVVQQNPLINK---QVCVAILA---------------CLFKLVV--AYTSMHWHN 140

Query: 121 DMLAMNLRKNVPLEEQQMQKPNYYHKRGSFTVFSREENQRIIDLETCPKCFEVTMVYDCP 180
            + +   R+N   ++Q ++            + S +    II+ + CP+CFEV MVYDCP
Sbjct: 141 PLRSSKSRENTMPKKQLLKD-----------LKSSKSLSTIIN-DICPRCFEVRMVYDCP 188

Query: 181 KVECMKREKPQVQCRGCKFCIPRXXXXXXXXXXXXXXXXXXXXXXXXXXWLQLPKCNFCN 240
           K  C +RE P   CRGC FCIP+                          WLQ+PKC+FCN
Sbjct: 189 KGHCTRREWPLAPCRGCNFCIPKCENCGGCIESGEVEEGDCEDIFCLECWLQIPKCSFCN 248

Query: 241 KPYCKQHENWWCSSLDPIFLCRVCDEHSHGYTYTDVL 277
           KPY                +C+VCDE+SHGYTYTDVL
Sbjct: 249 KPYYSS------------LICKVCDENSHGYTYTDVL 273


>Glyma05g27700.1 
          Length = 463

 Score =  147 bits (370), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 74/204 (36%), Positives = 120/204 (58%), Gaps = 5/204 (2%)

Query: 1   MSQVCKALRDAVNNDVLPWLNVIVERPLSSRLSDEILVKITSKANGRLKTLALMNCTHIT 60
           + +VCK+L   V  D L W ++ V+ PL+ R++D++L ++T++A G L+ L+L+ CT IT
Sbjct: 211 VERVCKSLHSTVCGDPLLWRSIHVDPPLNERITDDVLFQLTNRAQGHLQCLSLVECTRIT 270

Query: 61  DKGLQRVVEQNPLINKLHIPACTGITAEGVTRAVQTL-CQRSNCLSTLRINGIYNLQKEH 119
           D GL+RV++ NP + KL +P CT ++ EG+   ++      +  L  L I G+Y + ++H
Sbjct: 271 DDGLKRVLQSNPKLTKLSVPGCTRLSIEGIVGILKAYNSMGTQGLKHLHIGGLYGVTQKH 330

Query: 120 LDMLAMNLRKNVPLEEQQMQKPNYYHKRGSFTVFSREENQRIIDLETCPKCFEVTMVYDC 179
            + L+  L  + PL  Q   KP+YY +     ++   ++ R+ID+E CP C  + +VYDC
Sbjct: 331 FEELSFLLGADGPL-LQHSHKPHYYCRG---NLYLSCDDDRVIDIEVCPLCQNLRLVYDC 386

Query: 180 PKVECMKREKPQVQCRGCKFCIPR 203
           P   C   E     CR C  CIPR
Sbjct: 387 PAESCQGVEHTTQICRACTLCIPR 410


>Glyma08g10680.1 
          Length = 451

 Score =  145 bits (367), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 73/208 (35%), Positives = 125/208 (60%), Gaps = 13/208 (6%)

Query: 1   MSQVCKALRDAVNNDVLPWLNVIVERPLSSRLSDEILVKITSKANGRLKTLALMNCTHIT 60
           + +VCK+L   V  D L W ++ V++PL+ R++D++L+++T++A G L+ L+L+ CT IT
Sbjct: 199 VERVCKSLHSTVRGDPLLWRSIHVDQPLNERITDDVLLQLTNRAQGHLQCLSLVECTRIT 258

Query: 61  DKGLQRVVEQNPLINKLHIPACTGITAEGVTRAVQTLCQRSNCLST-----LRINGIYNL 115
           D GL+R++E NP + KL +P CT ++ EG+     T+ +  N + T     L I G+Y +
Sbjct: 259 DDGLKRILEGNPKLTKLSVPGCTRLSIEGIV----TILKAYNSMDTQGVKHLHIGGLYGV 314

Query: 116 QKEHLDMLAMNLRKNVPLEEQQMQKPNYYHKRGSFTVFSREENQRIIDLETCPKCFEVTM 175
            ++H + L   L  + PL     +  ++Y++RG+  ++   ++ + ID+E CP+C  + +
Sbjct: 315 TQKHFEELRFLLGADSPLLPHSHK--SHYYRRGN--LYLSCDDDQAIDIEVCPRCQNLRL 370

Query: 176 VYDCPKVECMKREKPQVQCRGCKFCIPR 203
           VYDCP   C   E     CR C  CIPR
Sbjct: 371 VYDCPAESCQGVEHTTQVCRACTLCIPR 398


>Glyma19g22680.1 
          Length = 415

 Score =  137 bits (344), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 78/204 (38%), Positives = 116/204 (56%), Gaps = 9/204 (4%)

Query: 4   VCKALRDAVNNDVLPWLNVIVERPLSSRLSDEILVKITSKANGRLKTLALMNCTHITDKG 63
           VCK+L DAV  D L W  + +++PL+ R++D+ LVK+T++A G L+ LAL+NC  ITD G
Sbjct: 158 VCKSLCDAVRGDPLLWRTMHIDQPLNERITDDSLVKLTNRAQGTLQHLALVNCLWITDSG 217

Query: 64  LQRVVEQNPLINKLHIPACTGITAEGVTRAVQTLCQRSNC-LSTLRINGIYN---LQKEH 119
           L RV++ NP + KL +P C  +T EG+   ++ L       +  LRI G+     +  + 
Sbjct: 218 LGRVLQSNPRLMKLSVPDCIRLTIEGILFNLRALKSSGKLGIKHLRIGGLAGVCHVTDQQ 277

Query: 120 LDMLAMNLRKNVPLEEQQMQKPNYYHKRGSFTVFSREENQRIIDLETCPKCFEVTMVYDC 179
            + L   L  +  L +QQ QKP +Y +    T     E+ R ID+E CP+C ++  VYDC
Sbjct: 278 FEELKELLDASKYL-QQQDQKPQFYGEYSHITC----EDDRAIDIEVCPRCEKLRPVYDC 332

Query: 180 PKVECMKREKPQVQCRGCKFCIPR 203
           P   C  + +    CRGC  CI R
Sbjct: 333 PAESCQPKHQASQLCRGCTICIAR 356


>Glyma05g06540.1 
          Length = 439

 Score =  135 bits (339), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 75/207 (36%), Positives = 117/207 (56%), Gaps = 9/207 (4%)

Query: 1   MSQVCKALRDAVNNDVLPWLNVIVERPLSSRLSDEILVKITSKANGRLKTLALMNCTHIT 60
           +  VC++L DAV  D L W  + +++PL+ R++D+ LVK+T++A G L+ LAL+NC  IT
Sbjct: 179 VEGVCRSLCDAVRGDPLLWRTMHIDQPLNERITDDTLVKLTNRAQGTLQHLALVNCLWIT 238

Query: 61  DKGLQRVVEQNPLINKLHIPACTGITAEGVTRAVQTLCQRSNC-LSTLRINGIYN---LQ 116
           D GL+RV++ NP + KL +P C  +T EG+   ++ L       +  LRI G+     + 
Sbjct: 239 DSGLRRVLQSNPRLTKLSVPDCIRLTIEGILFHLRALKSSGKLGIKHLRIGGLAGVCHVT 298

Query: 117 KEHLDMLAMNLRKNVPLEEQQMQKPNYYHKRGSFTVFSREENQRIIDLETCPKCFEVTMV 176
            +  D L   L  +  L +Q  QKP ++ +          E+ R ID+E CP+C ++  V
Sbjct: 299 DQQFDELKELLDASKYL-QQGDQKPQFFGEYSHIIC----EDDRAIDIEVCPRCKKLRPV 353

Query: 177 YDCPKVECMKREKPQVQCRGCKFCIPR 203
           YDCP   C ++ +    CRGC  CI R
Sbjct: 354 YDCPAESCQQKHQASQLCRGCTICIAR 380