Miyakogusa Predicted Gene
- Lj2g3v3034030.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v3034030.1 tr|A9S6P3|A9S6P3_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_124931,46.99,0.000000000000001,no description,Dynein
light chain, type 1/2; DLC,Dynein light chain, type 1/2;
Dynein_light,Dynein l,NODE_55810_length_989_cov_44.591507.path2.1
(133 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma05g34910.1 249 5e-67
Glyma08g04800.1 249 7e-67
Glyma02g07720.1 213 6e-56
Glyma16g26790.1 204 3e-53
Glyma17g10320.1 124 2e-29
Glyma05g01580.1 124 2e-29
Glyma17g12490.1 112 9e-26
Glyma12g35200.1 103 4e-23
Glyma13g35300.1 102 8e-23
Glyma08g00340.1 79 9e-16
Glyma15g01900.1 75 2e-14
Glyma13g43410.1 75 2e-14
Glyma15g16060.1 75 3e-14
Glyma06g42180.1 74 4e-14
Glyma09g04830.1 74 4e-14
Glyma15g16050.1 73 7e-14
Glyma08g04230.1 71 4e-13
Glyma07g16690.1 66 1e-11
>Glyma05g34910.1
Length = 133
Score = 249 bits (637), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 117/132 (88%), Positives = 126/132 (95%)
Query: 1 MEGAEEELERRSRFLKSLIQKKKVSEKQEQHDHIQNNNVRVRACDMPLLLQNRAFCCARD 60
MEGAEEELERRS+FLKSLIQKKK E+QEQHDH+Q+NNVRVRACDMPL LQ+RAF CARD
Sbjct: 1 MEGAEEELERRSKFLKSLIQKKKTIEQQEQHDHLQHNNVRVRACDMPLPLQSRAFRCARD 60
Query: 61 LLDSMPANKLDTKRLALTLKKEFDSSYGPAWHCIVGSSFGSYVTHSLGGFLYFSIDKVYI 120
LLDSMP KLD+KRLALTLKKEFDSSYGPAWHCIVG+SFGSYVTHSLGGF+YFSIDKVY+
Sbjct: 61 LLDSMPPKKLDSKRLALTLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFVYFSIDKVYV 120
Query: 121 LLFKTAVEPLDH 132
LLFKTAVEPLDH
Sbjct: 121 LLFKTAVEPLDH 132
>Glyma08g04800.1
Length = 133
Score = 249 bits (635), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 115/132 (87%), Positives = 126/132 (95%)
Query: 1 MEGAEEELERRSRFLKSLIQKKKVSEKQEQHDHIQNNNVRVRACDMPLLLQNRAFCCARD 60
MEGA+EELERRS+FLKSLIQKKK E+QEQHDH+Q+NNVRVRACDMPL LQNRAF CARD
Sbjct: 1 MEGAQEELERRSKFLKSLIQKKKTIEQQEQHDHLQHNNVRVRACDMPLPLQNRAFRCARD 60
Query: 61 LLDSMPANKLDTKRLALTLKKEFDSSYGPAWHCIVGSSFGSYVTHSLGGFLYFSIDKVYI 120
LLDSMP+ KLD+KRLALTLKKEFD+SYGPAWHCIVG+SFGSYVTHS GGF+YFSIDKVY+
Sbjct: 61 LLDSMPSKKLDSKRLALTLKKEFDTSYGPAWHCIVGTSFGSYVTHSFGGFVYFSIDKVYV 120
Query: 121 LLFKTAVEPLDH 132
LLFKTAVEPLDH
Sbjct: 121 LLFKTAVEPLDH 132
>Glyma02g07720.1
Length = 133
Score = 213 bits (541), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 104/133 (78%), Positives = 116/133 (87%), Gaps = 1/133 (0%)
Query: 1 MEGAEEELERRSRFLKSLIQKKKVSEKQEQHDHIQNNNVRVRACDMPLLLQNRAFCCARD 60
ME AE+ELERRS+FL SLIQ+KK + + +H+H + V VRACDMPL LQNRAF CAR
Sbjct: 1 MEEAEKELERRSKFLNSLIQQKKKAAIESEHEHESSLKVDVRACDMPLPLQNRAFQCARL 60
Query: 61 LLDSMP-ANKLDTKRLALTLKKEFDSSYGPAWHCIVGSSFGSYVTHSLGGFLYFSIDKVY 119
L+SMP ANKLD+KRLAL LKKEFDSSYGPAWHCIVG+SFGSYVTHS+GGFLYFSIDKVY
Sbjct: 61 YLESMPPANKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSVGGFLYFSIDKVY 120
Query: 120 ILLFKTAVEPLDH 132
ILLFKTAVEPLDH
Sbjct: 121 ILLFKTAVEPLDH 133
>Glyma16g26790.1
Length = 130
Score = 204 bits (518), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 105/133 (78%), Positives = 114/133 (85%), Gaps = 4/133 (3%)
Query: 1 MEGAEEELERRSRFLKSLIQKKKVSEKQEQHDHIQNNNVRVRACDMPLLLQNRAFCCARD 60
ME AE+ELERRS+FL SLIQKKK + EQH+H ++ V VRACDMPL LQNRA CAR
Sbjct: 1 MEEAEKELERRSKFLNSLIQKKK--KGIEQHEH-ESFKVHVRACDMPLPLQNRALQCARL 57
Query: 61 LLDSMP-ANKLDTKRLALTLKKEFDSSYGPAWHCIVGSSFGSYVTHSLGGFLYFSIDKVY 119
L+SMP NKLD KRLAL LKKEFDSSYGPAWHCIVG+SFGSYVTHS+GGFLYFSIDKVY
Sbjct: 58 HLESMPPGNKLDNKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSVGGFLYFSIDKVY 117
Query: 120 ILLFKTAVEPLDH 132
ILLFKTAVEPLDH
Sbjct: 118 ILLFKTAVEPLDH 130
>Glyma17g10320.1
Length = 259
Score = 124 bits (312), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 59/93 (63%), Positives = 72/93 (77%), Gaps = 3/93 (3%)
Query: 37 NNVRVRACDMPLLLQNRAFCCARDLLDSMPANKLDTKRLALTLKKEFDSSYGPAWHCIVG 96
N ++ + DMP +Q A CAR +DSM K +K LAL+LKKEFD YGPAWHCIVG
Sbjct: 166 NGAKMVSVDMPPFMQIHAVDCARKAIDSM--EKFTSKTLALSLKKEFDGVYGPAWHCIVG 223
Query: 97 SSFGSYVTHSLGGFLYFSID-KVYILLFKTAVE 128
+SFGS+VTHS+GGFLYFS+D K+YILLFKTAV+
Sbjct: 224 TSFGSFVTHSVGGFLYFSMDQKLYILLFKTAVQ 256
>Glyma05g01580.1
Length = 246
Score = 124 bits (312), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 59/92 (64%), Positives = 71/92 (77%), Gaps = 3/92 (3%)
Query: 37 NNVRVRACDMPLLLQNRAFCCARDLLDSMPANKLDTKRLALTLKKEFDSSYGPAWHCIVG 96
N ++ + DMP +Q A CAR +DSM K +K LAL+LKKEFD YGPAWHCIVG
Sbjct: 153 NGAKMVSVDMPPFMQIHAVDCARKAIDSM--EKFTSKTLALSLKKEFDGVYGPAWHCIVG 210
Query: 97 SSFGSYVTHSLGGFLYFSID-KVYILLFKTAV 127
+SFGS+VTHS+GGFLYFS+D K+YILLFKTAV
Sbjct: 211 TSFGSFVTHSVGGFLYFSMDKKLYILLFKTAV 242
>Glyma17g12490.1
Length = 176
Score = 112 bits (281), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 70/108 (64%), Gaps = 2/108 (1%)
Query: 21 KKKVSEKQEQHDHIQNNNVRVRACDMPLLLQNRAFCCARDLLDSMPANKLDTKRLALTLK 80
+K VS + I V+V DMP +Q AF CAR DS+ K K +A +K
Sbjct: 67 RKSVSHIETLSSVIAYLQVKVLVSDMPTFMQVHAFRCARRTYDSLE--KFSAKLIAHNIK 124
Query: 81 KEFDSSYGPAWHCIVGSSFGSYVTHSLGGFLYFSIDKVYILLFKTAVE 128
KEFD +YGP WHCIVGS+FGS+VTHS G FLYFS++ +YILLFKT V+
Sbjct: 125 KEFDKAYGPVWHCIVGSNFGSFVTHSTGCFLYFSMENLYILLFKTKVK 172
>Glyma12g35200.1
Length = 152
Score = 103 bits (258), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 66/100 (66%), Gaps = 2/100 (2%)
Query: 36 NNNVRVRACDMPLLLQNRAFCCARDL--LDSMPANKLDTKRLALTLKKEFDSSYGPAWHC 93
++NVR+++ DMP +Q A R L L P+ K +A LKKEFDS YG AWHC
Sbjct: 50 SSNVRLKSSDMPSHMQEHALRHTRSLFPLHHPPSPKPSNTLIARALKKEFDSKYGLAWHC 109
Query: 94 IVGSSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLDHP 133
++G SFGS+V+H+ GGF+YFSID + +LLFKT V + P
Sbjct: 110 VIGKSFGSFVSHTGGGFIYFSIDSLSVLLFKTEVHLVTQP 149
>Glyma13g35300.1
Length = 142
Score = 102 bits (255), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 65/98 (66%), Gaps = 2/98 (2%)
Query: 38 NVRVRACDMPLLLQNRAFCCARDL--LDSMPANKLDTKRLALTLKKEFDSSYGPAWHCIV 95
NVR+++ MPL +Q A R L L P+ K +A LKKEFDS YG AWHC++
Sbjct: 42 NVRLKSSHMPLHMQEHALRHTRSLFLLHHPPSPKPSNTLIARALKKEFDSKYGLAWHCVI 101
Query: 96 GSSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLDHP 133
G+SFGS+V+H+ GGF+YFSID + +LLFKT V + P
Sbjct: 102 GNSFGSFVSHTGGGFIYFSIDSLSVLLFKTEVHLVTQP 139
>Glyma08g00340.1
Length = 60
Score = 79.3 bits (194), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 42/48 (87%)
Query: 81 KEFDSSYGPAWHCIVGSSFGSYVTHSLGGFLYFSIDKVYILLFKTAVE 128
+EFD +YGP WHCIVGS+FGS+VTHS G FLYFS++ +YILLFKT V+
Sbjct: 9 QEFDKAYGPVWHCIVGSNFGSFVTHSTGCFLYFSMENLYILLFKTKVK 56
>Glyma15g01900.1
Length = 95
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Query: 41 VRACDMPLLLQNRAFCCARDLLDSMPANKLDTKRLALTLKKEFDSSYGPAWHCIVGSSFG 100
+ DMP +Q +A A + LD + D +A +KKEFD+ YG W C+VGSSFG
Sbjct: 8 IEDTDMPDKMQIQAMASASEALD--LYDVFDCTSIAAHIKKEFDTKYGSGWQCVVGSSFG 65
Query: 101 SYVTHSLGGFLYFSIDKVYILLFKTA 126
+ THS G F+YF+++ + L+FK A
Sbjct: 66 CFFTHSKGTFVYFTLETLNFLIFKGA 91
>Glyma13g43410.1
Length = 95
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Query: 41 VRACDMPLLLQNRAFCCARDLLDSMPANKLDTKRLALTLKKEFDSSYGPAWHCIVGSSFG 100
+ DMP +Q +A A + LD + D +A +KKEFD+ YG W C+VGSSFG
Sbjct: 8 IEDTDMPDKMQIQAMASAYEALD--LYDVFDCTSIAAHIKKEFDTKYGSGWQCVVGSSFG 65
Query: 101 SYVTHSLGGFLYFSIDKVYILLFKTA 126
+ THS G F+YF+++ + L+FK A
Sbjct: 66 CFFTHSKGTFVYFTLETLNFLIFKGA 91
>Glyma15g16060.1
Length = 118
Score = 74.7 bits (182), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 62/119 (52%), Gaps = 5/119 (4%)
Query: 9 ERRSRFLKSLIQKKKVS-EKQEQHDHIQNNNVRVRACDMPLLLQNRAFCCARDLLDSMPA 67
E + F+ +L + +KQ ++ V +++ DM +Q A A +
Sbjct: 4 EAKKNFVGALTARPTSDDQKQAPALNVPPKKVIIKSADMIPDMQKEAVDIAVAAFERYNV 63
Query: 68 NKLDTKRLALTLKKEFDSSYGPAWHCIVGSSFGSYVTHSLGGFLYFSIDKVYILLFKTA 126
K +A +KKEFD +GP WHCIVG +FGSYVTH F+YF +D+ +LLFK+
Sbjct: 64 EK----DVAEQIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 118
>Glyma06g42180.1
Length = 109
Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 53/97 (54%), Gaps = 13/97 (13%)
Query: 49 LLQNRAFCCARDLLDSMPANKLDTK-------------RLALTLKKEFDSSYGPAWHCIV 95
+L+ +A D+L +M + +D ++A +KKEFD +GP W CIV
Sbjct: 1 MLEGKAVIGETDMLQTMQQDAMDLASKALDFFDVTEAIKIARFIKKEFDRMHGPGWQCIV 60
Query: 96 GSSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLDH 132
G+ FGS+VTH G F+YF + + ILLF+ + P H
Sbjct: 61 GTDFGSFVTHCCGCFIYFCLGNLAILLFRGSAAPEAH 97
>Glyma09g04830.1
Length = 122
Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
Query: 39 VRVRACDMPLLLQNRAFCCARDLLDSMPANKLDTKRLALTLKKEFDSSYGPAWHCIVGSS 98
V +++ DM +Q A A + K +A +KKEFD +GP WHCIVG +
Sbjct: 39 VIIKSADMIPDMQKEAVDIAVAAFEKYNVEK----DVAEQIKKEFDKRHGPTWHCIVGRN 94
Query: 99 FGSYVTHSLGGFLYFSIDKVYILLFKTA 126
FGSYVTH F+YF +D+ +LLFK+
Sbjct: 95 FGSYVTHETNHFVYFYLDQKAVLLFKSG 122
>Glyma15g16050.1
Length = 122
Score = 73.2 bits (178), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 39/54 (72%)
Query: 73 KRLALTLKKEFDSSYGPAWHCIVGSSFGSYVTHSLGGFLYFSIDKVYILLFKTA 126
K +A +KKEFD +GP WHCIVG +FGSYVTH F+YF +D+ +LLFK+
Sbjct: 69 KDVAEQIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 122
>Glyma08g04230.1
Length = 93
Score = 70.9 bits (172), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 41 VRACDMPLLLQNRAFCCARDLLDSMPANKLDTKRLALTLKKEFDSSYGPAWHCIVGSSFG 100
V+ DM +Q A A LD + D +A +KKEFDS YG W C+VGS+FG
Sbjct: 8 VKETDMSTKMQIHAMASASQALD--LYDVYDCISIAAHIKKEFDSVYGNGWQCVVGSNFG 65
Query: 101 SYVTHSLGGFLYFSIDKVYILLFK 124
Y THS G F+YF++ + L+FK
Sbjct: 66 CYFTHSSGTFIYFALATLNFLIFK 89
>Glyma07g16690.1
Length = 130
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 41 VRACDMPLLLQNRAFCCARDLLDSMPANKLDTKRLALTLKKEFDSSYGPAWHCIVGSSFG 100
VR DMP +Q+ A LD+ + D + +A +K++ D +YGPAW+ +VG FG
Sbjct: 26 VRETDMPEGMQSYVMELAHQALDAHEVS--DCQSIAHFIKQKLDEAYGPAWNSVVGKDFG 83
Query: 101 SYVTHSLGGFLYFSIDKVYILLFK 124
S +TH G F++F ++ + L+FK
Sbjct: 84 SCITHLCGSFIFFRVEMMEFLIFK 107