Miyakogusa Predicted Gene
- Lj2g3v3022810.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v3022810.1 Non Chatacterized Hit- tr|I3SB95|I3SB95_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,RRM_1,RNA
recognition motif domain; RRM,RNA recognition motif domain; SUBFAMILY
NOT NAMED,NULL; PRE-,CUFF.39612.1
(125 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma02g44710.1 250 2e-67
Glyma14g04020.1 249 4e-67
Glyma19g37270.3 53 7e-08
Glyma19g37270.1 53 7e-08
Glyma19g37270.2 53 8e-08
Glyma19g38790.1 52 2e-07
Glyma13g21190.1 51 3e-07
Glyma03g36130.1 50 6e-07
Glyma19g39850.6 50 6e-07
Glyma11g13490.1 50 7e-07
Glyma19g39850.7 50 7e-07
Glyma19g39850.8 50 7e-07
Glyma19g39850.4 50 7e-07
Glyma19g39850.5 50 7e-07
Glyma19g39850.1 50 7e-07
Glyma19g39850.3 50 7e-07
Glyma19g39850.2 50 7e-07
Glyma19g39850.9 50 8e-07
Glyma20g38060.1 49 9e-07
Glyma19g39850.11 49 1e-06
Glyma20g38060.2 49 1e-06
Glyma03g37240.3 49 1e-06
Glyma03g37240.2 49 1e-06
Glyma19g39850.10 49 1e-06
Glyma14g14170.1 49 1e-06
Glyma03g37240.1 49 2e-06
Glyma12g05490.1 47 5e-06
>Glyma02g44710.1
Length = 124
Score = 250 bits (638), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 121/123 (98%), Positives = 121/123 (98%)
Query: 1 MATISLRKGNTRLPPEVNRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTTKDTRGTA 60
MA ISLRKGNTRLPPEVNRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGT KDTRGTA
Sbjct: 1 MAAISLRKGNTRLPPEVNRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTNKDTRGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQAKMSKKFDQKKKEDEIARMQEKYGVS 120
FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQAKMSKKFDQKKKEDEIARMQEKYGVS
Sbjct: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQAKMSKKFDQKKKEDEIARMQEKYGVS 120
Query: 121 TKD 123
TKD
Sbjct: 121 TKD 123
>Glyma14g04020.1
Length = 124
Score = 249 bits (637), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 120/123 (97%), Positives = 121/123 (98%)
Query: 1 MATISLRKGNTRLPPEVNRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTTKDTRGTA 60
MA ISLRKGNTRLPPEVNRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGT KDTRGTA
Sbjct: 1 MAAISLRKGNTRLPPEVNRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTNKDTRGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQAKMSKKFDQKKKEDEIARMQEKYGVS 120
F+VYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQAKMSKKFDQKKKEDEIARMQEKYGVS
Sbjct: 61 FIVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQAKMSKKFDQKKKEDEIARMQEKYGVS 120
Query: 121 TKD 123
TKD
Sbjct: 121 TKD 123
>Glyma19g37270.3
Length = 632
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 21 LYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTTKD--TRGTAFVVYEDIYDAKTAVDHLS 78
L+V+NLP +I + + DIF KYG I ++ T++D ++G FV +E +K A++ L+
Sbjct: 102 LFVKNLPESIDNAGLQDIFKKYGNILSSKVVTSEDGKSKGYGFVQFESEESSKVAIEKLN 161
Query: 79 GFNVANRYLIV 89
G+ VA++ L V
Sbjct: 162 GYTVADKELYV 172
>Glyma19g37270.1
Length = 636
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 21 LYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTTKD--TRGTAFVVYEDIYDAKTAVDHLS 78
L+V+NLP +I + + DIF KYG I ++ T++D ++G FV +E +K A++ L+
Sbjct: 102 LFVKNLPESIDNAGLQDIFKKYGNILSSKVVTSEDGKSKGYGFVQFESEESSKVAIEKLN 161
Query: 79 GFNVANRYLIV 89
G+ VA++ L V
Sbjct: 162 GYTVADKELYV 172
>Glyma19g37270.2
Length = 572
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 21 LYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTTKD--TRGTAFVVYEDIYDAKTAVDHLS 78
L+V+NLP +I + + DIF KYG I ++ T++D ++G FV +E +K A++ L+
Sbjct: 102 LFVKNLPESIDNAGLQDIFKKYGNILSSKVVTSEDGKSKGYGFVQFESEESSKVAIEKLN 161
Query: 79 GFNVANRYLIV 89
G+ VA++ L V
Sbjct: 162 GYTVADKELYV 172
>Glyma19g38790.1
Length = 317
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 21 LYVRNLPFNITSEEMYDIFGKYGAIRQIRI---GTTKDTRGTAFVVYEDIYDAKTAVDHL 77
LYV NLP++IT+ E+ ++FG+ G + + I T +RG AFV + DAK A+
Sbjct: 110 LYVGNLPYSITNSELGELFGEAGTVASVEIVYDRVTDRSRGFAFVTMGSVEDAKEAIRMF 169
Query: 78 SGFNVANRYLIVLYYQQAKMSKKF 101
G V R + V + + K ++
Sbjct: 170 DGSQVGGRTVKVNFPEVPKGGERL 193
>Glyma13g21190.1
Length = 495
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 63/113 (55%), Gaps = 13/113 (11%)
Query: 6 LRKGNTRLPPEVNRV--LYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTTKD----TRGT 59
+RKG+ LP + LY++NL +IT + + F +G I I + +KD ++G
Sbjct: 176 VRKGDRILPGYDAKYTNLYIKNLDSDITEALLQEKFSSFGKI--ISLAISKDDNGLSKGF 233
Query: 60 AFVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQAK-----MSKKFDQKKKE 107
AFV YE+ DAK A++ ++G ++YL V Q+ + ++F++K+KE
Sbjct: 234 AFVNYENPDDAKKAMEAMNGLQFGSKYLYVARAQKKAEREQILHRQFEEKRKE 286
>Glyma03g36130.1
Length = 314
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 21 LYVRNLPFNITSEEMYDIFGKYGAIRQIRIG---TTKDTRGTAFVVYEDIYDAKTAVDHL 77
LYV NLP++IT+ + ++FG+ G + + I T +RG AFV ++ DAK A+
Sbjct: 107 LYVGNLPYSITNSALAELFGEAGTVASVEIMYDRVTDRSRGFAFVTMGNVEDAKEAIRMF 166
Query: 78 SGFNVANRYLIVLYYQQAKMSKKF 101
G V R + V + + K ++
Sbjct: 167 DGSQVGGRTVKVNFPEVPKGGERL 190
>Glyma19g39850.6
Length = 313
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%)
Query: 18 NRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTTKDTRGTAFVVYEDIYDAKTAVDHL 77
+R +YV NLP +I E+ D+F KYG I I + G AFV +ED DA+ A+
Sbjct: 6 SRTVYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGR 65
Query: 78 SGFNVANRYLIV 89
G++ L V
Sbjct: 66 DGYDFDGHRLRV 77
>Glyma11g13490.1
Length = 942
Score = 49.7 bits (117), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 6 LRKGNTRLPPEVNRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTTKDTRGTAFVVYE 65
+R + PP N L+V NL ++T ++ ++F KYGA+ + T+ R AFV ++
Sbjct: 8 MRDFDESAPPSNN--LWVGNLAADVTDADLMELFAKYGALDSV---TSYSARSYAFVFFK 62
Query: 66 DIYDAKTAVDHLSGFNVANRYLIVLYYQQAKMSKKF 101
+ DAK A + L G ++ L + + + AK K+
Sbjct: 63 RVEDAKAAKNALQGTSLRGSSLKIEFARPAKACKQL 98
>Glyma19g39850.7
Length = 309
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%)
Query: 18 NRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTTKDTRGTAFVVYEDIYDAKTAVDHL 77
+R +YV NLP +I E+ D+F KYG I I + G AFV +ED DA+ A+
Sbjct: 6 SRTVYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGR 65
Query: 78 SGFNVANRYLIV 89
G++ L V
Sbjct: 66 DGYDFDGHRLRV 77
>Glyma19g39850.8
Length = 310
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%)
Query: 18 NRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTTKDTRGTAFVVYEDIYDAKTAVDHL 77
+R +YV NLP +I E+ D+F KYG I I + G AFV +ED DA+ A+
Sbjct: 6 SRTVYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGR 65
Query: 78 SGFNVANRYLIV 89
G++ L V
Sbjct: 66 DGYDFDGHRLRV 77
>Glyma19g39850.4
Length = 302
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%)
Query: 18 NRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTTKDTRGTAFVVYEDIYDAKTAVDHL 77
+R +YV NLP +I E+ D+F KYG I I + G AFV +ED DA+ A+
Sbjct: 6 SRTVYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGR 65
Query: 78 SGFNVANRYLIV 89
G++ L V
Sbjct: 66 DGYDFDGHRLRV 77
>Glyma19g39850.5
Length = 308
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%)
Query: 18 NRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTTKDTRGTAFVVYEDIYDAKTAVDHL 77
+R +YV NLP +I E+ D+F KYG I I + G AFV +ED DA+ A+
Sbjct: 6 SRTVYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGR 65
Query: 78 SGFNVANRYLIV 89
G++ L V
Sbjct: 66 DGYDFDGHRLRV 77
>Glyma19g39850.1
Length = 313
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%)
Query: 18 NRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTTKDTRGTAFVVYEDIYDAKTAVDHL 77
+R +YV NLP +I E+ D+F KYG I I + G AFV +ED DA+ A+
Sbjct: 6 SRTVYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGR 65
Query: 78 SGFNVANRYLIV 89
G++ L V
Sbjct: 66 DGYDFDGHRLRV 77
>Glyma19g39850.3
Length = 309
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%)
Query: 18 NRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTTKDTRGTAFVVYEDIYDAKTAVDHL 77
+R +YV NLP +I E+ D+F KYG I I + G AFV +ED DA+ A+
Sbjct: 6 SRTVYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGR 65
Query: 78 SGFNVANRYLIV 89
G++ L V
Sbjct: 66 DGYDFDGHRLRV 77
>Glyma19g39850.2
Length = 301
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%)
Query: 18 NRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTTKDTRGTAFVVYEDIYDAKTAVDHL 77
+R +YV NLP +I E+ D+F KYG I I + G AFV +ED DA+ A+
Sbjct: 6 SRTVYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGR 65
Query: 78 SGFNVANRYLIV 89
G++ L V
Sbjct: 66 DGYDFDGHRLRV 77
>Glyma19g39850.9
Length = 285
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%)
Query: 18 NRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTTKDTRGTAFVVYEDIYDAKTAVDHL 77
+R +YV NLP +I E+ D+F KYG I I + G AFV +ED DA+ A+
Sbjct: 6 SRTVYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGR 65
Query: 78 SGFNVANRYLIV 89
G++ L V
Sbjct: 66 DGYDFDGHRLRV 77
>Glyma20g38060.1
Length = 271
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%)
Query: 18 NRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTTKDTRGTAFVVYEDIYDAKTAVDHL 77
+R +YV NLP ++ E+ D+F KYG I I + G AFV +ED DA+ A+ +
Sbjct: 6 SRTIYVGNLPGDVRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAEDAIQYR 65
Query: 78 SGFN 81
G+N
Sbjct: 66 DGYN 69
>Glyma19g39850.11
Length = 303
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%)
Query: 18 NRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTTKDTRGTAFVVYEDIYDAKTAVDHL 77
+R +YV NLP +I E+ D+F KYG I I + G AFV +ED DA+ A+
Sbjct: 6 SRTVYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGR 65
Query: 78 SGFNVANRYLIV 89
G++ L V
Sbjct: 66 DGYDFDGHRLRV 77
>Glyma20g38060.2
Length = 265
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%)
Query: 18 NRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTTKDTRGTAFVVYEDIYDAKTAVDHL 77
+R +YV NLP ++ E+ D+F KYG I I + G AFV +ED DA+ A+ +
Sbjct: 6 SRTIYVGNLPGDVRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAEDAIQYR 65
Query: 78 SGFN 81
G+N
Sbjct: 66 DGYN 69
>Glyma03g37240.3
Length = 298
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%)
Query: 18 NRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTTKDTRGTAFVVYEDIYDAKTAVDHL 77
+R +YV NLP +I E+ D+F KYG I I + G AFV +ED DA+ A+
Sbjct: 6 SRTVYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGR 65
Query: 78 SGFNVANRYLIV 89
G++ L V
Sbjct: 66 DGYDFDGHRLRV 77
>Glyma03g37240.2
Length = 295
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%)
Query: 18 NRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTTKDTRGTAFVVYEDIYDAKTAVDHL 77
+R +YV NLP +I E+ D+F KYG I I + G AFV +ED DA+ A+
Sbjct: 6 SRTVYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGR 65
Query: 78 SGFNVANRYLIV 89
G++ L V
Sbjct: 66 DGYDFDGHRLRV 77
>Glyma19g39850.10
Length = 313
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%)
Query: 18 NRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTTKDTRGTAFVVYEDIYDAKTAVDHL 77
+R +YV NLP +I E+ D+F KYG I I + G AFV +ED DA+ A+
Sbjct: 6 SRTVYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGR 65
Query: 78 SGFNVANRYLIV 89
G++ L V
Sbjct: 66 DGYDFDGHRLRV 77
>Glyma14g14170.1
Length = 591
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 21 LYVRNLPFNITSEEMYDIFGKYGAIRQIRI----GTTKDTRGTAFVVYEDIYDAKTAVDH 76
++V +PFN+T ++ +F KYG + + + GT K ++G AF+ YED AVD+
Sbjct: 38 VFVGGIPFNLTEGDLLAVFAKYGEVVDVNLVRDKGTGK-SKGFAFLAYEDQRSTNLAVDN 96
Query: 77 LSGFNVANRYLIV 89
L+G V R + V
Sbjct: 97 LNGAQVLGRIIRV 109
>Glyma03g37240.1
Length = 299
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%)
Query: 18 NRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTTKDTRGTAFVVYEDIYDAKTAVDHL 77
+R +YV NLP +I E+ D+F KYG I I + G AFV +ED DA+ A+
Sbjct: 6 SRTVYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGR 65
Query: 78 SGFNVANRYLIV 89
G++ L V
Sbjct: 66 DGYDFDGHRLRV 77
>Glyma12g05490.1
Length = 850
Score = 47.0 bits (110), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 10/104 (9%)
Query: 21 LYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTTKDTRGTAFVVYEDIYDAKTAVDHLSGF 80
L+V NL ++T ++ ++F KYGA+ + T+ R AFV ++ + DAK A + L G
Sbjct: 21 LWVGNLAADVTDADLMELFAKYGALDSV---TSYSARSYAFVFFKRVEDAKAAKNALQGT 77
Query: 81 NVANRYLIVLYYQQAKMSKKF------DQKKKEDEIARMQEKYG 118
++ L + + + AK K+ KED A Q K+G
Sbjct: 78 SLRGSSLKIEFARPAKACKQLWVGGISQAVTKEDLEAEFQ-KFG 120