Miyakogusa Predicted Gene

Lj2g3v3022770.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3022770.1 Non Chatacterized Hit- tr|F6HA93|F6HA93_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,44.83,3e-19,seg,NULL; AvrRpt-cleavage,Pathogenic type III effector
avirulence factor Avr cleavage site,CUFF.39625.1
         (116 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g06090.1                                                       115   8e-27
Glyma02g44700.1                                                       108   1e-24
Glyma05g31770.2                                                        55   2e-08
Glyma08g15010.1                                                        55   2e-08
Glyma06g15190.1                                                        52   1e-07
Glyma05g31770.1                                                        52   2e-07
Glyma04g39680.1                                                        51   3e-07
Glyma08g15010.2                                                        51   3e-07
Glyma04g39680.2                                                        50   5e-07

>Glyma15g06090.1 
          Length = 98

 Score =  115 bits (289), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 70/111 (63%), Gaps = 13/111 (11%)

Query: 6   KKHGVTTVPQFGGWDQSAPGATDYSMVFTQARAKKKQQKIDLTDIKRHSLGNEREFINAN 65
           ++  + +VPQFGGWDQ APGATDYSMVFTQARA KKQQK +LT+IK  SLGNER+  NA 
Sbjct: 1   QRPAMMSVPQFGGWDQKAPGATDYSMVFTQARANKKQQKTNLTEIKHRSLGNERDIANA- 59

Query: 66  RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEPIVMGKKRILTYINCCIRP 116
                                         EEP+V+GKK+ILTY+NCCIRP
Sbjct: 60  ------------KHGKAHHHHHVHGHSHAHEEPLVVGKKKILTYVNCCIRP 98


>Glyma02g44700.1 
          Length = 105

 Score =  108 bits (271), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 52/107 (48%), Positives = 66/107 (61%), Gaps = 12/107 (11%)

Query: 10  VTTVPQFGGWDQSAPGATDYSMVFTQARAKKKQQKIDLTDIKRHSLGNEREFINANRXXX 69
           V +VPQFGGWDQ+ PGA DY+++FTQAR  KK QK +L +I+R S G+ER+F+N+N    
Sbjct: 6   VMSVPQFGGWDQNEPGAIDYTVMFTQARENKKHQKANLIEIRRKSFGSERDFVNSNH--- 62

Query: 70  XXXXXXXXXXXXXXXXXXXXXXXXXXEEPIVMGKKRILTYINCCIRP 116
                                     E+ +VMGKKRILTYINCCIRP
Sbjct: 63  ---------GRAPRHHVRSHTHSHAHEDHVVMGKKRILTYINCCIRP 100


>Glyma05g31770.2 
          Length = 102

 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 16/116 (13%)

Query: 1   MEQVQKKHG-VTTVPQFGGWDQSAPGATDYSMVFTQARAKKKQQKIDLTDIKRHSLGNER 59
           M++ ++K+G   +VPQFG WDQ      DYS+ F++ R  +KQ K   T+I R SLGNE 
Sbjct: 1   MDRRKEKNGPWLSVPQFGDWDQKG-QVPDYSLDFSKIRETRKQNK---TNISRASLGNEE 56

Query: 60  EFINANRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEPIVMGKKRILTYINCCIR 115
           EF+++                                      +K  L+Y NCC++
Sbjct: 57  EFMDSTTSSSVNTGHSSEHPQPHYHQTNSP-----------TARKSFLSYFNCCVK 101


>Glyma08g15010.1 
          Length = 102

 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 46/104 (44%), Gaps = 15/104 (14%)

Query: 12  TVPQFGGWDQSAPGATDYSMVFTQARAKKKQQKIDLTDIKRHSLGNEREFINANRXXXXX 71
           +VPQFG WDQ      DYS+ F++ R  +KQ K   T+I R SLGNE EF+++       
Sbjct: 13  SVPQFGDWDQKG-QVPDYSLDFSKIRETRKQNK---TNISRASLGNEEEFMDS------- 61

Query: 72  XXXXXXXXXXXXXXXXXXXXXXXXEEPIVMGKKRILTYINCCIR 115
                                     P    +K  L+Y NCC++
Sbjct: 62  --TTSSSVNTAHSSEHPQPHYHQTHSPT--ARKSFLSYFNCCVK 101


>Glyma06g15190.1 
          Length = 102

 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 16/116 (13%)

Query: 1   MEQVQKKHG-VTTVPQFGGWDQSAPGATDYSMVFTQARAKKKQQKIDLTDIKRHSLGNER 59
           MEQ ++K+    +VPQFG WDQ      DYS+ F++ R  +KQ K   T+I R SLGNE 
Sbjct: 1   MEQSKEKNAPWLSVPQFGDWDQKG-QVPDYSLDFSKIREMRKQNK---TNISRASLGNEE 56

Query: 60  EFINANRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEPIVMGKKRILTYINCCIR 115
           E + ++                                P    ++  L+Y NCCI+
Sbjct: 57  ELMASS---------ATNNTSTVHSDDHQHPHYHQTNSPTT--RRSFLSYFNCCIK 101


>Glyma05g31770.1 
          Length = 129

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/65 (44%), Positives = 43/65 (66%), Gaps = 5/65 (7%)

Query: 1  MEQVQKKHG-VTTVPQFGGWDQSAPGATDYSMVFTQARAKKKQQKIDLTDIKRHSLGNER 59
          M++ ++K+G   +VPQFG WDQ      DYS+ F++ R  +KQ K   T+I R SLGNE 
Sbjct: 1  MDRRKEKNGPWLSVPQFGDWDQKG-QVPDYSLDFSKIRETRKQNK---TNISRASLGNEE 56

Query: 60 EFINA 64
          EF+++
Sbjct: 57 EFMDS 61


>Glyma04g39680.1 
          Length = 101

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 49/116 (42%), Gaps = 17/116 (14%)

Query: 1   MEQVQKKHG-VTTVPQFGGWDQSAPGATDYSMVFTQARAKKKQQKIDLTDIKRHSLGNER 59
           MEQ ++K+    +VPQFG WDQ      DYS+ F++ R  +KQ K   T+I R SLGNE 
Sbjct: 1   MEQSKEKNAPWLSVPQFGDWDQKG-QVPDYSLDFSKIRETRKQNK---TNISRASLGNEE 56

Query: 60  EFINANRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEPIVMGKKRILTYINCCIR 115
           E                                     P    ++  L+Y NCC++
Sbjct: 57  ELT----------ASATNNANTVHSDEHQHPHYNQTNSPT--SRRSFLSYFNCCVK 100


>Glyma08g15010.2 
          Length = 96

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/53 (49%), Positives = 35/53 (66%), Gaps = 4/53 (7%)

Query: 12 TVPQFGGWDQSAPGATDYSMVFTQARAKKKQQKIDLTDIKRHSLGNEREFINA 64
          +VPQFG WDQ      DYS+ F++ R  +KQ K   T+I R SLGNE EF+++
Sbjct: 13 SVPQFGDWDQKG-QVPDYSLDFSKIRETRKQNK---TNISRASLGNEEEFMDS 61


>Glyma04g39680.2 
          Length = 100

 Score = 50.1 bits (118), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 38/62 (61%), Gaps = 5/62 (8%)

Query: 1  MEQVQKKHG-VTTVPQFGGWDQSAPGATDYSMVFTQARAKKKQQKIDLTDIKRHSLGNER 59
          MEQ ++K+    +VPQFG WDQ      DYS+ F++ R  +KQ K   T+I R SLGNE 
Sbjct: 1  MEQSKEKNAPWLSVPQFGDWDQKG-QVPDYSLDFSKIRETRKQNK---TNISRASLGNEE 56

Query: 60 EF 61
          E 
Sbjct: 57 EL 58