Miyakogusa Predicted Gene

Lj2g3v3018610.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3018610.1 CUFF.39727.1
         (88 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g44600.1                                                       133   5e-32
Glyma14g04120.1                                                       132   9e-32
Glyma14g04120.2                                                       130   2e-31
Glyma02g44600.2                                                       115   1e-26

>Glyma02g44600.1 
          Length = 113

 Score =  133 bits (334), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 66/88 (75%), Positives = 71/88 (80%), Gaps = 1/88 (1%)

Query: 1  MDESEFQRLLQLFPVVRSRDYCAETXXXXXXXXXXAQDEELKEWQDAWDERDRDFENRGI 60
          MDE+EFQRLLQLFPVVRSRDY AE           AQ+E LKEWQDAWDERD+DFE +GI
Sbjct: 1  MDEAEFQRLLQLFPVVRSRDYTAEATSSRQIASGSAQNE-LKEWQDAWDERDKDFEKQGI 59

Query: 61 TKHDSFWSKLKSEAARKVGTEEAERFCK 88
           + DSFWSKLKSEAARKVG EEAERFCK
Sbjct: 60 NQQDSFWSKLKSEAARKVGAEEAERFCK 87


>Glyma14g04120.1 
          Length = 113

 Score =  132 bits (332), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 65/88 (73%), Positives = 71/88 (80%), Gaps = 1/88 (1%)

Query: 1  MDESEFQRLLQLFPVVRSRDYCAETXXXXXXXXXXAQDEELKEWQDAWDERDRDFENRGI 60
          MDE+EFQRLLQLFPVVRSRDY AE           AQ+E +KEWQDAWDERD+DFE +GI
Sbjct: 1  MDEAEFQRLLQLFPVVRSRDYTAEASSSKQIASGSAQNE-VKEWQDAWDERDKDFEKQGI 59

Query: 61 TKHDSFWSKLKSEAARKVGTEEAERFCK 88
           + DSFWSKLKSEAARKVG EEAERFCK
Sbjct: 60 NQQDSFWSKLKSEAARKVGAEEAERFCK 87


>Glyma14g04120.2 
          Length = 100

 Score =  130 bits (328), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 65/88 (73%), Positives = 71/88 (80%), Gaps = 1/88 (1%)

Query: 1  MDESEFQRLLQLFPVVRSRDYCAETXXXXXXXXXXAQDEELKEWQDAWDERDRDFENRGI 60
          MDE+EFQRLLQLFPVVRSRDY AE           AQ+E +KEWQDAWDERD+DFE +GI
Sbjct: 1  MDEAEFQRLLQLFPVVRSRDYTAEASSSKQIASGSAQNE-VKEWQDAWDERDKDFEKQGI 59

Query: 61 TKHDSFWSKLKSEAARKVGTEEAERFCK 88
           + DSFWSKLKSEAARKVG EEAERFCK
Sbjct: 60 NQQDSFWSKLKSEAARKVGAEEAERFCK 87


>Glyma02g44600.2 
          Length = 93

 Score =  115 bits (288), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 58/81 (71%), Positives = 63/81 (77%), Gaps = 1/81 (1%)

Query: 1  MDESEFQRLLQLFPVVRSRDYCAETXXXXXXXXXXAQDEELKEWQDAWDERDRDFENRGI 60
          MDE+EFQRLLQLFPVVRSRDY AE           AQ+E LKEWQDAWDERD+DFE +GI
Sbjct: 1  MDEAEFQRLLQLFPVVRSRDYTAEATSSRQIASGSAQNE-LKEWQDAWDERDKDFEKQGI 59

Query: 61 TKHDSFWSKLKSEAARKVGTE 81
           + DSFWSKLKSEAARKV  E
Sbjct: 60 NQQDSFWSKLKSEAARKVNEE 80