Miyakogusa Predicted Gene
- Lj2g3v3007580.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v3007580.1 Non Chatacterized Hit- tr|G7L1E6|G7L1E6_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,38.46,7e-19,no
description,Cupredoxin; Cupredoxins,Cupredoxin;
PHYTOCYANIN,Plastocyanin-like; seg,NULL; Cu_bind_,CUFF.39595.1
(245 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma02g44580.1 294 6e-80
Glyma14g04140.1 288 5e-78
Glyma18g45710.1 96 2e-20
Glyma09g40300.1 87 2e-17
Glyma20g10230.1 61 1e-09
Glyma18g05810.1 58 8e-09
Glyma17g12150.1 54 1e-07
Glyma08g22680.1 52 6e-07
Glyma06g25630.1 49 3e-06
>Glyma02g44580.1
Length = 234
Score = 294 bits (753), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 153/246 (62%), Positives = 171/246 (69%), Gaps = 13/246 (5%)
Query: 1 MEQGRRXXXXXXXXXXXXXXXXXIFCFSGSVEAYKNYTVGDSLGWFDNLEKPHVNYQKWV 60
ME+GRR +FC SGS EAYKNYTVGDSLGWFDN EK +VNYQKW
Sbjct: 1 MERGRRSSSFGPMSSTVPCFLLLLFCLSGSAEAYKNYTVGDSLGWFDNTEKSNVNYQKWA 60
Query: 61 ANKEFSLGDFLIFNTDTNHTVVQTYNFTTYKQCDYNDAQDKDTTQWSSSDPSNTEIHPVT 120
+KEFSLGDFLIFN+DTNH+VVQTYNFTTYK+CDY+DAQDKDTTQWS+SDPSNT+ HPVT
Sbjct: 61 DSKEFSLGDFLIFNSDTNHSVVQTYNFTTYKECDYDDAQDKDTTQWSASDPSNTQTHPVT 120
Query: 121 AAVPLVKEGMNYFFSSDYDGDQCKNGQHFKINVTYGQGLPKSLRXXXXXXXXXXXXXXGD 180
AVPLVKEGM YFFS DYDGDQCK+GQHFKINVTYGQGLPKSL+ GD
Sbjct: 121 VAVPLVKEGMTYFFSGDYDGDQCKSGQHFKINVTYGQGLPKSLK-SPEDAPSPASPVAGD 179
Query: 181 DDAAPDTIVPSNFSHPXXXXXXXXXXXXXXXXXXXXXXXXXXXMYAQLHNKLYVALILLG 240
DD+APDTIVPSNFSHP M+AQLH ++LLG
Sbjct: 180 DDSAPDTIVPSNFSHP-----KEENDDDKASDDQKSSSSVSILMHAQLH------IVLLG 228
Query: 241 I-IFMF 245
I +F+F
Sbjct: 229 ILLFLF 234
>Glyma14g04140.1
Length = 237
Score = 288 bits (736), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 153/247 (61%), Positives = 171/247 (69%), Gaps = 12/247 (4%)
Query: 1 MEQGRRXXXX-XXXXXXXXXXXXXIFCFSGSVEAYKNYTVGDSLGWFDNLEKPHVNYQKW 59
MEQGRR +FC SGS EAYKNYTVGDSLGWFDN EK +VNYQKW
Sbjct: 1 MEQGRRRRSSFGPMSSTIPCLLLLLFCLSGSAEAYKNYTVGDSLGWFDNTEKSNVNYQKW 60
Query: 60 VANKEFSLGDFLIFNTDTNHTVVQTYNFTTYKQCDYNDAQDKDTTQWSSSDPSNTEIHPV 119
+KEFSLGDFLIFNTDTNH+VVQTYNFTTYK+CDY+DAQDKDTTQWS++DPSNT+ HPV
Sbjct: 61 ADSKEFSLGDFLIFNTDTNHSVVQTYNFTTYKECDYDDAQDKDTTQWSAADPSNTQTHPV 120
Query: 120 TAAVPLVKEGMNYFFSSDYDGDQCKNGQHFKINVTYGQGLPKSLRXXXXXXXXXXXXXXG 179
T +VPLVKEGM YFFS DYDGDQCK+GQHFKINVTYGQGLPKSL+ G
Sbjct: 121 TVSVPLVKEGMTYFFSGDYDGDQCKSGQHFKINVTYGQGLPKSLK-SPEDAPSPASPVAG 179
Query: 180 DDDAAPDTIVPSNFSHPXXXXXXXXXXXXXXXXXXXXXXXXXXXMYAQLHNKLYVALILL 239
DD++APDTIVPSNFSHP MYAQLH ++LL
Sbjct: 180 DDESAPDTIVPSNFSHP---KEESDDDKASDSDKQKSSSSISISMYAQLH------IVLL 230
Query: 240 GI-IFMF 245
GI +F+F
Sbjct: 231 GILLFLF 237
>Glyma18g45710.1
Length = 209
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 73/138 (52%), Gaps = 5/138 (3%)
Query: 24 IFCFSGSVEAYKNYTVGDSLGW--FDNLEKPHVNYQKWVANKEFSLGDFLIFNTDTNHTV 81
I S + Y N+TVG + GW NY W + + F LGD+L+FNT++N TV
Sbjct: 16 ITVVSAAETGYHNHTVGGAAGWSFNSTTNTTATNYSSWASTQTFDLGDYLVFNTNSNQTV 75
Query: 82 VQTYNFTTYKQCDYNDAQDKDTTQWSSSDPSNTEIHPVTAAVPLVKEGMNYFFSSDYDGD 141
VQTYN TTY C A D D + + S +T AVPL G NYFFS DG
Sbjct: 76 VQTYNKTTYLNC---TAYDSDNGTFVYNGGSRGFGEALTVAVPLTIVGPNYFFSDAGDGV 132
Query: 142 QCKNGQHFKINVTYGQGL 159
QC++G F+I V G GL
Sbjct: 133 QCQHGLAFEIAVLRGLGL 150
>Glyma09g40300.1
Length = 199
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 64/125 (51%), Gaps = 5/125 (4%)
Query: 24 IFCFSGSVEAYKNYTVGDSLGWFDN--LEKPHVNYQKWVANKEFSLGDFLIFNTDTNHTV 81
+ S + Y N+TVG GW N NY W + + F LGD+LIFNT++N TV
Sbjct: 16 VTAVSAAETGYHNHTVGGGTGWSFNSTTNTSATNYSSWASTQTFDLGDYLIFNTNSNQTV 75
Query: 82 VQTYNFTTYKQCDYNDAQDKDTTQWSSSDPSNTEIHPVTAAVPLVKEGMNYFFSSDYDGD 141
VQTYN TTY C D D T ++ E +T VPL G NYFFS DG
Sbjct: 76 VQTYNKTTYLNCT-ADYSDNGTFVYNGGSRGFGE--ALTVVVPLTIVGPNYFFSDAGDGV 132
Query: 142 QCKNG 146
QC+ G
Sbjct: 133 QCQRG 137
>Glyma20g10230.1
Length = 96
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 76 DTNHTVVQTYNFTTYKQCDYNDAQDKDTTQWSSSDPSNTEIHPVTAAVPLVKEGMNYFFS 135
++N TVVQTYN TTY C D D T ++ E +T VPL G+NYFFS
Sbjct: 2 NSNQTVVQTYNKTTYLNCT-TDYSDNGTFVYNGGSRGFREA--LTFIVPLTIAGLNYFFS 58
Query: 136 SDYDGDQCKNGQHFKINVTYGQGLPKSL 163
G QC+ F+I+V G GLP SL
Sbjct: 59 DAGGGVQCQRSLAFEIDVQRGLGLPPSL 86
>Glyma18g05810.1
Length = 96
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 73 FNTDTNHTVVQTYNFTTYKQCDYNDAQDKDTTQWSSSDPSNTEIHPVTAAVPLVKEGMNY 132
FNT++N TVVQTY+ TY C D D T ++ E + VPL G NY
Sbjct: 1 FNTNSNQTVVQTYDKMTYLNC-IADYSDNGTFVYNGESCGFGEA--LVVVVPLTIVGPNY 57
Query: 133 FFSSDYDGDQCKNGQHFKINVTYGQGLPKSLR 164
FF +G QC++ F+I+V +G GLP SL
Sbjct: 58 FFFDADNGVQCQHNLAFEIDVQHGLGLPPSLN 89
>Glyma17g12150.1
Length = 203
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 54/129 (41%), Gaps = 22/129 (17%)
Query: 28 SGSVEAYKNYTVGDSLGWFDNLEKPHVNYQKWVANKEFSLGDFLIFNTDTNHTVVQTYNF 87
SGSV YTVG++ GW + Y W + K F +GD L+FN +N V+
Sbjct: 45 SGSV----TYTVGETAGWI--VPGNASFYPAWASAKNFKVGDILVFNYPSNAHNVEEVTK 98
Query: 88 TTYKQCDYNDAQDKDTTQWSSSDPSNTEIHPVTAAVPLVKEGMNYFFSSDYDGDQCKNGQ 147
Y C SS+ P T P A VPL K G +Y+ C GQ
Sbjct: 99 ANYDSC-------------SSASPIATFTTP-PARVPLSKSGEHYYICG--IPGHCLGGQ 142
Query: 148 HFKINVTYG 156
INVT G
Sbjct: 143 KLSINVTGG 151
>Glyma08g22680.1
Length = 172
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 32 EAYKNYTVGDSLGWFDNLEKPHVNYQKWVANKEFSLGDFLIFNTDTN-HTVVQTYNFTTY 90
EA +Y VGD GW + + YQ W ++K F++GD L F T H V++ +Y
Sbjct: 24 EAQTSYVVGDGTGW--RVPQDASTYQNWASDKNFTVGDTLSFIFQTGLHNVIEVSE-ESY 80
Query: 91 KQCDYNDAQDKDTTQWSSSDPSNTEIHPVTAAVPLVKEGMNYFFSSDYDGDQCKNGQHFK 150
C SS++P T + A V L + G +Y+ S G+ C NGQ
Sbjct: 81 NSC-------------SSANPIGTTYNTGPANVTLNRGGEHYYICS--FGNHCNNGQRLA 125
Query: 151 INVT 154
I V+
Sbjct: 126 ITVS 129
>Glyma06g25630.1
Length = 100
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 84 TYNFTTYKQCDYNDAQDKDTTQWSSSDPSNTEIHPVTAAVPLVKEGMNYFFSSDYDGDQC 143
TYN TTY C N + D + + S+ +T VPL G NYFFS D QC
Sbjct: 1 TYNKTTYLNCTTNYS---DNGTFVYNGRSHGFGEALTIVVPLTIVGPNYFFSDAGDDVQC 57
Query: 144 KNGQHFKINVTYGQGLPKSL 163
+ G F+I+V G GLP SL
Sbjct: 58 QRGLAFEIDVQRGLGLPSSL 77