Miyakogusa Predicted Gene

Lj2g3v2972740.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2972740.2 Non Chatacterized Hit- tr|B6T0J3|B6T0J3_MAIZE
Putative uncharacterized protein OS=Zea mays PE=4
SV=1,80.7,2e-17,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.39556.2
         (161 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g44180.1                                                       234   3e-62
Glyma14g04600.1                                                       231   4e-61

>Glyma02g44180.1 
          Length = 226

 Score =  234 bits (597), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 121/161 (75%), Positives = 132/161 (81%), Gaps = 5/161 (3%)

Query: 1   MANTIAGEETVHKLASLLLVFLGGSYVLLFFMGKGGHSHSHNQPMEKMAVAGLILVPALS 60
           MANTIAGEETVHK+ASLLLVFLGGSY++LF MGKGGHSHSHNQPMEKMAVAGLILVPALS
Sbjct: 71  MANTIAGEETVHKVASLLLVFLGGSYIMLFLMGKGGHSHSHNQPMEKMAVAGLILVPALS 130

Query: 61  PCATTLPVFLAVGSSSSMMVLAIIVLLFSTISVMTSLVALSFYGASQLKFHWVERYDKXX 120
           PCATTLPVFLAVG+SSSMMVLAIIVLLFSTI+VMTSLVALSFYGASQLKFHWVERYDK  
Sbjct: 131 PCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKFHWVERYDKLL 190

Query: 121 XXXXXXXXXXXXXIFXXXXXXXXXGKVGSVGEHIHRKLISL 161
                        +F          +  ++G+H HRK+ISL
Sbjct: 191 VGSVLCLVGILTLLFHDHDH-----EAVTIGQHSHRKIISL 226


>Glyma14g04600.1 
          Length = 228

 Score =  231 bits (588), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 123/163 (75%), Positives = 132/163 (80%), Gaps = 7/163 (4%)

Query: 1   MANTIAGEETVHKLASLLLVFLGGSYVLLFFMGKGGHSHSHNQPMEKMAVAGLILVPALS 60
           MANTIAGEETVHK+ASLLLVFLGGSY++LF MGKGGHSHSHNQPMEKMAVAGLILVPALS
Sbjct: 71  MANTIAGEETVHKVASLLLVFLGGSYIILFLMGKGGHSHSHNQPMEKMAVAGLILVPALS 130

Query: 61  PCATTLPVFLAVGSSSSMMVLAIIVLLFSTISVMTSLVALSFYGASQLKFHWVERYDKXX 120
           PCATTLPVFLAVG+SSSMMVLAIIVLLFSTI+VMTSLVALSFYGASQLKFHWVERYDK  
Sbjct: 131 PCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKFHWVERYDKLL 190

Query: 121 XXXXXXXXXXXXXIFXXXXXXXXXGKVGSVGE--HIHRKLISL 161
                        +F          +V S+G   H HRK+ISL
Sbjct: 191 VGSVLCLVGVLTLLFHDHDH-----EVVSIGHHSHSHRKIISL 228