Miyakogusa Predicted Gene

Lj2g3v2972740.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2972740.1 Non Chatacterized Hit- tr|B6T0J3|B6T0J3_MAIZE
Putative uncharacterized protein OS=Zea mays PE=4
SV=1,80.7,2e-17,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL,CUFF.39556.1
         (223 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g44180.1                                                       354   5e-98
Glyma14g04600.1                                                       351   4e-97

>Glyma02g44180.1 
          Length = 226

 Score =  354 bits (908), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 177/188 (94%), Positives = 184/188 (97%)

Query: 1   MAGFTAEDLSTIGGIATVSILHSFIPTHWLPFSIVGRAQKWTLSRTLLVTALGAILHVIS 60
           M GFTAEDLSTIGGIATVS+LHSFIPTHWLPFSIVGRAQKWTLS TL+VTALGAILHVIS
Sbjct: 1   MGGFTAEDLSTIGGIATVSLLHSFIPTHWLPFSIVGRAQKWTLSTTLIVTALGAILHVIS 60

Query: 61  TSLLGITAINMANTIAGEETVHKLASLLLVFLGGSYVLLFFMGKGGHSHSHNQPMEKMAV 120
           TSLLGITAI MANTIAGEETVHK+ASLLLVFLGGSY++LF MGKGGHSHSHNQPMEKMAV
Sbjct: 61  TSLLGITAITMANTIAGEETVHKVASLLLVFLGGSYIMLFLMGKGGHSHSHNQPMEKMAV 120

Query: 121 AGLILVPALSPCATTLPVFLAVGSSSSMMVLAIIVLLFSTISVMTSLVALSFYGASQLKF 180
           AGLILVPALSPCATTLPVFLAVG+SSSMMVLAIIVLLFSTI+VMTSLVALSFYGASQLKF
Sbjct: 121 AGLILVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKF 180

Query: 181 HWVERYDK 188
           HWVERYDK
Sbjct: 181 HWVERYDK 188


>Glyma14g04600.1 
          Length = 228

 Score =  351 bits (900), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 176/188 (93%), Positives = 183/188 (97%)

Query: 1   MAGFTAEDLSTIGGIATVSILHSFIPTHWLPFSIVGRAQKWTLSRTLLVTALGAILHVIS 60
           M G TAEDLSTIGGIATVS+LHSFIPTHWLPFSIVGRAQKWTLS TL+VTALGAILHVIS
Sbjct: 1   MGGLTAEDLSTIGGIATVSLLHSFIPTHWLPFSIVGRAQKWTLSTTLIVTALGAILHVIS 60

Query: 61  TSLLGITAINMANTIAGEETVHKLASLLLVFLGGSYVLLFFMGKGGHSHSHNQPMEKMAV 120
           TSLLGITAI MANTIAGEETVHK+ASLLLVFLGGSY++LF MGKGGHSHSHNQPMEKMAV
Sbjct: 61  TSLLGITAITMANTIAGEETVHKVASLLLVFLGGSYIILFLMGKGGHSHSHNQPMEKMAV 120

Query: 121 AGLILVPALSPCATTLPVFLAVGSSSSMMVLAIIVLLFSTISVMTSLVALSFYGASQLKF 180
           AGLILVPALSPCATTLPVFLAVG+SSSMMVLAIIVLLFSTI+VMTSLVALSFYGASQLKF
Sbjct: 121 AGLILVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKF 180

Query: 181 HWVERYDK 188
           HWVERYDK
Sbjct: 181 HWVERYDK 188