Miyakogusa Predicted Gene

Lj2g3v2937480.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2937480.1 tr|I1JIP3|I1JIP3_SOYBN KRR1 small subunit
processome component OS=Glycine max PE=3 SV=1,87.3,0,Eukaryotic type
KH-domain (KH-domain type I),NULL; no description,NULL; HIV-1 REV
BINDING PROTEIN 2,,CUFF.39531.1
         (376 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g44060.1                                                       556   e-158
Glyma14g05010.1                                                       556   e-158
Glyma09g06500.1                                                        97   3e-20
Glyma03g07940.1                                                        92   6e-19
Glyma16g07610.1                                                        63   6e-10

>Glyma02g44060.1 
          Length = 389

 Score =  556 bits (1434), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 287/371 (77%), Positives = 310/371 (83%), Gaps = 2/371 (0%)

Query: 8   NGATNE--APKENTKRXXXXXXXXXXXXXXNIDRWKVEKFDPSWNEGGMVEVSSFSTLFP 65
           NG  NE  A ++  KR              NID WK+EKFDPSWN+GGM+EVSSFSTLFP
Sbjct: 9   NGVANESQALEQKEKRKGKHDKPKPWDDDPNIDHWKIEKFDPSWNDGGMLEVSSFSTLFP 68

Query: 66  QYREKYLQEAWPLVKSSLKEFGVSCELNLVEGSMTVSTTRKTRDPYIIVKARDLIKLLSR 125
           QYREKYLQEAWP+VKS+LKEFGV+CELNLVEGSMTVSTTRKTRDPYII+KARDLIKLLSR
Sbjct: 69  QYREKYLQEAWPMVKSALKEFGVACELNLVEGSMTVSTTRKTRDPYIIIKARDLIKLLSR 128

Query: 126 SVPAPQAIKILDDEVQCDIIKISGMVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILV 185
           S+PAPQAIKILDDE+QCDIIKISGMVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILV
Sbjct: 129 SLPAPQAIKILDDEMQCDIIKISGMVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILV 188

Query: 186 QGNTVSAMGSFKGLKQVRRIVEECMLNKLHPVYNIKILMMKKELEKDPALAQENWDRFLP 245
           QGNTV+AMGSFKGLKQVRRIVEECMLNK+HPVYNIK+LMMKKELEKDPALAQENWDRFLP
Sbjct: 189 QGNTVAAMGSFKGLKQVRRIVEECMLNKMHPVYNIKVLMMKKELEKDPALAQENWDRFLP 248

Query: 246 XXXXXXXXXXXXXXXXXXXXXXXXXXXXLSKEDEQLLTGEYFMSDKRKSAKKWQERQEKQ 305
                                        SK D QL TGEYF+S+KRKSAK WQE+QEKQ
Sbjct: 249 KFKKKNVKQKKVNTKQKKPYTPFPPPQQPSKIDIQLETGEYFLSNKRKSAKIWQEKQEKQ 308

Query: 306 AEKTAENKRKRDEAFIPPKEPAKPLDKSEDANDNVADMAMSLKKKAKKFGERKSGENVDA 365
           AEKTAENKRKR+EAFIPPKEPA  +DKSEDAN NVADMAMSLKKK KKFG+RKS EN++A
Sbjct: 309 AEKTAENKRKREEAFIPPKEPANLVDKSEDANSNVADMAMSLKKKTKKFGKRKSEENINA 368

Query: 366 EAYIMGSSEQA 376
           E YI+GSSEQA
Sbjct: 369 ETYIIGSSEQA 379


>Glyma14g05010.1 
          Length = 389

 Score =  556 bits (1433), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 280/341 (82%), Positives = 302/341 (88%)

Query: 36  NIDRWKVEKFDPSWNEGGMVEVSSFSTLFPQYREKYLQEAWPLVKSSLKEFGVSCELNLV 95
           NID WK++KFDPSWN+GGM+EVSSFSTLFPQYREKYLQEAWP+VKSSLKEFGV+CELNLV
Sbjct: 39  NIDHWKIDKFDPSWNDGGMLEVSSFSTLFPQYREKYLQEAWPMVKSSLKEFGVACELNLV 98

Query: 96  EGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKILDDEVQCDIIKISGMVRNKE 155
           EGSMTVSTTRKTRDPYII+KARDLIKLLSRS+PAPQAIKILDDE+QCDIIKISGMVRNKE
Sbjct: 99  EGSMTVSTTRKTRDPYIIIKARDLIKLLSRSIPAPQAIKILDDEMQCDIIKISGMVRNKE 158

Query: 156 RFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVSAMGSFKGLKQVRRIVEECMLNKLH 215
           RFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTV+AMGSFKGLKQVRRIVEECMLNK+H
Sbjct: 159 RFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEECMLNKMH 218

Query: 216 PVYNIKILMMKKELEKDPALAQENWDRFLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLS 275
           PVYNIK+LMMKKELEKDPALAQENWDRFLP                             S
Sbjct: 219 PVYNIKVLMMKKELEKDPALAQENWDRFLPKFKKKNVKQKKVNTKQKKPYTPFPPPQQPS 278

Query: 276 KEDEQLLTGEYFMSDKRKSAKKWQERQEKQAEKTAENKRKRDEAFIPPKEPAKPLDKSED 335
           K D QL TGEYF+S+KRKSAK WQE+QEKQAEKTAENKRKR+EAFIPPKEPA  +DKSED
Sbjct: 279 KIDIQLETGEYFLSNKRKSAKIWQEKQEKQAEKTAENKRKREEAFIPPKEPANLVDKSED 338

Query: 336 ANDNVADMAMSLKKKAKKFGERKSGENVDAEAYIMGSSEQA 376
           AN+NVADMA+SLKKK KKFG+RKS EN+DAE YI+GSSEQA
Sbjct: 339 ANNNVADMAISLKKKTKKFGKRKSEENIDAETYIVGSSEQA 379


>Glyma09g06500.1 
          Length = 77

 Score = 97.1 bits (240), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 50/66 (75%), Positives = 57/66 (86%), Gaps = 2/66 (3%)

Query: 313 KRKRDEAFIPPKEPAKPLDKSEDANDNVADMAMSLK--KKAKKFGERKSGENVDAEAYIM 370
           KRKR+EAFIPPKEPA  +DKSEDAN NVADMAMSLK  K+ KKFG+RKS E ++AE YI+
Sbjct: 2   KRKREEAFIPPKEPANLVDKSEDANSNVADMAMSLKVNKQTKKFGKRKSEEIINAETYII 61

Query: 371 GSSEQA 376
           GSSEQA
Sbjct: 62  GSSEQA 67


>Glyma03g07940.1 
          Length = 68

 Score = 92.4 bits (228), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 51/67 (76%), Gaps = 12/67 (17%)

Query: 187 GNTVSAMGSFKGLKQVRRIVEECMLNKL------------HPVYNIKILMMKKELEKDPA 234
           GNTV+AMGSFKGLKQVRRIVEECMLNKL            H   + ++LMMKKELEKDPA
Sbjct: 1   GNTVAAMGSFKGLKQVRRIVEECMLNKLPLWCRFWPKKICHFFSHCQVLMMKKELEKDPA 60

Query: 235 LAQENWD 241
           LAQENWD
Sbjct: 61  LAQENWD 67


>Glyma16g07610.1 
          Length = 50

 Score = 62.8 bits (151), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 32/48 (66%), Positives = 35/48 (72%)

Query: 77  PLVKSSLKEFGVSCELNLVEGSMTVSTTRKTRDPYIIVKARDLIKLLS 124
           PLV     +F   C+   VEGSMTVSTTRKTRDPYII+K RDL KLLS
Sbjct: 1   PLVSIQNPKFAFDCDNAQVEGSMTVSTTRKTRDPYIIIKTRDLTKLLS 48