Miyakogusa Predicted Gene

Lj2g3v2926410.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2926410.2 Non Chatacterized Hit- tr|F6HTF0|F6HTF0_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,63.16,8e-19,seg,NULL; coiled-coil,NULL; DUF2052,Protein of unknown
function DUF2052, coiled-coil,CUFF.39506.2
         (203 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g05610.1                                                       246   1e-65
Glyma17g15920.1                                                        70   1e-12

>Glyma05g05610.1 
          Length = 317

 Score =  246 bits (628), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 130/201 (64%), Positives = 138/201 (68%), Gaps = 9/201 (4%)

Query: 3   GRYFSEEAMREREPYLHHEYVGRFQDQSGRGMARPGERWSETLLRRCEEAELVAKIRGEQ 62
           G YFSEEAMREREPYLHHEYVGRFQDQSGR MARPGERWSETL+RRCEEA LVAKIRGEQ
Sbjct: 126 GHYFSEEAMREREPYLHHEYVGRFQDQSGRRMARPGERWSETLMRRCEEAALVAKIRGEQ 185

Query: 63  QRMGVAERDWVGNEGFQQQXXXXXXXXXXXXXXXXXXXXXXXGERTSGGVTALPVERDMN 122
           QRMGV ERDWVGNE FQ++                        ER        PVER +N
Sbjct: 186 QRMGVPERDWVGNERFQEEEEEEEEEEEEEEEEKEEEVVLDE-ERRRISSNGQPVERHLN 244

Query: 123 QPDVTDNAPXXXXXXXXXXXXXXXXXXDRMNQFAYIMQQKFLLGEDHEYLDYAKIDNDET 182
           + D T  +                   DRMNQF YIMQQKFLLGEDHE+ DY+KIDNDET
Sbjct: 245 EADPTKVS--------EEPTLSAEELEDRMNQFTYIMQQKFLLGEDHEHQDYSKIDNDET 296

Query: 183 LDDHWQREANIDAEERYFADD 203
           LDDHWQREANIDAEERYFADD
Sbjct: 297 LDDHWQREANIDAEERYFADD 317


>Glyma17g15920.1 
          Length = 223

 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 31/36 (86%), Positives = 33/36 (91%)

Query: 150 DRMNQFAYIMQQKFLLGEDHEYLDYAKIDNDETLDD 185
           DRMNQF YIMQQKFLLG+DHE+LDY KIDNDE LDD
Sbjct: 173 DRMNQFTYIMQQKFLLGKDHEHLDYTKIDNDEALDD 208