Miyakogusa Predicted Gene

Lj2g3v2925120.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2925120.1 Non Chatacterized Hit- tr|I1KMB5|I1KMB5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.35863
PE,93.94,0,RNA-binding domain, RBD,NULL; DNA-DAMAGE REPAIR PROTEIN
DRT111,NULL; no
description,Nucleotide-bindi,
NODE_53912_length_841_cov_97.587395.path1.1
         (162 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g35050.1                                                       237   4e-63
Glyma20g02910.1                                                       206   6e-54

>Glyma07g35050.1 
          Length = 384

 Score =  237 bits (604), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 120/146 (82%), Positives = 123/146 (84%), Gaps = 3/146 (2%)

Query: 20  ITTPLMAKKTDRRAGVIVNASDN---SKKVKSVNFNGVPTRVLLLRNMXXXXXXXXXXXX 76
           ITTPLMAKKTDRRAGVIVNASDN   SKKVKSVNFNGVPTRVLLLRNM            
Sbjct: 239 ITTPLMAKKTDRRAGVIVNASDNNSSSKKVKSVNFNGVPTRVLLLRNMVGPGEVDDELED 298

Query: 77  XXXXXCAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALIDLDGRFFGGRVV 136
                CAKYG VTRVLIFEITEPNFPV EAVRIFVQFERSEETTKAL+DLDGR+FGGRVV
Sbjct: 299 EVGSECAKYGIVTRVLIFEITEPNFPVHEAVRIFVQFERSEETTKALVDLDGRYFGGRVV 358

Query: 137 RATFYDEDKFGKNELAPMPGEIPGFT 162
           RATFYDE+KF KNELAPMPGEIPGFT
Sbjct: 359 RATFYDEEKFSKNELAPMPGEIPGFT 384


>Glyma20g02910.1 
          Length = 392

 Score =  206 bits (525), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 113/148 (76%), Positives = 118/148 (79%), Gaps = 5/148 (3%)

Query: 20  ITTPLMAKKTDRRAGVIVNASDNSKKVKSVN-----FNGVPTRVLLLRNMXXXXXXXXXX 74
           ITTPLMAKKTDRRAGVIVNASDN+    S       FNGVPTRVLLLRNM          
Sbjct: 245 ITTPLMAKKTDRRAGVIVNASDNNNSSSSKKVKSVNFNGVPTRVLLLRNMVGPGEVDDEL 304

Query: 75  XXXXXXXCAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALIDLDGRFFGGR 134
                  CAKYGTVTRVLIFEITEPNFPV EAVRIFVQFERSEETTKAL+DLDGR+FGGR
Sbjct: 305 EDEVGSECAKYGTVTRVLIFEITEPNFPVHEAVRIFVQFERSEETTKALVDLDGRYFGGR 364

Query: 135 VVRATFYDEDKFGKNELAPMPGEIPGFT 162
           VVRA+FYDE+KF KNELAPMPGEIPGFT
Sbjct: 365 VVRASFYDEEKFSKNELAPMPGEIPGFT 392