Miyakogusa Predicted Gene

Lj2g3v2905080.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2905080.2 Non Chatacterized Hit- tr|B9SUJ2|B9SUJ2_RICCO
Structural maintenance of chromosome, putative OS=Rici,92.78,0,P-loop
containing nucleoside triphosphate hydrolases,NULL; no
description,NULL; seg,NULL; SMC_N,RecF,CUFF.39507.2
         (268 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g04930.1                                                       460   e-130
Glyma02g43970.1                                                       430   e-121
Glyma13g27210.1                                                       122   3e-28
Glyma12g36520.1                                                       121   7e-28
Glyma13g05430.1                                                        80   2e-15
Glyma19g02680.1                                                        71   1e-12

>Glyma14g04930.1 
          Length = 1216

 Score =  460 bits (1184), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 232/283 (81%), Positives = 237/283 (83%), Gaps = 20/283 (7%)

Query: 6   IVIEGFKSYREQIATETFSPKVNCVVGANGSGKTNFFHAIRFVLSDLFQNLRSEDRHALL 65
           +VIEGFKSYREQIATE FS KVNCVVGANGSGKTNFFHAIRFVLSDLFQNLR EDR ALL
Sbjct: 1   VVIEGFKSYREQIATEPFSSKVNCVVGANGSGKTNFFHAIRFVLSDLFQNLRGEDRQALL 60

Query: 66  HEGAGHQVLSAFVEIVFDNSDNRIPVDKEEVRLRRTIGLKKDEYFLDGKHITKTEVMNLL 125
           HEGAGHQVLSAFVEIVFDNSDNRIPVDKEEVRLRRTIG KKDEYFLDGKHITKTEVMNLL
Sbjct: 61  HEGAGHQVLSAFVEIVFDNSDNRIPVDKEEVRLRRTIGFKKDEYFLDGKHITKTEVMNLL 120

Query: 126 ESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQET--- 182
           ESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIM ET   
Sbjct: 121 ESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMHETGNK 180

Query: 183 -----------------GNKRKQIIQVVQYXXXXXXXXXXXXXXXXXYQQLDKQRKSLEY 225
                            GNKRKQIIQVVQY                 YQQLDKQRKSLEY
Sbjct: 181 LKKSSKIRPIFLYQGVKGNKRKQIIQVVQYLDERLKELDEEKEELRKYQQLDKQRKSLEY 240

Query: 226 AIYNKEVQDAQQKLIEIEEARNKVSETSSKMYNDVLDAHEKSK 268
           AIY+KEVQDAQQKL EIE+AR KVS+TS+K YNDVLDAHEKSK
Sbjct: 241 AIYSKEVQDAQQKLTEIEDARTKVSDTSAKKYNDVLDAHEKSK 283


>Glyma02g43970.1 
          Length = 1176

 Score =  430 bits (1105), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 210/242 (86%), Positives = 217/242 (89%)

Query: 27  VNCVVGANGSGKTNFFHAIRFVLSDLFQNLRSEDRHALLHEGAGHQVLSAFVEIVFDNSD 86
           +NC+ GANGSGKTNFFHAIRFVLSDLFQNLR EDR ALLHEGAGHQVLSAFVEIVFDNSD
Sbjct: 3   LNCIFGANGSGKTNFFHAIRFVLSDLFQNLRGEDRQALLHEGAGHQVLSAFVEIVFDNSD 62

Query: 87  NRIPVDKEEVRLRRTIGLKKDEYFLDGKHITKTEVMNLLESAGFSRSNPYYVVQQGKIAS 146
           NRIPVDKEEVRLRRTIG KKDEYFLDGKHITKTEVMNLLESAGFSRSNPYYVVQQGKIAS
Sbjct: 63  NRIPVDKEEVRLRRTIGFKKDEYFLDGKHITKTEVMNLLESAGFSRSNPYYVVQQGKIAS 122

Query: 147 LTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQETGNKRKQIIQVVQYXXXXXXXXXXX 206
           LTLMKDSERLDLLKEIGGTRVYEERRRESLKIM ETGNKRKQIIQVVQY           
Sbjct: 123 LTLMKDSERLDLLKEIGGTRVYEERRRESLKIMHETGNKRKQIIQVVQYLDERLKELDEE 182

Query: 207 XXXXXXYQQLDKQRKSLEYAIYNKEVQDAQQKLIEIEEARNKVSETSSKMYNDVLDAHEK 266
                 YQQLDKQRKSLEYAIY+KEVQDAQQKL EIE+AR KVS+TS++ YNDVLDAHEK
Sbjct: 183 KEELRKYQQLDKQRKSLEYAIYSKEVQDAQQKLTEIEDARAKVSDTSARKYNDVLDAHEK 242

Query: 267 SK 268
           SK
Sbjct: 243 SK 244


>Glyma13g27210.1 
          Length = 1171

 Score =  122 bits (307), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 68/195 (34%), Positives = 114/195 (58%), Gaps = 6/195 (3%)

Query: 1   MYIKQIVIEGFKSYREQIATETFSPKVNCVVGANGSGKTNFFHAIRFVLSDL-FQNLRSE 59
           MYIK+I +EGFKSY  +     F P  N + G NGSGK+N   +I FVL     Q +R+ 
Sbjct: 1   MYIKEICLEGFKSYATRTVVPGFDPFFNAITGLNGSGKSNILDSICFVLGITNLQQVRAS 60

Query: 60  DRHALLHEGAGHQVLSAFVEIVFDNSDN-RIPVDKE---EVRLRRTIGLK-KDEYFLDGK 114
           +   L+++     +  A V +VFDNS++ R P+  E   E+ + R I +  +++Y ++GK
Sbjct: 61  NLQELVYKQGQAGITKATVSVVFDNSNSSRSPLGYEGHSEITVTRQIVVGGRNKYLINGK 120

Query: 115 HITKTEVMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRE 174
               ++V NL  S   + +NP++++ QG+I  +  MK  E L +L+E  GTR+YE ++  
Sbjct: 121 LAQPSQVQNLFHSVQLNVNNPHFLIMQGRITKVLNMKPPEILSMLEEAAGTRMYETKKEA 180

Query: 175 SLKIMQETGNKRKQI 189
           +LK +++  +K  +I
Sbjct: 181 ALKTLEKKQSKVDEI 195


>Glyma12g36520.1 
          Length = 1171

 Score =  121 bits (304), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 68/195 (34%), Positives = 113/195 (57%), Gaps = 6/195 (3%)

Query: 1   MYIKQIVIEGFKSYREQIATETFSPKVNCVVGANGSGKTNFFHAIRFVLSDL-FQNLRSE 59
           MYIK+I +EGFKSY  +     F P  N + G NGSGK+N   +I FVL     Q +R+ 
Sbjct: 1   MYIKEICLEGFKSYATRTVVPGFDPFFNAITGLNGSGKSNILDSICFVLGITNLQQVRAS 60

Query: 60  DRHALLHEGAGHQVLSAFVEIVFDNS-DNRIPVDKE---EVRLRRTIGLK-KDEYFLDGK 114
           +   L+++     +  A V +VFDNS  +R P+  E   E+ + R I +  +++Y ++GK
Sbjct: 61  NLQELVYKQGQAGITKATVSVVFDNSHSSRSPLGYEGHSEITVTRQIVVGGRNKYLINGK 120

Query: 115 HITKTEVMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRE 174
               ++V NL  S   + +NP++++ QG+I  +  MK  E L +L+E  GTR+YE ++  
Sbjct: 121 LAQPSQVQNLFHSVQLNVNNPHFLIMQGRITKVLNMKPQEILSMLEEAAGTRMYETKKEA 180

Query: 175 SLKIMQETGNKRKQI 189
           +LK +++  +K  +I
Sbjct: 181 ALKTLEKKQSKVDEI 195


>Glyma13g05430.1 
          Length = 1248

 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 14/208 (6%)

Query: 1   MYIKQIVIEGFKSYREQIATETFSPKVNCVVGANGSGKTNFFHAIRFVLSDLFQNLRSED 60
           ++IK++V+  FKSY  +     F    + VVG NGSGK+N   A+ FV     + +R   
Sbjct: 23  LFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNK 82

Query: 61  RHALLHEGAGHQVLSA------FVEIV-FDNSDNRIPVDKEEVRLRRTIGLKKDEYFLDG 113
              L+H    HQ L +      F EIV  D+         + V  R        +Y+++ 
Sbjct: 83  VSELIHNSTNHQNLDSAGVSVHFQEIVDSDDGTYEAVAGSDFVITRVAFRDNSSKYYIND 142

Query: 114 KHITKTEVMNLLESAGFSRSNPYYVVQQGKIASLTLMK-------DSERLDLLKEIGGTR 166
           +    TEV   L+  G    N  +++ QG++  ++LMK       D   L+ L++I GT 
Sbjct: 143 RTSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLEDIIGTN 202

Query: 167 VYEERRRESLKIMQETGNKRKQIIQVVQ 194
            Y E+  ES K+++    KR  ++Q+V+
Sbjct: 203 KYVEKIDESHKLLESLNEKRSGVVQMVK 230


>Glyma19g02680.1 
          Length = 1228

 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 16/193 (8%)

Query: 1   MYIKQIVIEGFKSYREQIATETFSPKVNCVVGANGSGKTNFFHAIRFVLSDLFQNLRSED 60
           ++IK++V+  FKSY  +     F    + VVG NGSGK+N   A+ FV     + +R   
Sbjct: 23  LFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNK 82

Query: 61  RHALLHEGAGHQVL-SAFVEIVF-------DNSDNRIPVDKEEVRLRRTIGLKKDEYFLD 112
              L+H    HQ L SA V + F       D +   +P   + V  R        +Y+++
Sbjct: 83  VSELIHNSTNHQNLDSAGVSVHFQEIVDSDDGTYEAVP-GSDFVITRVAFRDNSSKYYIN 141

Query: 113 GKHITKTEVMNLLESAGFSRSNPYYVVQQGKIASLTLMK-------DSERLDLLKEIGGT 165
                 TEV   L+  G    N  +++ QG++  ++LMK       D   L+ L++I GT
Sbjct: 142 NHTSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLEDIIGT 201

Query: 166 RVYEERRRESLKI 178
             Y E+  ES K+
Sbjct: 202 NKYVEKIDESHKL 214