Miyakogusa Predicted Gene

Lj2g3v2905060.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2905060.1 tr|Q0IS21|Q0IS21_ORYSJ Os11g0573200 protein
(Fragment) OS=Oryza sativa subsp. japonica
GN=Os11g05732,43.75,0.00000000000001,zinc finger,Zinc finger,
CCHC-type; Retrovirus zinc finger-like domains,Zinc finger, CCHC-type;
zf-C,CUFF.39487.1
         (326 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g11270.3                                                       159   3e-39
Glyma20g11270.4                                                       159   3e-39
Glyma20g11270.2                                                       159   4e-39
Glyma20g11270.1                                                       159   4e-39
Glyma13g15790.3                                                       152   4e-37
Glyma13g15790.1                                                       152   5e-37
Glyma13g15790.2                                                       152   6e-37
Glyma20g11270.5                                                        54   2e-07

>Glyma20g11270.3 
          Length = 482

 Score =  159 bits (403), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 81/158 (51%), Positives = 101/158 (63%), Gaps = 7/158 (4%)

Query: 150 KGTEKMEPTEAGTVQAVLFQEEAVE-TIKGTQKMEPSEAGTVQMSDNVVLRKLLRGPRYY 208
           K T K++   AG    V+ +E+ +E T   T+  E  E   V +  N+VLRKLLRGPRY+
Sbjct: 98  KKTAKLKREAAGDQSVVIAEEQEMEETSNATENHEFVEGSPVLIGHNMVLRKLLRGPRYF 157

Query: 209 DPPADCGWETCYNCGEEGHATVKCAAAKELKKPCYLCGSLMHQAKRCKKERDCIICRKVG 268
           DPP D  W  C+NCGE+GHA V C+AAK  KKPCY+CG L H A++C K +DC IC+K G
Sbjct: 158 DPP-DSSWGACFNCGEDGHAAVNCSAAKR-KKPCYVCGGLGHNARQCTKAQDCFICKKGG 215

Query: 269 HPVKNCRRTHMGDS----ICLRCRISGHDMFSCGNFYS 302
           H  K+C   H   S    ICL+C  SGHDMFSC N YS
Sbjct: 216 HRAKDCLEKHTSRSKSVAICLKCGNSGHDMFSCRNDYS 253


>Glyma20g11270.4 
          Length = 483

 Score =  159 bits (403), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 81/158 (51%), Positives = 101/158 (63%), Gaps = 7/158 (4%)

Query: 150 KGTEKMEPTEAGTVQAVLFQEEAVE-TIKGTQKMEPSEAGTVQMSDNVVLRKLLRGPRYY 208
           K T K++   AG    V+ +E+ +E T   T+  E  E   V +  N+VLRKLLRGPRY+
Sbjct: 98  KKTAKLKREAAGDQSVVIAEEQEMEETSNATENHEFVEGSPVLIGHNMVLRKLLRGPRYF 157

Query: 209 DPPADCGWETCYNCGEEGHATVKCAAAKELKKPCYLCGSLMHQAKRCKKERDCIICRKVG 268
           DPP D  W  C+NCGE+GHA V C+AAK  KKPCY+CG L H A++C K +DC IC+K G
Sbjct: 158 DPP-DSSWGACFNCGEDGHAAVNCSAAKR-KKPCYVCGGLGHNARQCTKAQDCFICKKGG 215

Query: 269 HPVKNCRRTHMGDS----ICLRCRISGHDMFSCGNFYS 302
           H  K+C   H   S    ICL+C  SGHDMFSC N YS
Sbjct: 216 HRAKDCLEKHTSRSKSVAICLKCGNSGHDMFSCRNDYS 253


>Glyma20g11270.2 
          Length = 352

 Score =  159 bits (402), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 81/158 (51%), Positives = 101/158 (63%), Gaps = 7/158 (4%)

Query: 150 KGTEKMEPTEAGTVQAVLFQEEAVE-TIKGTQKMEPSEAGTVQMSDNVVLRKLLRGPRYY 208
           K T K++   AG    V+ +E+ +E T   T+  E  E   V +  N+VLRKLLRGPRY+
Sbjct: 98  KKTAKLKREAAGDQSVVIAEEQEMEETSNATENHEFVEGSPVLIGHNMVLRKLLRGPRYF 157

Query: 209 DPPADCGWETCYNCGEEGHATVKCAAAKELKKPCYLCGSLMHQAKRCKKERDCIICRKVG 268
           DPP D  W  C+NCGE+GHA V C+AAK  KKPCY+CG L H A++C K +DC IC+K G
Sbjct: 158 DPP-DSSWGACFNCGEDGHAAVNCSAAKR-KKPCYVCGGLGHNARQCTKAQDCFICKKGG 215

Query: 269 HPVKNCRRTHMGDS----ICLRCRISGHDMFSCGNFYS 302
           H  K+C   H   S    ICL+C  SGHDMFSC N YS
Sbjct: 216 HRAKDCLEKHTSRSKSVAICLKCGNSGHDMFSCRNDYS 253


>Glyma20g11270.1 
          Length = 552

 Score =  159 bits (402), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 81/158 (51%), Positives = 101/158 (63%), Gaps = 7/158 (4%)

Query: 150 KGTEKMEPTEAGTVQAVLFQEEAVE-TIKGTQKMEPSEAGTVQMSDNVVLRKLLRGPRYY 208
           K T K++   AG    V+ +E+ +E T   T+  E  E   V +  N+VLRKLLRGPRY+
Sbjct: 98  KKTAKLKREAAGDQSVVIAEEQEMEETSNATENHEFVEGSPVLIGHNMVLRKLLRGPRYF 157

Query: 209 DPPADCGWETCYNCGEEGHATVKCAAAKELKKPCYLCGSLMHQAKRCKKERDCIICRKVG 268
           DPP D  W  C+NCGE+GHA V C+AAK  KKPCY+CG L H A++C K +DC IC+K G
Sbjct: 158 DPP-DSSWGACFNCGEDGHAAVNCSAAKR-KKPCYVCGGLGHNARQCTKAQDCFICKKGG 215

Query: 269 HPVKNCRRTHMGDS----ICLRCRISGHDMFSCGNFYS 302
           H  K+C   H   S    ICL+C  SGHDMFSC N YS
Sbjct: 216 HRAKDCLEKHTSRSKSVAICLKCGNSGHDMFSCRNDYS 253


>Glyma13g15790.3 
          Length = 296

 Score =  152 bits (385), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 82/158 (51%), Positives = 102/158 (64%), Gaps = 11/158 (6%)

Query: 150 KGTEKMEPTEAGTVQAVLFQEEAVE-TIKGTQKMEPSEAGTVQMSDNVVLRKLLRGPRYY 208
           K T K++  EAG    V+ +E+ +E TI  T   E    G  ++ DN+VLRKLLRGPRY+
Sbjct: 98  KKTAKLK-VEAGDQSVVIAEEQEMEETINAT---ENHVEGRPEIGDNMVLRKLLRGPRYF 153

Query: 209 DPPADCGWETCYNCGEEGHATVKCAAAKELKKPCYLCGSLMHQAKRCKKERDCIICRKVG 268
           DPP D  W  C+NCGEEGHA V C+A K  KKPCY+CG L H A++C K +DC IC+K G
Sbjct: 154 DPP-DNSWGACFNCGEEGHAAVNCSAVKR-KKPCYVCGCLGHNARQCSKVQDCFICKKGG 211

Query: 269 HPVKNCRRTHMGDS----ICLRCRISGHDMFSCGNFYS 302
           H  K+C   H   S    ICL+C  SGHD+FSC N YS
Sbjct: 212 HRAKDCPEKHTSTSKSIAICLKCGNSGHDIFSCRNDYS 249


>Glyma13g15790.1 
          Length = 529

 Score =  152 bits (384), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 79/149 (53%), Positives = 97/149 (65%), Gaps = 10/149 (6%)

Query: 159 EAGTVQAVLFQEEAVE-TIKGTQKMEPSEAGTVQMSDNVVLRKLLRGPRYYDPPADCGWE 217
           EAG    V+ +E+ +E TI  T   E    G  ++ DN+VLRKLLRGPRY+DPP D  W 
Sbjct: 106 EAGDQSVVIAEEQEMEETINAT---ENHVEGRPEIGDNMVLRKLLRGPRYFDPP-DNSWG 161

Query: 218 TCYNCGEEGHATVKCAAAKELKKPCYLCGSLMHQAKRCKKERDCIICRKVGHPVKNCRRT 277
            C+NCGEEGHA V C+A K  KKPCY+CG L H A++C K +DC IC+K GH  K+C   
Sbjct: 162 ACFNCGEEGHAAVNCSAVKR-KKPCYVCGCLGHNARQCSKVQDCFICKKGGHRAKDCPEK 220

Query: 278 HMGDS----ICLRCRISGHDMFSCGNFYS 302
           H   S    ICL+C  SGHD+FSC N YS
Sbjct: 221 HTSTSKSIAICLKCGNSGHDIFSCRNDYS 249


>Glyma13g15790.2 
          Length = 307

 Score =  152 bits (383), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 82/158 (51%), Positives = 102/158 (64%), Gaps = 11/158 (6%)

Query: 150 KGTEKMEPTEAGTVQAVLFQEEAVE-TIKGTQKMEPSEAGTVQMSDNVVLRKLLRGPRYY 208
           K T K++  EAG    V+ +E+ +E TI  T   E    G  ++ DN+VLRKLLRGPRY+
Sbjct: 98  KKTAKLK-VEAGDQSVVIAEEQEMEETINAT---ENHVEGRPEIGDNMVLRKLLRGPRYF 153

Query: 209 DPPADCGWETCYNCGEEGHATVKCAAAKELKKPCYLCGSLMHQAKRCKKERDCIICRKVG 268
           DPP D  W  C+NCGEEGHA V C+A K  KKPCY+CG L H A++C K +DC IC+K G
Sbjct: 154 DPP-DNSWGACFNCGEEGHAAVNCSAVKR-KKPCYVCGCLGHNARQCSKVQDCFICKKGG 211

Query: 269 HPVKNCRRTHMGDS----ICLRCRISGHDMFSCGNFYS 302
           H  K+C   H   S    ICL+C  SGHD+FSC N YS
Sbjct: 212 HRAKDCPEKHTSTSKSIAICLKCGNSGHDIFSCRNDYS 249


>Glyma20g11270.5 
          Length = 391

 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/48 (54%), Positives = 30/48 (62%), Gaps = 4/48 (8%)

Query: 259 RDCIICRKVGHPVKNCRRTHMGDS----ICLRCRISGHDMFSCGNFYS 302
           +DC IC+K GH  K+C   H   S    ICL+C  SGHDMFSC N YS
Sbjct: 45  QDCFICKKGGHRAKDCLEKHTSRSKSVAICLKCGNSGHDMFSCRNDYS 92