Miyakogusa Predicted Gene

Lj2g3v2900210.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2900210.2 tr|A9T1C3|A9T1C3_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_190638,53.93,7e-18,Ribosomal_L30,Ribosomal protein L30,
ferredoxin-like fold domain;
Ribosomal_L30_ferredoxin-like,Ribo,CUFF.39547.2
         (107 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g05160.2                                                       205   9e-54
Glyma14g05160.1                                                       205   9e-54
Glyma02g43750.1                                                       201   1e-52

>Glyma14g05160.2 
          Length = 107

 Score =  205 bits (522), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 99/107 (92%), Positives = 102/107 (95%)

Query: 1   MNAFKAYKACVPIAWSPNLYITLVRGIPGTRRLHRRTLEALRLGKCNRTVMRWNTPTVRG 60
           MNAFKAYKACVPIAWSPN+YITLVRGIPGTRRLHRRTLEALRL KCNRTVMRWNTPTVRG
Sbjct: 1   MNAFKAYKACVPIAWSPNIYITLVRGIPGTRRLHRRTLEALRLRKCNRTVMRWNTPTVRG 60

Query: 61  MLQQVKRLVVIETEEMYKARKQKEEAHRALRPPLVINHQPSSATGTL 107
           MLQQVKRLVVIETEEMYKARKQKEEAHRALRPPLVI+H+P S T  L
Sbjct: 61  MLQQVKRLVVIETEEMYKARKQKEEAHRALRPPLVISHKPPSVTDAL 107


>Glyma14g05160.1 
          Length = 107

 Score =  205 bits (522), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 99/107 (92%), Positives = 102/107 (95%)

Query: 1   MNAFKAYKACVPIAWSPNLYITLVRGIPGTRRLHRRTLEALRLGKCNRTVMRWNTPTVRG 60
           MNAFKAYKACVPIAWSPN+YITLVRGIPGTRRLHRRTLEALRL KCNRTVMRWNTPTVRG
Sbjct: 1   MNAFKAYKACVPIAWSPNIYITLVRGIPGTRRLHRRTLEALRLRKCNRTVMRWNTPTVRG 60

Query: 61  MLQQVKRLVVIETEEMYKARKQKEEAHRALRPPLVINHQPSSATGTL 107
           MLQQVKRLVVIETEEMYKARKQKEEAHRALRPPLVI+H+P S T  L
Sbjct: 61  MLQQVKRLVVIETEEMYKARKQKEEAHRALRPPLVISHKPPSVTDAL 107


>Glyma02g43750.1 
          Length = 107

 Score =  201 bits (512), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 97/107 (90%), Positives = 100/107 (93%)

Query: 1   MNAFKAYKACVPIAWSPNLYITLVRGIPGTRRLHRRTLEALRLGKCNRTVMRWNTPTVRG 60
           MNAFKAYKACVPIAWSPN+YITLVRGIPGTRRLHRRTLEALRL KCNRTVMRWNTPTVRG
Sbjct: 1   MNAFKAYKACVPIAWSPNIYITLVRGIPGTRRLHRRTLEALRLRKCNRTVMRWNTPTVRG 60

Query: 61  MLQQVKRLVVIETEEMYKARKQKEEAHRALRPPLVINHQPSSATGTL 107
           MLQQVKRLVVIETEEMYKARKQKEEAHRALR P VI+H+P S T  L
Sbjct: 61  MLQQVKRLVVIETEEMYKARKQKEEAHRALRSPFVISHKPPSVTDAL 107