Miyakogusa Predicted Gene
- Lj2g3v2843420.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2843420.1 tr|C7JA22|C7JA22_ORYSJ Os12g0109700 protein
(Fragment) OS=Oryza sativa subsp. japonica
GN=Os12g01097,60.56,1e-17,PLAC8,Uncharacterised protein family
Cys-rich; DUF2985,Protein of unknown function DUF2985;
A_thal_C,NODE_42470_length_2077_cov_176.458832.path2.1
(556 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma02g42830.1 829 0.0
Glyma11g35810.1 757 0.0
Glyma18g02600.1 717 0.0
Glyma03g05040.1 540 e-153
Glyma01g32020.1 346 4e-95
Glyma07g30800.1 70 8e-12
Glyma13g32140.1 57 4e-08
Glyma08g06480.1 53 8e-07
>Glyma02g42830.1
Length = 541
Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/560 (74%), Positives = 462/560 (82%), Gaps = 23/560 (4%)
Query: 1 MVSVDNGKDEIEECSNGSKVKEL-SLDVSMSRRTMLDSENSQRKYQGTASSIPDRLXXXX 59
MVSVDNGKDEIEE SNGSKV E S+D+S SRRTM+ +EN QRK+QGT SSIP+R+
Sbjct: 1 MVSVDNGKDEIEE-SNGSKVNEFASIDISTSRRTMVGNENPQRKFQGTLSSIPNRINFFK 59
Query: 60 XXXXXXXXXRIASDRDQISQLVPSPSSRSIRERFSGMFSKKLDWGSIKKMCREWIRDPMN 119
R+A+++DQISQ VPSP S +RERFSGMF+KKLDW S+KKMC EW RDPMN
Sbjct: 60 FGSASAKFRRLATEKDQISQGVPSPGSIGLRERFSGMFAKKLDWVSLKKMCLEWFRDPMN 119
Query: 120 MALFAWILCVAVSGAILFLVMTGMLNAVLTKKSQRNAWFEVNNQILNALFTLMCLYQHPK 179
+ALF WILCVA+SGAILFLVMTGMLNAVL +KSQRNAWFEVNNQILNALFTLMCLYQHPK
Sbjct: 120 IALFVWILCVAISGAILFLVMTGMLNAVLPRKSQRNAWFEVNNQILNALFTLMCLYQHPK 179
Query: 180 RIYHFVLLCRWGPKDIPRLRKVYCKNGTYKPHEWAHMMAVIILLNVNCFAQYALCGLNLG 239
RIYH VLLCRW P+DI RLRKVYCKNGTYKPHEWAHMM ++ILLNVNCFAQYALCGLNLG
Sbjct: 180 RIYHLVLLCRWSPQDISRLRKVYCKNGTYKPHEWAHMMVMVILLNVNCFAQYALCGLNLG 239
Query: 240 YKRSQRPAIGVGICVSFSIGAPAIAGLYSILSPLGKDYDSEMDEEAQVHIPDAQK---LR 296
YKRS RPAIGVGIC+SF+IGAPA+AGLYSILSPLGKDY SEMDEEAQ+ AQK LR
Sbjct: 240 YKRSDRPAIGVGICISFAIGAPAVAGLYSILSPLGKDYHSEMDEEAQIQESVAQKQEPLR 299
Query: 297 VTPFEKKYSFSSRDQRRIIENRPKWSGGILDLWNDISEAYLSLFCTFCVFGWNMERLGFG 356
V F+KKYSF+S+ QRR+IE RP+WSGGILD+WNDIS+AYLSLFCTFCVFGWNMERLGFG
Sbjct: 300 VKSFQKKYSFASKQQRRVIETRPQWSGGILDIWNDISQAYLSLFCTFCVFGWNMERLGFG 359
Query: 357 NMFVHIATFMLFCMAPFWIFILAAVNIEDDTVRQALVGVGIILCFFGMLYGGFWRIRMRN 416
NM+VHIATFMLFCMAPFWIFILAAVNIED+TVRQALV GIILC FG+LYGGFWRI+MR
Sbjct: 360 NMYVHIATFMLFCMAPFWIFILAAVNIEDETVRQALVATGIILCLFGLLYGGFWRIQMRK 419
Query: 417 RFNLPSYDFCCGKPSASDCTLWLFCCWCALAQEVRTANSYDIVEDKFYKKGIYADDQPQI 476
RFNLP+Y+FC GKPSASDCTLWL CCWC+LAQEVRT NSYDI+EDK +K +Y+ DQ +
Sbjct: 420 RFNLPTYNFCFGKPSASDCTLWLCCCWCSLAQEVRTGNSYDIIEDKLCRKEVYSSDQQLM 479
Query: 477 SPLPREDVAXXXXXXXXXXXPLGFNXXXXXXXXXXXXXXXFKGRYNPDRPLSSVTEEVPE 536
SPLPREDVA PLG N P PL+S +EEVPE
Sbjct: 480 SPLPREDVA---SSKSGTSSPLGNNSS--------------PSMIKPSSPLNS-SEEVPE 521
Query: 537 KAKDGVMNPPTPPSIHRESP 556
++KDG MNPPTPPSI RESP
Sbjct: 522 RSKDGTMNPPTPPSIQRESP 541
>Glyma11g35810.1
Length = 565
Score = 757 bits (1955), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/569 (67%), Positives = 437/569 (76%), Gaps = 19/569 (3%)
Query: 1 MVSVDNG----KDEIEECSNGSKVKEL-SLDVSMSRRTMLDSENSQRKYQGT-ASSIPDR 54
MVSVDNG KDEIEE SNG+KV E S+D+S + +T ++SE+ QR+ QGT SS+P+R
Sbjct: 1 MVSVDNGIGNSKDEIEE-SNGNKVNEFTSIDISTTHKTFVNSEDPQRRLQGTLGSSVPNR 59
Query: 55 LXXXXXXXXXXXXXRIASDRDQISQLVPSPSSRSIRERFSGMFSKKLDWGSIKKMCREWI 114
+ R+A++RDQ+S VPSP +S+R RFSGMF++KLDWGS+KKM EWI
Sbjct: 60 INFLKFDSASAKFRRLATERDQVSLSVPSPRPKSLRSRFSGMFAQKLDWGSVKKMFIEWI 119
Query: 115 RDPMNMALFAWILCVAVSGAILFLVMTGMLNAVLTKKSQRNAWFEVNNQILNALFTLMCL 174
R PMNMALF WI+CVAVSGAILFLVMTGMLN +L +KSQRN WFE+NNQILNALFTLMCL
Sbjct: 120 RSPMNMALFVWIVCVAVSGAILFLVMTGMLNGLLPRKSQRNTWFEINNQILNALFTLMCL 179
Query: 175 YQHPKRIYHFVLLCRWGPKDIPRLRKVYCKNGTYKPHEWAHMMAVIILLNVNCFAQYALC 234
YQHPKR YH VLL RW P DI RLRKVYCKNGTYKPHEW HMM V+ILL+VNCFAQYALC
Sbjct: 180 YQHPKRFYHLVLLIRWRPTDISRLRKVYCKNGTYKPHEWTHMMVVVILLHVNCFAQYALC 239
Query: 235 GLNLGYKRSQRPAIGVGICVSFSIGAPAIAGLYSILSPLGKDYDSEMDEEAQVHIPDAQ- 293
GLNLGYKRS+RPAIGVGIC+SF+I APAIAGLY+ILSPLGKDYD EMDEEAQV + +Q
Sbjct: 240 GLNLGYKRSERPAIGVGICISFAIAAPAIAGLYTILSPLGKDYDCEMDEEAQVQVTASQG 299
Query: 294 --KLRVTPFEKKYSFSSRDQR-RIIENRPKWSGGILDLWNDISEAYLSLFCTFCVFGWNM 350
+LR PFEK YSF+S+D R R +ENRPKWSGGILD+WNDIS AYLSLFCTFCVFGWNM
Sbjct: 300 QEQLREKPFEKNYSFASKDDRQRFVENRPKWSGGILDIWNDISLAYLSLFCTFCVFGWNM 359
Query: 351 ERLGFGNMFVHIATFMLFCMAPFWIFILAAVNIEDDTVRQALVGVGIILCFFGMLYGGFW 410
ERLGFGNM+VHIATFMLFCMAPFWIF LA+VNI+DD VRQAL VGIILCF G+LYGGFW
Sbjct: 360 ERLGFGNMYVHIATFMLFCMAPFWIFFLASVNIDDDNVRQALAAVGIILCFLGLLYGGFW 419
Query: 411 RIRMRNRFNLPSYDFCCGKPSASDCTLWLFCCWCALAQEVRTANSYDIVEDKFYKKGIYA 470
RI+MR RFNLP+YDFC GK S SDC LWL CCWC LAQE RT N+YD+VEDKF +K
Sbjct: 420 RIQMRKRFNLPAYDFCFGKHSVSDCILWLCCCWCTLAQEARTGNNYDLVEDKFSRKETDT 479
Query: 471 -DDQPQISPLPREDVAXXXXXXXXXXXPLGFNXXXXXXXXXXX----XXXXFKGRYNPDR 525
D++P ISPL REDV PLG KG Y DR
Sbjct: 480 RDEKPSISPLAREDVV---STKSGTSSPLGSTSNSSPYVMKTSSPPNSSNVLKGYYTSDR 536
Query: 526 PLSSVTEEVPEKAKDGVMNPPTPPSIHRE 554
LS++ +E E+ KDG MNPP P I RE
Sbjct: 537 MLSNLNQENCERGKDGTMNPPAPSLIQRE 565
>Glyma18g02600.1
Length = 536
Score = 717 bits (1851), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/559 (63%), Positives = 420/559 (75%), Gaps = 42/559 (7%)
Query: 1 MVSVDNG----KDEIEECSNGSKVKEL-SLDVSMSRRTMLDSENSQRKYQGT--ASSIPD 53
MVSVD+G DEIE+ SNGSKV E S+D+S ++++ L+SE+ QR+ QGT +SS+ +
Sbjct: 1 MVSVDDGIVNPNDEIEK-SNGSKVNEFASMDISATQKSYLNSEDPQRRLQGTLISSSVTN 59
Query: 54 RLXXXXXXXXXXXXXRIASDRDQISQLVPSPSSRSIRERFSGMFSKKLDWGSIKKMCREW 113
R+ R+A++RDQ+S VPSP S+S+R RFSGMF++KLDW S+KKMC EW
Sbjct: 60 RINFLKFGSASAKFKRLATERDQVSISVPSPRSKSLRSRFSGMFAQKLDWASVKKMCMEW 119
Query: 114 IRDPMNMALFAWILCVAVSGAILFLVMTGMLNAVLTKKSQRNAWFEVNNQILNALFTLMC 173
IR+P+NMALF WI+CVAVSGAILFLVMTGMLN VL +KS+RNAWFEVNNQILNA+FTL+
Sbjct: 120 IRNPVNMALFVWIICVAVSGAILFLVMTGMLNGVLPRKSKRNAWFEVNNQILNAVFTLI- 178
Query: 174 LYQHPKRIYHFVLLCRWGPKDIPRLRKVYCKNGTYKPHEWAHMMAVIILLNVNCFAQYAL 233
P DI LRKVYCKN TYKPHEW HMM V+ILL+VNCFAQYAL
Sbjct: 179 ------------------PNDISSLRKVYCKNVTYKPHEWTHMMVVVILLHVNCFAQYAL 220
Query: 234 CGLNLGYKRSQRPAIGVGICVSFSIGAPAIAGLYSILSPLGKDYDSEMDEEAQVHIPDAQ 293
CGLNLGYKRS+RPAIGVGIC+SF AIAGLY+ILSPLGKDYD EMDEEAQV I +Q
Sbjct: 221 CGLNLGYKRSERPAIGVGICISF-----AIAGLYTILSPLGKDYDCEMDEEAQVQITASQ 275
Query: 294 ---KLRVTPFEKKYSFSSRDQRRIIENRPKWSGGILDLWNDISEAYLSLFCTFCVFGWNM 350
+LR P EKKYSF+S+DQ+R++ENRPKWSGGILD+WNDIS AYLSLFCTFCV GWNM
Sbjct: 276 GKEQLREKPTEKKYSFASKDQQRVVENRPKWSGGILDIWNDISLAYLSLFCTFCVLGWNM 335
Query: 351 ERLGFGNMFVHIATFMLFCMAPFWIFILAAVNIEDDTVRQALVGVGIILCFFGMLYGGFW 410
+RLGFGNM+VHIA FMLFCMAPFWIF+LA+VNI+DD VRQAL VGIILCF G+LYGGFW
Sbjct: 336 KRLGFGNMYVHIAIFMLFCMAPFWIFLLASVNIDDDNVRQALAAVGIILCFLGLLYGGFW 395
Query: 411 RIRMRNRFNLPSYDFCCGKPSASDCTLWLFCCWCALAQEVRTANSYDIVEDKFYKKGIYA 470
RI+MR RFNLP+YDFC GKPSASDCTLWL CCWC+LAQE RT N+YD+VEDKF +K
Sbjct: 396 RIQMRKRFNLPAYDFCFGKPSASDCTLWLPCCWCSLAQEARTRNNYDLVEDKFSRKETDT 455
Query: 471 DDQPQISPLPREDVAXXXXXXXXXXXPLGFNXXXX----XXXXXXXXXXXFKGRYNPDRP 526
DQP ISPL REDV P+G KG Y+PD+
Sbjct: 456 SDQPSISPLAREDVV---STRSGTSSPMGSTSNSSPYMMKTSSSPNSSNVLKGYYSPDKM 512
Query: 527 LSSVTEEVPEKAKDGVMNP 545
LS++ E+ E+ +DG MNP
Sbjct: 513 LSTLNEDNCERGQDGTMNP 531
>Glyma03g05040.1
Length = 488
Score = 540 bits (1392), Expect = e-153, Method: Compositional matrix adjust.
Identities = 266/470 (56%), Positives = 341/470 (72%), Gaps = 22/470 (4%)
Query: 25 LDVSMSRRTMLDSENSQRKYQGTASSIPD-----RLXXXXXXXXXXXXXRI---ASDRDQ 76
L +S S+R +L E+ + Q +SI + RL ++ +R +
Sbjct: 2 LQISSSQRGLLSDESHHIRKQKMLTSIANIFKLQRLTLTPHANSASPSAKLRKKTEERYE 61
Query: 77 ISQLVPSPSSRSIRERFSGMFSKKLDWGSIKKMCREWIRDPMNMALFAWILCVAVSGAIL 136
S VPS ++R+ F+ F+KK+DW S+++ C++WI++P+NMA+ WI CVAVSGAIL
Sbjct: 62 FSHFVPSSIRENLRKPFNCFFAKKIDWPSLRRSCKQWIKNPLNMAILLWITCVAVSGAIL 121
Query: 137 FLVMTGMLNAVLTKKSQRNAWFEVNNQILNALFTLMCLYQHPKRIYHFVLLCRWGPKDIP 196
FLVMTGMLN +L K+SQRN+WFEVNNQ LNALFTLMCLYQHPKR +H VLLCRW PKDI
Sbjct: 122 FLVMTGMLNKILNKQSQRNSWFEVNNQFLNALFTLMCLYQHPKRFHHLVLLCRWKPKDII 181
Query: 197 RLRKVYCKNGTYKPHEWAHMMAVIILLNVNCFAQYALCGLNLGYKRSQRPAIGVGICVSF 256
LRK+YCKNGT KPHEW HMM V++LL+VNCFAQYALCGLN G+ RS+RP +GVGIC+S
Sbjct: 182 ILRKLYCKNGTCKPHEWFHMMVVVVLLHVNCFAQYALCGLNWGFNRSERPVVGVGICISI 241
Query: 257 SIGAPAIAGLYSILSPLGKDYDSEMDEEAQVHIPDAQKLRVTPFEKKYSFSSRDQRRIIE 316
+I APA+AG+Y I SPLGK+Y++E E AQ HIP + +F+SR+ ++E
Sbjct: 242 AIAAPALAGVYCIASPLGKEYETE--EAAQNHIPTSN-----------TFASRNDHSLVE 288
Query: 317 NRPKWSGGILDLWNDISEAYLSLFCTFCVFGWNMERLGFGNMFVHIATFMLFCMAPFWIF 376
P+W GG+ DLW+++S A L+LFC+FCVFG NMER FGN +VHIATF+LFC+APFWIF
Sbjct: 289 YTPQWRGGLFDLWDNLSVACLTLFCSFCVFGRNMERQNFGNKYVHIATFLLFCVAPFWIF 348
Query: 377 ILAAVNIEDDTVRQALVGVGIILCFFGMLYGGFWRIRMRNRFNLPSYDFCCGKPSASDCT 436
+A +NI+D+ VR L +GI LC FG+LYGG+WRI+MR RFNLP CCGKP+ +DC
Sbjct: 349 NMATINIDDEPVRLVLGLLGIFLCVFGLLYGGYWRIQMRERFNLPPNKLCCGKPAVTDCI 408
Query: 437 LWLFCCWCALAQEVRTANSYDIVEDKFY-KKGIYADDQPQISPLPREDVA 485
WLFCCWC+LAQEVRTA SYDIVEDKF+ KK + Q ++ LP ED A
Sbjct: 409 QWLFCCWCSLAQEVRTAESYDIVEDKFFCKKQTQSCVQLALNSLPPEDKA 458
>Glyma01g32020.1
Length = 305
Score = 346 bits (888), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 178/327 (54%), Positives = 227/327 (69%), Gaps = 38/327 (11%)
Query: 160 VNNQILNALFTLMCLYQHPKRIYHFVLLCRWGPKDIPRLRKVYCKNGTYKPHEWAHMMAV 219
VNNQ LNALFTLMCLYQHPKR +H VLLCRW PK I LRK+YCKNGT KPHE HMM V
Sbjct: 1 VNNQFLNALFTLMCLYQHPKRFHHLVLLCRWKPKGIIFLRKIYCKNGTCKPHERVHMMVV 60
Query: 220 IILLNVNCFAQYALCGLNLGYKRSQRPAIGVGICVSFSIGAPAIAGLYSILSPLGKDYDS 279
++LL+VNCF+QYALCGL G+ RS+RP +GVGIC+S +I APA+AG+ I SP+GKD
Sbjct: 61 VVLLHVNCFSQYALCGLKWGFNRSERPVVGVGICISIAIAAPALAGVNCIASPIGKD--- 117
Query: 280 EMDEEAQVHIPDAQKLRVTPFEKKYSFSSRDQRRIIENRPKWSGGILDLWNDISEAYLSL 339
++E P+W GG+ DL +++S A L+L
Sbjct: 118 ----------------------------------LVEYTPQWRGGLFDLRDNLSVACLTL 143
Query: 340 FCTFCVFGWNMERLGFGNMFVHIATFMLFCMAPFWIFILAAVNIEDDTVRQALVGVGIIL 399
FC+FCV G N+E+L FGN +VHIATF+LFC+APFWI +NI+++ VR L +G++L
Sbjct: 144 FCSFCVVGRNLEKLHFGNKYVHIATFLLFCVAPFWILNTVTINIDNEPVRVVLGLLGMLL 203
Query: 400 CFFGMLYGGFWRIRMRNRFNLPSYDFCCGKPSASDCTLWLFCCWCALAQEVRTANSYDIV 459
C FG+LYGG+WRI+MR +FNLP CCGKP+ +DC WL CCWC+LAQEVRTA YDIV
Sbjct: 204 CVFGLLYGGYWRIQMRGKFNLPPNKLCCGKPAVTDCIQWLLCCWCSLAQEVRTAEYYDIV 263
Query: 460 EDKFY-KKGIYADDQPQISPLPREDVA 485
+DKF+ +K + +P ++ LP ED A
Sbjct: 264 DDKFFCQKLTQSCVKPALNSLPPEDKA 290
>Glyma07g30800.1
Length = 255
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 67/147 (45%), Gaps = 10/147 (6%)
Query: 321 WSGGILDLWNDISEAYLSLFCTFCVFGWNMERLGFGNMFVHIATFMLFCMAPFWIFILAA 380
W G +LD ++D A S C FG NM+R GFG+ ++ A + L + F FI A
Sbjct: 75 WEGEVLDCFDDHRIAIESTCCPCYRFGKNMKRAGFGSCYIQAAIYFLLAVGAFLNFIAFA 134
Query: 381 VNIEDDTVRQALVGVGIILCFFGMLYGGFWRIRMRNRFNLPSYDFCCGKPSASDCTLWLF 440
V T R + + + Y GF+R R+R +FN+ D S DC
Sbjct: 135 V-----TRRHCYLYLTVAFVVSVGAYLGFFRTRLRKKFNIMGSD-----SSMDDCVYHFA 184
Query: 441 CCWCALAQEVRTANSYDIVEDKFYKKG 467
C C L QE RT ++ + ++ +G
Sbjct: 185 CPCCTLCQESRTLEMNNVRDGTWHGRG 211
>Glyma13g32140.1
Length = 246
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 61/147 (41%), Gaps = 10/147 (6%)
Query: 321 WSGGILDLWNDISEAYLSLFCTFCVFGWNMERLGFGNMFVHIATFMLFCMAPFWIFILAA 380
W G +LD ++D A+ S C FG NM+ GFG+ ++ + L + F I
Sbjct: 66 WEGELLDCFDDRRIAFESACCPCYRFGKNMKLAGFGSCYIQAIVYFLLAIGAFVTSIAYT 125
Query: 381 VNIEDDTVRQALVGVGIILCFFGMLYGGFWRIRMRNRFNLPSYDFCCGKPSASDCTLWLF 440
+ T + + + Y GF+R RMR +FN+ D S D
Sbjct: 126 I-----TRTHYFLYLAVAFIIAVGAYLGFYRTRMRKKFNIKGSD-----SSLDDFVYHFV 175
Query: 441 CCWCALAQEVRTANSYDIVEDKFYKKG 467
C C L QE RT ++ ++ +G
Sbjct: 176 CPCCTLCQESRTLEMNNVQNGTWHGRG 202
>Glyma08g06480.1
Length = 159
Score = 53.1 bits (126), Expect = 8e-07, Method: Composition-based stats.
Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Query: 321 WSGGILDLWNDISEAYLSLFCTFCVFGWNMERLGFGNMFVHIATFMLFCMAPFWIFILAA 380
W G +LD ++D A S C FG NM+R FG+ ++ A + L + F FI A
Sbjct: 60 WEGEVLDCFDDHRIALESTCCPCYRFGKNMKRADFGSCYIQGAIYFLLAIGAFLNFIAFA 119
Query: 381 VNIEDDTVRQALVGVGIILCFFGMLYGGFWRIRMRNRFNLPSYDFC 426
V T R + ++ FG Y GF+R R+R +FN+ FC
Sbjct: 120 V-----TRRHCYL---YLIVAFGA-YLGFFRTRIRKKFNIIVGVFC 156