Miyakogusa Predicted Gene

Lj2g3v2794500.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2794500.1 Non Chatacterized Hit- tr|Q8LJN2|Q8LJN2_ORYSJ
Putative uncharacterized protein B1189A09.37 OS=Oryza
,41.43,2e-19,seg,NULL; Pollen_Ole_e_I,Pollen Ole e 1
allergen/extensin,CUFF.39285.1
         (178 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g35560.1                                                       227   4e-60
Glyma18g02870.1                                                       226   1e-59
Glyma13g24720.1                                                        57   1e-08

>Glyma11g35560.1 
          Length = 174

 Score =  227 bits (579), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 105/157 (66%), Positives = 122/157 (77%)

Query: 18  IFFPCIAATENAPKAIXXXXXXXXXXXXYCQSCEHYGTWSLTGAKPIPSAKVSVTCKNHK 77
           + F C  A  + PK              YCQSC+H+GTWSL GAKPIPSAKVSVTCK+H 
Sbjct: 16  VAFSCTEANADVPKTTEKKIEVVVEATVYCQSCDHFGTWSLIGAKPIPSAKVSVTCKSHN 75

Query: 78  GKLVYYKVFESDKNGYLYAQLEEFKMQHSLLDHPLHSCYVKPVWSPLESCNLLSNVNHSL 137
           G + YYKVFE+DK+GYLYA LE FKMQH +LDHPLHSCYVKPVWSPLESC+LLSNVN+ L
Sbjct: 76  GHVSYYKVFETDKDGYLYAPLEGFKMQHYILDHPLHSCYVKPVWSPLESCSLLSNVNYGL 135

Query: 138 DGARLRYQNKRLRGSNYEAVVYSASPLAFRRSDCSHT 174
           +GA LRY+NK+L GS YEAV+Y+A PLAFR S+CS T
Sbjct: 136 NGAPLRYENKKLHGSKYEAVIYAAGPLAFRPSECSQT 172


>Glyma18g02870.1 
          Length = 174

 Score =  226 bits (575), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 105/157 (66%), Positives = 122/157 (77%)

Query: 18  IFFPCIAATENAPKAIXXXXXXXXXXXXYCQSCEHYGTWSLTGAKPIPSAKVSVTCKNHK 77
           + F    A+ + PK              YCQSC+H+GTWSL GAKPIPSAKVSVTCK+H 
Sbjct: 16  VAFSYTEASADVPKTTDKKIEVVVEATVYCQSCDHFGTWSLIGAKPIPSAKVSVTCKSHN 75

Query: 78  GKLVYYKVFESDKNGYLYAQLEEFKMQHSLLDHPLHSCYVKPVWSPLESCNLLSNVNHSL 137
           G + YYKVFE+DKNGYLYA LE FKMQH +LDHPLHSCYVKPVWSPLESC+LLSNVN+ L
Sbjct: 76  GHVSYYKVFETDKNGYLYAPLEGFKMQHYILDHPLHSCYVKPVWSPLESCSLLSNVNYGL 135

Query: 138 DGARLRYQNKRLRGSNYEAVVYSASPLAFRRSDCSHT 174
           +GA LRY+NK+L GS YEAV+Y+A PLAFR S+CS T
Sbjct: 136 NGAPLRYENKKLHGSKYEAVIYAAGPLAFRPSECSQT 172


>Glyma13g24720.1 
          Length = 294

 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 63/124 (50%), Gaps = 14/124 (11%)

Query: 46  YCQSCEHYGTWSLTGAKPIPSAKVSVTCKNHKGKLVYYKVFESDKNGYLYAQLEEFKMQH 105
           Y +SC++ G  +L GA P+  A V + C N K KLV  +  +SDKNGY Y +  +     
Sbjct: 179 YVKSCKYAGVDTLLGATPLLGAVVKLQCNNTKYKLV--QTSKSDKNGYFYIEAPK----- 231

Query: 106 SLLDHPLHSCYVKPVWSP--LESCNLLSNVNHSLDGARLRYQNKRLRGSNYEAVVYSASP 163
           S+  +  H C V  V +P  L++ NL   V  +L      + +KRL       V+Y+  P
Sbjct: 232 SITTYGAHKCNVVLVSAPYGLKASNLHGGVTGALLRPEKPFLSKRL-----PFVLYTVGP 286

Query: 164 LAFR 167
           LAF 
Sbjct: 287 LAFE 290