Miyakogusa Predicted Gene

Lj2g3v2770090.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2770090.1 Non Chatacterized Hit- tr|I1M7S5|I1M7S5_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,82.81,0,PREDICTED:
SIMILAR TO TSG24,NULL; MEIOTIC CHECKPOINT REGULATOR TSG24 FAMILY
MEMBER,Anaphase-promotin,CUFF.39389.1
         (320 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g06350.1                                                       472   e-133
Glyma02g42540.1                                                       338   3e-93

>Glyma14g06350.1 
          Length = 1630

 Score =  472 bits (1214), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 242/320 (75%), Positives = 249/320 (77%), Gaps = 33/320 (10%)

Query: 1    MSTLARECNYKDIETPTNVNVISMSTPYMLNLHPV--SSTISDAIGFEGTKFEXXXXXXX 58
            MSTLAREC Y+ +ETPTNVNVISMSTPYMLNLHPV  SSTISDAIG EGTKFE       
Sbjct: 730  MSTLARECKYRGMETPTNVNVISMSTPYMLNLHPVTISSTISDAIGLEGTKFEDTDSVDG 789

Query: 59   XXXXXMEHIFNSSTQLRYGRDLRLNEVRRLLCSSRPVAIQTSVNHSASDQDLQQAQLWHL 118
                 MEHIFNSSTQLRYGRDLRLNEVRRLLCSSRPVAIQTSVNHSASDQDLQQA     
Sbjct: 790  SMTDGMEHIFNSSTQLRYGRDLRLNEVRRLLCSSRPVAIQTSVNHSASDQDLQQA----- 844

Query: 119  AQRTTSLPLGRGAFTLATIHTLLTEAFIVPKLVLAGRLPAQQNATVNLDPNIRNIQELRS 178
                                      F VPKLVLAGRLPAQQNATVNLDPNIRNIQELRS
Sbjct: 845  --------------------------FSVPKLVLAGRLPAQQNATVNLDPNIRNIQELRS 878

Query: 179  WPEFHNAVAAGLRLAPFQGRMSRTWIIYNKPEEPNSXXXXXXXXXXXXXYLRVLTITDIY 238
            WPEFHNAVAAGLRLAP QGRMSRTW++YNKPEEPNS             YLRVL +TDIY
Sbjct: 879  WPEFHNAVAAGLRLAPLQGRMSRTWVLYNKPEEPNSVHAGLLLALGLHGYLRVLAVTDIY 938

Query: 239  QYLYQEHESTTVGLMLGLAASYRGTMQPTISKSLCVHIPVRHPSSYPELEVPTLLQSAAL 298
            QY  QEHESTTVGLMLGLAASY GTM P ISK+L  HIPVRHPSSYPELEVPTLLQSAAL
Sbjct: 939  QYFSQEHESTTVGLMLGLAASYGGTMHPAISKTLYFHIPVRHPSSYPELEVPTLLQSAAL 998

Query: 299  MSLGILYEGSANPQTMQVLL 318
            MSLGILYEGSA+PQTMQVLL
Sbjct: 999  MSLGILYEGSAHPQTMQVLL 1018


>Glyma02g42540.1 
          Length = 988

 Score =  338 bits (868), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 175/245 (71%), Positives = 178/245 (72%), Gaps = 33/245 (13%)

Query: 1   MSTLARECNYKDIETPTNVNVISMSTPYMLNLHPV--SSTISDAIGFEGTKFEXXXXXXX 58
           MSTLAREC Y+ IETPTNVNVISMSTPYMLNLHPV  SSTISDAIG EGTKFE       
Sbjct: 775 MSTLARECKYRGIETPTNVNVISMSTPYMLNLHPVTISSTISDAIGLEGTKFEDTDSVDG 834

Query: 59  XXXXXMEHIFNSSTQLRYGRDLRLNEVRRLLCSSRPVAIQTSVNHSASDQDLQQAQLWHL 118
                MEHIFNSSTQLRYGRDLRLNEVRRLLCSSRPVAIQTS NHSASDQDLQQ      
Sbjct: 835 SMTDGMEHIFNSSTQLRYGRDLRLNEVRRLLCSSRPVAIQTSANHSASDQDLQQ------ 888

Query: 119 AQRTTSLPLGRGAFTLATIHTLLTEAFIVPKLVLAGRLPAQQNATVNLDPNIRNIQELRS 178
                                    AF VPKLVLAGRLPAQQNATVNLDPNIRNIQELRS
Sbjct: 889 -------------------------AFTVPKLVLAGRLPAQQNATVNLDPNIRNIQELRS 923

Query: 179 WPEFHNAVAAGLRLAPFQGRMSRTWIIYNKPEEPNSXXXXXXXXXXXXXYLRVLTITDIY 238
           WPEFHNAVAAGLRLAP QGRMSRTWI+YNKPEEPNS             YLRVL +TDIY
Sbjct: 924 WPEFHNAVAAGLRLAPLQGRMSRTWILYNKPEEPNSVHAGLLLALGLHGYLRVLAVTDIY 983

Query: 239 QYLYQ 243
           QY  Q
Sbjct: 984 QYFSQ 988