Miyakogusa Predicted Gene

Lj2g3v2748740.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2748740.1 Non Chatacterized Hit- tr|C5YZD3|C5YZD3_SORBI
Putative uncharacterized protein Sb09g022940 OS=Sorghu,48.84,1e-18,GB
DEF: HYPOTHETICAL PROTEIN F27K19_140 (HYPOTHETICAL PROTEIN
AT3G55960),NULL; NUCLEAR LIM INTERACTO,CUFF.39238.1
         (151 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g42450.1                                                       150   7e-37
Glyma14g06430.1                                                       141   2e-34

>Glyma02g42450.1 
          Length = 304

 Score =  150 bits (378), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 86/147 (58%), Positives = 92/147 (62%), Gaps = 10/147 (6%)

Query: 1   MGELTQAEVYSPRTQQVWRALLSWLAXXXXXXXXXXRALGHYPLLXXXXXXXXXXXXXXX 60
           MGELTQAEVYSPRTQQVWRALLSWLA          RALGHYPLL               
Sbjct: 1   MGELTQAEVYSPRTQQVWRALLSWLAFFFQIFFQIIRALGHYPLLSFSSSSNAASSSN-- 58

Query: 61  XXXPHAFKPLPSVELQEHDSPPPSALEITAV----DHHPTQKXXXXXXXXXXXXCAYETS 116
                +FKPLPSVEL EHDSPP SAL+I+ +      HP  K            CAYETS
Sbjct: 59  ----ASFKPLPSVELSEHDSPPSSALQISPLHCSPKDHPIPKLTVVLDLDETLVCAYETS 114

Query: 117 SLPASLRAQAIEGGLNWFDLECVSSDK 143
           SLPA+LR QAIEGGLNWF+LECVS DK
Sbjct: 115 SLPAALRTQAIEGGLNWFELECVSIDK 141


>Glyma14g06430.1 
          Length = 299

 Score =  141 bits (356), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 80/139 (57%), Positives = 87/139 (62%), Gaps = 7/139 (5%)

Query: 9   VYSPRTQQVWRALLSWLAXXXXXXXXXXRALGHYPLLXXXXXXXXXXXXXXXXXXPHAFK 68
           VYSPRTQQVWRALLSWLA          RALGHYPLL                    +FK
Sbjct: 2   VYSPRTQQVWRALLSWLAFFFQIFFQIIRALGHYPLLSFSSNSSSSSNASSSS---SSFK 58

Query: 69  PLPSVELQEHDSPPPSALEITAVDH----HPTQKXXXXXXXXXXXXCAYETSSLPASLRA 124
           PLPSVE+ EHDSPPPSALEI+ +D+    HP  K            CAYETSSLPA+LR 
Sbjct: 59  PLPSVEIAEHDSPPPSALEISPLDYSPADHPVPKLTVVLDLDETLVCAYETSSLPAALRT 118

Query: 125 QAIEGGLNWFDLECVSSDK 143
           QAIEGGLNWF+LECVS DK
Sbjct: 119 QAIEGGLNWFELECVSIDK 137