Miyakogusa Predicted Gene

Lj2g3v2688020.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2688020.1 Non Chatacterized Hit- tr|F6HK57|F6HK57_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,80,2e-18,ubiquitin,Ubiquitin; Ubiquitin-like,NULL; no
description,NULL,CUFF.39203.1
         (103 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g13320.1                                                        97   3e-21
Glyma05g30160.1                                                        94   3e-20

>Glyma08g13320.1 
          Length = 329

 Score = 97.4 bits (241), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 44/54 (81%), Positives = 48/54 (88%)

Query: 50  EEMPLKVKWSGKDYTVRVCGDDTIVELKRRICELTNVLPIRQKFLYPKLGSKLN 103
           EE+ LKVKW G +YTVRVC DDT+ ELKRRICELTNVLP+RQK LYPKLGSKLN
Sbjct: 12  EELTLKVKWIGNEYTVRVCADDTVGELKRRICELTNVLPLRQKLLYPKLGSKLN 65


>Glyma05g30160.1 
          Length = 329

 Score = 94.4 bits (233), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 43/54 (79%), Positives = 48/54 (88%)

Query: 50  EEMPLKVKWSGKDYTVRVCGDDTIVELKRRICELTNVLPIRQKFLYPKLGSKLN 103
           EE+ LKVKWSG +YTVRVC DDT+ ELKRRICELTNVLP+RQK LYPKL SKL+
Sbjct: 11  EELTLKVKWSGNEYTVRVCCDDTVGELKRRICELTNVLPLRQKLLYPKLASKLS 64