Miyakogusa Predicted Gene
- Lj2g3v2658300.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2658300.1 tr|D7KDK7|D7KDK7_ARALL Mitochondrial glycoprotein
family protein OS=Arabidopsis lyrata subsp. lyrata,33.66,7e-19,no
description,Mitochondrial glycoprotein; SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL; MAM33,Mi,CUFF.39163.1
(256 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma14g07130.1 359 2e-99
Glyma02g41840.1 356 1e-98
Glyma02g41840.2 259 2e-69
Glyma18g40750.1 194 6e-50
Glyma07g16490.1 193 1e-49
Glyma08g23200.1 90 3e-18
Glyma07g02890.1 88 8e-18
Glyma17g33120.3 77 2e-14
Glyma17g33120.1 77 2e-14
Glyma14g13400.1 77 2e-14
Glyma14g02610.1 57 2e-08
Glyma02g46150.1 57 2e-08
Glyma19g31800.1 56 5e-08
Glyma03g29020.1 52 5e-07
>Glyma14g07130.1
Length = 253
Score = 359 bits (921), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 176/256 (68%), Positives = 198/256 (77%), Gaps = 3/256 (1%)
Query: 1 MAFNSILRKSSPLLRSFAAAGQLIKKTQPGHRAALFAAVNQLHRHQDSVVPRFHFSSVAV 60
MAFNSILRKS R+ A AGQL K + GHR+ F A+NQ H+H+DS VPRFHFSSVA
Sbjct: 1 MAFNSILRKSGSFARALAVAGQLTKNSNLGHRSLHFTAINQ-HQHKDSFVPRFHFSSVAS 59
Query: 61 KNKPTSDETLLRVIESEITCAEETDDHSAEEDLPKNFPFKIVDNPGNQTITLERTYQGEE 120
K KPTSDE LLRVIESEI CA+ETDDH+A E++P NFPFKI+D+PG QTI LERTYQ EE
Sbjct: 60 KKKPTSDENLLRVIESEIECAQETDDHNAAEEVPGNFPFKIIDSPGQQTIMLERTYQDEE 119
Query: 121 IKVQVDMPDLVTXXXXXXXXXXXXXSERAXXXXXXXXXXXXKKGGPFLEFSCMAYSDEIV 180
IKV+V MPDLVT SER KK GP+LEF+C+ Y DEIV
Sbjct: 120 IKVEVHMPDLVTGEENDDDNDNQ--SERTAQSSIPLSISVHKKDGPYLEFNCVGYPDEIV 177
Query: 181 IDSLSVKNPELSEDQIAYEGPDFQDLDESLQKSFHKYLEIRGIKPSTTNFLHEYMINKDS 240
ID LSVKNP+L+EDQ+AYEGP FQ LDE+LQKSFHKYLEIRGIKPSTTNFLHEYMINKDS
Sbjct: 178 IDGLSVKNPDLTEDQVAYEGPGFQTLDENLQKSFHKYLEIRGIKPSTTNFLHEYMINKDS 237
Query: 241 KEYLVWLKKVKSFIQA 256
KEYLVWL K+KSF+QA
Sbjct: 238 KEYLVWLNKLKSFVQA 253
>Glyma02g41840.1
Length = 253
Score = 356 bits (914), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 173/256 (67%), Positives = 197/256 (76%), Gaps = 3/256 (1%)
Query: 1 MAFNSILRKSSPLLRSFAAAGQLIKKTQPGHRAALFAAVNQLHRHQDSVVPRFHFSSVAV 60
MA NSILRKS R+ A +GQL K GHR L A++Q H+HQDS+VPRFHFSSVA
Sbjct: 1 MALNSILRKSGSFARALAVSGQLTKNNHLGHRTLLSTAISQ-HQHQDSLVPRFHFSSVAS 59
Query: 61 KNKPTSDETLLRVIESEITCAEETDDHSAEEDLPKNFPFKIVDNPGNQTITLERTYQGEE 120
K KPTSDE LLR+IESEI CA+ETDDH+A E++P NFPFKI+D+PG QTITLER YQ EE
Sbjct: 60 KKKPTSDENLLRLIESEIECAQETDDHNAAEEVPGNFPFKIIDSPGQQTITLERMYQDEE 119
Query: 121 IKVQVDMPDLVTXXXXXXXXXXXXXSERAXXXXXXXXXXXXKKGGPFLEFSCMAYSDEIV 180
IKV+V MPDLVT SER KKGGP+LEF+C+ Y DEIV
Sbjct: 120 IKVEVHMPDLVTGEENDDDNDND--SERVTQSSIPLSISVLKKGGPYLEFNCVGYPDEIV 177
Query: 181 IDSLSVKNPELSEDQIAYEGPDFQDLDESLQKSFHKYLEIRGIKPSTTNFLHEYMINKDS 240
ID LSVKNP+L+EDQ+AYEGPDFQ LDE+LQKSFH+YLEIRGIKPST NFLHEYMINKDS
Sbjct: 178 IDGLSVKNPDLTEDQVAYEGPDFQGLDENLQKSFHRYLEIRGIKPSTINFLHEYMINKDS 237
Query: 241 KEYLVWLKKVKSFIQA 256
KEYLVWL K+KSF+QA
Sbjct: 238 KEYLVWLNKLKSFVQA 253
>Glyma02g41840.2
Length = 209
Score = 259 bits (663), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 128/204 (62%), Positives = 148/204 (72%), Gaps = 3/204 (1%)
Query: 1 MAFNSILRKSSPLLRSFAAAGQLIKKTQPGHRAALFAAVNQLHRHQDSVVPRFHFSSVAV 60
MA NSILRKS R+ A +GQL K GHR L A++Q H+HQDS+VPRFHFSSVA
Sbjct: 1 MALNSILRKSGSFARALAVSGQLTKNNHLGHRTLLSTAISQ-HQHQDSLVPRFHFSSVAS 59
Query: 61 KNKPTSDETLLRVIESEITCAEETDDHSAEEDLPKNFPFKIVDNPGNQTITLERTYQGEE 120
K KPTSDE LLR+IESEI CA+ETDDH+A E++P NFPFKI+D+PG QTITLER YQ EE
Sbjct: 60 KKKPTSDENLLRLIESEIECAQETDDHNAAEEVPGNFPFKIIDSPGQQTITLERMYQDEE 119
Query: 121 IKVQVDMPDLVTXXXXXXXXXXXXXSERAXXXXXXXXXXXXKKGGPFLEFSCMAYSDEIV 180
IKV+V MPDLVT SER KKGGP+LEF+C+ Y DEIV
Sbjct: 120 IKVEVHMPDLVT--GEENDDDNDNDSERVTQSSIPLSISVLKKGGPYLEFNCVGYPDEIV 177
Query: 181 IDSLSVKNPELSEDQIAYEGPDFQ 204
ID LSVKNP+L+EDQ+AYEGPDFQ
Sbjct: 178 IDGLSVKNPDLTEDQVAYEGPDFQ 201
>Glyma18g40750.1
Length = 254
Score = 194 bits (494), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 113/260 (43%), Positives = 156/260 (60%), Gaps = 12/260 (4%)
Query: 1 MAFNSILRKSSPLLRSFAAAGQLIKK-TQPGHRAALFAAVNQLHRHQD----SVVPRFHF 55
MA ++LR++S AA QL ++ + F +V + R + ++ P F
Sbjct: 1 MAMYAMLRRASS-----AALPQLARRPAMASSSSRTFHSVLSVLRRETATTTTIAPSLRF 55
Query: 56 SSVAVKNKPTSDETLLRVIESEITCAEETDDHSAEEDLPKNFPFKIVDNPGNQTITLERT 115
++ A K ++DE L +V++SEI CA E D + ++P +FPF I DNPG +TI L+
Sbjct: 56 AN-AFATKSSADEHLAQVLQSEIQCALEDDHAQHQVEVPVDFPFDIEDNPGERTIQLKGK 114
Query: 116 YQGEEIKVQVDMPDLVTXXXXXXXXXXXXXSERAXXXXXXXXXXXXKKGGPFLEFSCMAY 175
++ E IKVQVD+P+ V + K+ G LEF A+
Sbjct: 115 FRDEIIKVQVDIPN-VAPEEEHEDDENGNNEKNDSESSIPLVVSVFKENGVSLEFGVTAF 173
Query: 176 SDEIVIDSLSVKNPELSEDQIAYEGPDFQDLDESLQKSFHKYLEIRGIKPSTTNFLHEYM 235
DEI IDSLS+K E SEDQ+AYEGP+F DLDE+LQK+FHKYLEIRGIKPSTTNFL EYM
Sbjct: 174 PDEISIDSLSIKQSEESEDQLAYEGPEFIDLDENLQKAFHKYLEIRGIKPSTTNFLQEYM 233
Query: 236 INKDSKEYLVWLKKVKSFIQ 255
KD+KEYL+WLK +K+F++
Sbjct: 234 FAKDNKEYLMWLKNLKNFVE 253
>Glyma07g16490.1
Length = 253
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 113/259 (43%), Positives = 154/259 (59%), Gaps = 11/259 (4%)
Query: 1 MAFNSILRKSSPLLRSFAAAGQLIKKTQPGHRAA--LFAAVNQLHRHQ--DSVVPRFHFS 56
MA ++LR+ S A QL ++T ++ A++ L R ++ P F+
Sbjct: 1 MAMYAMLRRVSS-----AVLPQLARRTAMASSSSRTFHIALSVLRRETATTTIAPSLRFA 55
Query: 57 SVAVKNKPTSDETLLRVIESEITCAEETDDHSAEEDLPKNFPFKIVDNPGNQTITLERTY 116
+ A K ++DE L +V++SEI CA E D + ++P +FPF I DNPG +TI L+ +
Sbjct: 56 N-AFATKSSADEYLAQVLQSEIQCALEDDHAHHQVEVPVDFPFDIEDNPGERTIQLKGKF 114
Query: 117 QGEEIKVQVDMPDLVTXXXXXXXXXXXXXSERAXXXXXXXXXXXXKKGGPFLEFSCMAYS 176
E IKVQVD+P+ V + K+ G LEF A+
Sbjct: 115 GDETIKVQVDIPN-VAPGEENEDDENGDNEKNDSESSIPLVVSVFKENGVSLEFGVTAFP 173
Query: 177 DEIVIDSLSVKNPELSEDQIAYEGPDFQDLDESLQKSFHKYLEIRGIKPSTTNFLHEYMI 236
DEI IDSLS+K E SEDQ+AYEGP+F DLDE+LQK+FHKYLEIRGIKPSTTNFL EYM
Sbjct: 174 DEISIDSLSIKQCEESEDQLAYEGPEFIDLDENLQKAFHKYLEIRGIKPSTTNFLQEYMF 233
Query: 237 NKDSKEYLVWLKKVKSFIQ 255
KD+KEYL+WLK +K+F++
Sbjct: 234 AKDNKEYLMWLKNLKNFVE 252
>Glyma08g23200.1
Length = 229
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 99/214 (46%), Gaps = 11/214 (5%)
Query: 44 RHQDSVVPRFHFSSVAVKNKPTSDETLLRVIESEITCAEETDDHSAEEDLPKNFPFKIVD 103
+HQ + R + S + K + +LR++ +EI E + K F +
Sbjct: 23 QHQPCISRRSYISDM---RKSAFEGNILRLLRNEIQY--ELQSSPPNNPVTKFNSFIVDG 77
Query: 104 NPGNQTITLERTYQGEEIKVQVDMPDLVTXXXXXXXXXXXXXSERAXXXXXXXXXXXXKK 163
G + ITL+R Y E+IK++V M D S+ K
Sbjct: 78 RAGERWITLKRQYADEDIKLEVTMFDGAVPAPTPTPNGGVVNSDEMQMHITVIVNIS-KG 136
Query: 164 GGPFLEFSCMAYSDEIVIDSLSVKNPELSEDQIA--YEGPDFQDLDESLQKSFHKYLEIR 221
G LE C A+ D I I L ++ +E IA Y GP+F +LD+ LQ + +LE+R
Sbjct: 137 EGRVLEIMCSAWPDSIEIKRLFIR---ANEKIIAEPYAGPEFTELDDELQDKLYDFLEVR 193
Query: 222 GIKPSTTNFLHEYMINKDSKEYLVWLKKVKSFIQ 255
GI FLH+YM NKD E + W+++VKSFI+
Sbjct: 194 GINDELAGFLHQYMKNKDKVELIGWMERVKSFIE 227
>Glyma07g02890.1
Length = 188
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 76/154 (49%), Gaps = 6/154 (3%)
Query: 104 NPGNQTITLERTYQGEEIKVQVDMPDLVTXXXXXXXXXXXXXSERAXXXXXXXXXXXXKK 163
PG + ITL+R Y E+IK++V M S+ K
Sbjct: 37 QPGERWITLKRQYAEEDIKLEVTMFGGAVPAPTPTPNGGVVNSDEMQMHITVIVTIS-KG 95
Query: 164 GGPFLEFSCMAYSDEIVIDSLSVKNPELSEDQIA--YEGPDFQDLDESLQKSFHKYLEIR 221
G LE C A+ D I I L ++ +E IA Y GP+F +LD+ LQ + +LE+R
Sbjct: 96 EGCVLEIMCSAWPDSIEIKRLFIRA---NEKIIAEPYAGPEFMELDDELQYRLYDFLEVR 152
Query: 222 GIKPSTTNFLHEYMINKDSKEYLVWLKKVKSFIQ 255
GI FLH+YM NKD E + W+K+VKSFI+
Sbjct: 153 GINDELACFLHQYMKNKDKAELIGWMKRVKSFIE 186
>Glyma17g33120.3
Length = 234
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 110/251 (43%), Gaps = 24/251 (9%)
Query: 10 SSPLLRSFAAAGQLIKKTQPGHRAALFAAVNQLHRHQDSVVPRFHFSSVAVKNKPTSDET 69
+S L+R+ A + +T P +A FA V R + + K D
Sbjct: 2 ASSLIRTLQRASTSLIRT-PRVSSACFAT--------SRVGARTYAAEPEPATKSPFDSN 52
Query: 70 LLRVIESEITCAEE-TDDHSAEEDLPKNFPFKIVDNPGNQTITLERTY-QGEEIKVQVDM 127
++R++ +EI EE H E F + + G Q +T++ + + E++K++ M
Sbjct: 53 IIRILRNEIEYQEEYAPPHQPETQFNS---FTVEERRGEQVVTIKGKFGEFEDVKIEATM 109
Query: 128 PDLVTXXXXXXXXXXXXXSERAXXXXXXXXXXXXKKGGPFLEFSCMAYSDEIVIDSLSVK 187
D G LEF C A+ D + ++ + +
Sbjct: 110 FDWCEHVPACGDDSSGVN---MRLHLSLIVDIAKGDGDSELEFVCSAWPDCLNVEKVYM- 165
Query: 188 NPELSEDQIA---YEGPDFQDLDESLQKSFHKYLEIRGIKPSTTNFLHEYMINKDSKEYL 244
L ++A Y GPDF+DL +Q+ F++YL++RG+ FLHEYM+NKD E L
Sbjct: 166 ---LRRGRMAARPYVGPDFRDLKAKVQEKFYEYLDVRGVNNELAVFLHEYMMNKDRIELL 222
Query: 245 VWLKKVKSFIQ 255
W+ +KSF++
Sbjct: 223 RWMDSLKSFME 233
>Glyma17g33120.1
Length = 234
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 110/251 (43%), Gaps = 24/251 (9%)
Query: 10 SSPLLRSFAAAGQLIKKTQPGHRAALFAAVNQLHRHQDSVVPRFHFSSVAVKNKPTSDET 69
+S L+R+ A + +T P +A FA V R + + K D
Sbjct: 2 ASSLIRTLQRASTSLIRT-PRVSSACFAT--------SRVGARTYAAEPEPATKSPFDSN 52
Query: 70 LLRVIESEITCAEE-TDDHSAEEDLPKNFPFKIVDNPGNQTITLERTY-QGEEIKVQVDM 127
++R++ +EI EE H E F + + G Q +T++ + + E++K++ M
Sbjct: 53 IIRILRNEIEYQEEYAPPHQPETQFNS---FTVEERRGEQVVTIKGKFGEFEDVKIEATM 109
Query: 128 PDLVTXXXXXXXXXXXXXSERAXXXXXXXXXXXXKKGGPFLEFSCMAYSDEIVIDSLSVK 187
D G LEF C A+ D + ++ + +
Sbjct: 110 FDWCEHVPACGDDSSGVN---MRLHLSLIVDIAKGDGDSELEFVCSAWPDCLNVEKVYM- 165
Query: 188 NPELSEDQIA---YEGPDFQDLDESLQKSFHKYLEIRGIKPSTTNFLHEYMINKDSKEYL 244
L ++A Y GPDF+DL +Q+ F++YL++RG+ FLHEYM+NKD E L
Sbjct: 166 ---LRRGRMAARPYVGPDFRDLKAKVQEKFYEYLDVRGVNNELAVFLHEYMMNKDRIELL 222
Query: 245 VWLKKVKSFIQ 255
W+ +KSF++
Sbjct: 223 RWMDSLKSFME 233
>Glyma14g13400.1
Length = 237
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 61/97 (62%), Gaps = 7/97 (7%)
Query: 162 KKGGPFLEFSCMAYSDEIVIDSLSVKNPELSEDQIA---YEGPDFQDLDESLQKSFHKYL 218
++G LEF C A+ D + ++ + + L ++A Y GPDF+DL +Q++F++YL
Sbjct: 144 EEGDSELEFVCSAWPDCLNVEKVYM----LRRSRMAARPYVGPDFRDLKAKVQETFYEYL 199
Query: 219 EIRGIKPSTTNFLHEYMINKDSKEYLVWLKKVKSFIQ 255
++RG+ FLHEYM+NKD E L W+ +KSF++
Sbjct: 200 DVRGVNNELAIFLHEYMMNKDRIELLRWMDSLKSFME 236
>Glyma14g02610.1
Length = 215
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 168 LEFSCMAYSDEIVIDSLSVKNPELSEDQIA-----YEGPDFQDLDESLQKSFHKYLEIRG 222
L F C Y D + I S+S++ P++ + Y GP F +LDE ++ +FH Y+E RG
Sbjct: 116 LIFLCGLYEDALGIHSVSMR-PKVQDSGYLLIPSQYTGPVFAELDEKMRDAFHSYIEERG 174
Query: 223 IKPSTTNFLHEYMINKDSKEYLVWLKKVKSFIQA 256
+ S FL ++ K+ + + W K + FI
Sbjct: 175 VNESLFKFLQAWLYVKEHRNLMRWFKTMGLFIDG 208
>Glyma02g46150.1
Length = 215
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 168 LEFSCMAYSDEIVIDSLSVKNPELSEDQIA-----YEGPDFQDLDESLQKSFHKYLEIRG 222
L F C Y D + I S+S++ P++ + Y GP F +LDE ++ +FH Y+E RG
Sbjct: 116 LIFLCGLYEDALGIHSVSMR-PKVQDSGYLLIPSQYTGPVFAELDEKMRDAFHSYIEERG 174
Query: 223 IKPSTTNFLHEYMINKDSKEYLVWLKKVKSFIQA 256
+ S FL ++ K+ + + W K + F+
Sbjct: 175 VNESLFKFLQAWLYVKEHRNLMRWFKTMGLFVDG 208
>Glyma19g31800.1
Length = 230
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 7/88 (7%)
Query: 168 LEFSCMAY------SDEIVIDSLSVKNPELSEDQIAYEGPDFQDLDESLQKSFHKYLEIR 221
L+F C Y SD + ++ +++P I Y GP F+ LD+ LQ + +YL +
Sbjct: 124 LQFDCDVYEETDKGSDFDIYNAYYLRSPTCLSPSI-YRGPLFRTLDDELQDALKEYLIAK 182
Query: 222 GIKPSTTNFLHEYMINKDSKEYLVWLKK 249
GI S TNFL Y+ ++ ++Y+ WLKK
Sbjct: 183 GIGVSLTNFLLHYLHKREHEQYMNWLKK 210
>Glyma03g29020.1
Length = 229
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 7/88 (7%)
Query: 168 LEFSCMAY------SDEIVIDSLSVKNPELSEDQIAYEGPDFQDLDESLQKSFHKYLEIR 221
++F C Y SD + ++ +K+ I Y GP F+ LD+ LQ + +YL +
Sbjct: 123 VQFDCDVYEETDKGSDFDIYNAYYLKSSTCLSTSI-YRGPLFRTLDDELQDALKEYLIAK 181
Query: 222 GIKPSTTNFLHEYMINKDSKEYLVWLKK 249
GI S TNFL Y+ ++ ++Y+ WLKK
Sbjct: 182 GIGVSLTNFLLHYLHKREQEQYVNWLKK 209