Miyakogusa Predicted Gene

Lj2g3v2572170.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2572170.1 Non Chatacterized Hit- tr|I1I6P9|I1I6P9_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,40.15,0.000000000000002,seg,NULL; no description,Double-stranded
RNA-binding-like; dsRNA-binding domain-like,NULL;
dsrm,Doub,CUFF.39107.1
         (295 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g07600.1                                                       134   8e-32
Glyma11g33830.1                                                       101   1e-21
Glyma02g41350.1                                                        90   3e-18
Glyma06g10200.2                                                        62   5e-10
Glyma04g10230.1                                                        62   8e-10
Glyma06g10200.1                                                        60   2e-09
Glyma05g10870.1                                                        51   1e-06

>Glyma14g07600.1 
          Length = 459

 Score =  134 bits (338), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 74/140 (52%), Positives = 100/140 (71%), Gaps = 8/140 (5%)

Query: 53  SHGKVAEEEAARLAVDSLTRNITDEGHSLLGEIFSLCKAIVNEYAAKLNLQIPTYNTVQQ 112
           SH K AE EAARLA++S+ +   DEG SL+ +I    K+I+NEYA KL+++ PTYNT QQ
Sbjct: 76  SHKKAAEHEAARLALESILKRTRDEGLSLVNQISPFSKSIMNEYADKLHVEQPTYNTDQQ 135

Query: 113 E--GPLPIFICSLVFDGSTYVGEAAKTKKDAEHLAARAVILSKLGNSGSETIFFQMIKEK 170
           +  G LPIFI SLVF+G++Y G+ A+TKK+AE  AA+A ILS +G+S S T+  ++IK K
Sbjct: 136 QLGGVLPIFITSLVFNGTSYTGDPARTKKEAEQSAAKAAILSIMGDSSSGTVLVEIIKSK 195

Query: 171 ---YNAIK---RNDSQPFYV 184
              Y+AIK   R+ SQP  V
Sbjct: 196 SIFYDAIKGKGRSLSQPSAV 215


>Glyma11g33830.1 
          Length = 357

 Score =  101 bits (251), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 52/115 (45%), Positives = 78/115 (67%), Gaps = 1/115 (0%)

Query: 58  AEEEAARLAVDSLTRNITDEGHSLLGEIFSLCKAIVNEYAAKLNLQIPTYNTVQQEGPLP 117
           AE + AR+A+++L      E   +  E  +L K+I++EYAAKL ++ P YNTVQ EG LP
Sbjct: 72  AEADVARMALENLHVKFKTEERPVTHENTTLSKSILHEYAAKLKVEKPAYNTVQLEGLLP 131

Query: 118 IFICSLVFDGSTYVGEAAKTKKDAEHLAARAVILSKLGNSGSETIFFQMIKEKYN 172
           +F+ S+ F G+TYVG+AA++KK+AE LAAR  I S L +  +  + ++ IK KY+
Sbjct: 132 LFVSSMTFQGTTYVGDAARSKKEAEQLAARNAITSIL-DGATSGLLYETIKSKYS 185


>Glyma02g41350.1 
          Length = 246

 Score = 90.1 bits (222), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 50/98 (51%), Positives = 71/98 (72%), Gaps = 6/98 (6%)

Query: 83  GEIFSLCKAIVNEYAAKLNLQIPTYNTVQQE--GPLPIFICSLVFDGSTYVGEAAKTKKD 140
           G+I    K+I+NEYA KL++Q PTY+TVQ++  G L +F  SLVF+G++Y G+ A+TKK+
Sbjct: 34  GKISPFSKSIMNEYADKLHVQ-PTYDTVQEQLGGVLRVFKTSLVFNGTSYTGDPARTKKE 92

Query: 141 AEHLAARAVILSKLGNSGSETIFFQMIKEK---YNAIK 175
           AE  AA+A ILS +G+S S T   ++IK K   Y+AIK
Sbjct: 93  AEQSAAKAAILSIMGDSTSGTTLIEIIKSKSTFYDAIK 130


>Glyma06g10200.2 
          Length = 359

 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 3/100 (3%)

Query: 56  KVAEEEAARLA-VDSLTRNITDEGHSLLGEIFSLCKAIVNEYAAKLNLQIPTYNTVQQEG 114
           K AE+ AA +A V+ +  N+ ++  +       LCK ++ EYA K+N  +P Y   + E 
Sbjct: 68  KAAEQSAAEVALVELIKSNLVNQSITQPVHETGLCKNLLQEYAQKMNYAMPMYQCKKDET 127

Query: 115 P--LPIFICSLVFDGSTYVGEAAKTKKDAEHLAARAVILS 152
           P    +F C++   G  Y+G AAKTKK+AE  AAR  +L+
Sbjct: 128 PGRASVFSCTVDIGGILYIGGAAKTKKEAEIKAARTALLA 167


>Glyma04g10230.1 
          Length = 359

 Score = 62.0 bits (149), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 38/105 (36%), Positives = 58/105 (55%), Gaps = 13/105 (12%)

Query: 56  KVAEEEAARLAV------DSLTRNITDEGHSLLGEIFSLCKAIVNEYAAKLNLQIPTYNT 109
           K AE+ AA +A+      +++ ++IT   H        LCK ++ EYA K+N  +P Y  
Sbjct: 68  KAAEQSAAEVALVELVKSNAVNQSITQPVHET-----GLCKNLLQEYAQKMNYAMPMYQC 122

Query: 110 VQQEGP--LPIFICSLVFDGSTYVGEAAKTKKDAEHLAARAVILS 152
            + E P    +F C++   G  Y+G AAKTKK+AE  AAR  +L+
Sbjct: 123 KKDETPGRASVFSCTVDIGGILYIGGAAKTKKEAEIKAARTALLA 167


>Glyma06g10200.1 
          Length = 363

 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 58/104 (55%), Gaps = 7/104 (6%)

Query: 56  KVAEEEAARLA-VDSLTRNITDEGHSLLGEIFS----LCKAIVNEYAAKLNLQIPTYNTV 110
           K AE+ AA +A V+ +  N+ ++  +     F     LCK ++ EYA K+N  +P Y   
Sbjct: 68  KAAEQSAAEVALVELIKSNLVNQSITQPVCFFQHETGLCKNLLQEYAQKMNYAMPMYQCK 127

Query: 111 QQEGP--LPIFICSLVFDGSTYVGEAAKTKKDAEHLAARAVILS 152
           + E P    +F C++   G  Y+G AAKTKK+AE  AAR  +L+
Sbjct: 128 KDETPGRASVFSCTVDIGGILYIGGAAKTKKEAEIKAARTALLA 171


>Glyma05g10870.1 
          Length = 140

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 7/98 (7%)

Query: 51  PVSHGKVAEEEAARLAVDSLTRNITDEGHSLLGEIFSLCKAIVNEYAAKLNLQIPTYNTV 110
           P    K A+ +AA LA    +      GH        L K ++ E A K   ++P YNT 
Sbjct: 49  PTRSAKQAQNDAAMLAFLHFSPPSPSTGH------VGLYKNLLQELAQKEGFRLPIYNTN 102

Query: 111 QQ-EGPLPIFICSLVFDGSTYVGEAAKTKKDAEHLAAR 147
           +  E  +PIF+  +  +G  + GE AK+KK AE  AA+
Sbjct: 103 KSGEAHMPIFVSQVEVEGELFTGEEAKSKKQAEMSAAK 140