Miyakogusa Predicted Gene
- Lj2g3v2560100.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2560100.1 Non Chatacterized Hit- tr|I1MBW8|I1MBW8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.52458
PE,77.29,0,SUBFAMILY NOT NAMED,NULL; NUCLEOLAR COMPLEX PROTEIN 4,NULL;
seg,NULL; CBF,CCAAT-binding factor,CUFF.39096.1
(453 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma14g39630.1 682 0.0
Glyma02g41260.1 652 0.0
Glyma09g23040.1 188 9e-48
Glyma06g33640.1 169 4e-42
Glyma14g34320.1 149 6e-36
Glyma09g23050.1 145 7e-35
Glyma18g34780.1 67 3e-11
Glyma18g34800.1 66 7e-11
Glyma18g34760.1 64 4e-10
Glyma18g35000.1 61 3e-09
>Glyma14g39630.1
Length = 600
Score = 682 bits (1759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/443 (77%), Positives = 376/443 (84%), Gaps = 9/443 (2%)
Query: 19 SRNGVADIKTLGEQLLSSASHINNLPLLLTFVSPSSPPRDLIESLISLHSFFLSQLPQLX 78
R GVA++KTLG QLLSSASHINNLPLLL+FVSPSSPP ++ESL+SLHSFFL LP+L
Sbjct: 10 GRYGVAELKTLGNQLLSSASHINNLPLLLSFVSPSSPPHHVLESLLSLHSFFLPLLPKLP 69
Query: 79 XXXXXXXXXXX----XXQFIYLTWLRSKFDEFLKSLIDVLASPQSDEEVKEPVLDTFMEF 134
+FIYL+WLRSKFDEFLKSL+DVLASPQ DE +KE VLDT MEF
Sbjct: 70 SSSSAAAAAPSSGDDQSEFIYLSWLRSKFDEFLKSLLDVLASPQGDETLKELVLDTLMEF 129
Query: 135 IKVANGGSFHSALYHRLLHSIVHSTSSPAFLVDLLASKYFKYIDVRYFTFISLEKLIRTM 194
+KV+NGG+FHS+LYH+LL SIV+STS P FLVDLLASKYFKYIDVRYFTFISL+KL T+
Sbjct: 130 VKVSNGGAFHSSLYHKLLCSIVYSTSPPTFLVDLLASKYFKYIDVRYFTFISLKKLASTL 189
Query: 195 EGKDIS-----GAYRTDEDQLSSNMEYVIDNLYYTLSHVPPLEGSDNTSVLEMWSRSESD 249
EGKD+S A + E Q+SSNME VI N+YYT+SHVPP +GSDNTS LEMWS SESD
Sbjct: 190 EGKDVSDDKIANADGSSESQMSSNMECVIHNMYYTISHVPPHQGSDNTSELEMWSSSESD 249
Query: 250 QKQLSGDMDEDGKQLNPKKLANNVLSAAKIAKKMKLKFTKAWIAYLRLPLTLDLYKEVLV 309
KQL GD D K +K NVLSAAKIAKKMKLKFTKAWIAYLRLPL +D+YKEVLV
Sbjct: 250 HKQLYGDKGADDKPQKFQKPNKNVLSAAKIAKKMKLKFTKAWIAYLRLPLPIDVYKEVLV 309
Query: 310 NLHQAVIPHLSNPIMLCDFLTRSYDVGGVVSVMALSSLFVLMTKYGLEYPKFYEKLYALL 369
NLHQAVIPHLSNPIMLCDFLTRSYDVGGVVSVMALSSLFVLMT+YGLEYP FYEKLYALL
Sbjct: 310 NLHQAVIPHLSNPIMLCDFLTRSYDVGGVVSVMALSSLFVLMTQYGLEYPNFYEKLYALL 369
Query: 370 VPSIFLEKHRARFFELLDSCLKSPLLPAYLAASFTKKLSRLLLSVPPSGALVITALIHNV 429
VPSIF+ KHRARFF+LLDSCLKSPLLPAYLAASF KKLSRLLLSVPPSGALVITALIHN+
Sbjct: 370 VPSIFMAKHRARFFQLLDSCLKSPLLPAYLAASFAKKLSRLLLSVPPSGALVITALIHNI 429
Query: 430 LRRHPSINCLVHREDAVDEGKGD 452
LRRHPSINCLVHRED VDEGKGD
Sbjct: 430 LRRHPSINCLVHREDGVDEGKGD 452
>Glyma02g41260.1
Length = 633
Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/487 (70%), Positives = 374/487 (76%), Gaps = 54/487 (11%)
Query: 19 SRNGVADIKTLGEQLLSSASHINNLPLLLTFVSPSSPPRDLIESLISLHSFFLSQLPQLX 78
R GVA++KTLG QLLSSASHINNLPLLLTFVSPSSPP ++ESL+SLHSFFL LP+L
Sbjct: 10 GRYGVAELKTLGNQLLSSASHINNLPLLLTFVSPSSPPHHVLESLLSLHSFFLPLLPKLP 69
Query: 79 XXXXXXXXXXXXXQFIYLTWLRSKFDEFLKSLIDVLASPQSDEEVKEPVLDTFMEFIKVA 138
+FIYL WLRSKFDEFLKSL+DVLASPQ DE +KE VLDT MEF+KVA
Sbjct: 70 SSSAPSSADDQS-EFIYLAWLRSKFDEFLKSLLDVLASPQGDETLKELVLDTLMEFVKVA 128
Query: 139 NGGSFHSALYHRLLHSIVHSTSSPAFLVDLLASKYFKYIDVRYFTFISLEKLIRTMEGKD 198
NGG+FHS+LYH+LLHSIV+S+S P FLVDLLA+KYFKYIDVRYFTFISL+KL T+EGKD
Sbjct: 129 NGGAFHSSLYHKLLHSIVYSSSPPTFLVDLLATKYFKYIDVRYFTFISLKKLASTLEGKD 188
Query: 199 IS-----GAYRTDEDQLSSN-------------------------------MEYVIDNLY 222
+S A T E QLSS ME VI N+Y
Sbjct: 189 VSDDKIASADGTSESQLSSKLVRPIAIALKLLLLFSISFLCQDMFLDHHSCMECVIHNMY 248
Query: 223 YTLSHVPPLEGSDNTSVLEMWSRSESDQKQLSGDMDEDGKQLNPKKLANNV--------- 273
YT+SHVPP +GSDNTS LEMWS SESD KQLSGD D K +K NV
Sbjct: 249 YTISHVPPHKGSDNTSDLEMWSSSESDHKQLSGDKGADDKPQKSQKPNKNVSYYFLLFAK 308
Query: 274 --------LSAAKIAKKMKLKFTKAWIAYLRLPLTLDLYKEVLVNLHQAVIPHLSNPIML 325
LSAAKIAKKMKLKFTKAWIAYLRLPL D+YKEVLV LHQAVIPHLSNPI+L
Sbjct: 309 LNATPHFVLSAAKIAKKMKLKFTKAWIAYLRLPLPHDVYKEVLVCLHQAVIPHLSNPIIL 368
Query: 326 CDFLTRSYDVGGVVSVMALSSLFVLMTKYGLEYPKFYEKLYALLVPSIFLEKHRARFFEL 385
CDFLTRSYDVGGVVSVMALSSLFVLMT+YGLEYP FY+KLYALLVPSIF+ KHRARFF+L
Sbjct: 369 CDFLTRSYDVGGVVSVMALSSLFVLMTQYGLEYPNFYDKLYALLVPSIFMAKHRARFFQL 428
Query: 386 LDSCLKSPLLPAYLAASFTKKLSRLLLSVPPSGALVITALIHNVLRRHPSINCLVHREDA 445
LDSCLKSPLLPAYLAASF KKLSRLLLSVPPSGALVITALIHN+LRRHPSINCLVHRED
Sbjct: 429 LDSCLKSPLLPAYLAASFAKKLSRLLLSVPPSGALVITALIHNLLRRHPSINCLVHREDG 488
Query: 446 VDEGKGD 452
VDEGKGD
Sbjct: 489 VDEGKGD 495
>Glyma09g23040.1
Length = 157
Score = 188 bits (478), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 102/163 (62%), Positives = 116/163 (71%), Gaps = 14/163 (8%)
Query: 19 SRNGVADIKTLGEQLLSSASHINNLPLLLTFVSPSSPPRDLIESLISLHSFFLSQLPQLX 78
R GVA++KTLG QLL TFVSPSSPP ++ESL+SLHSFFL LP+L
Sbjct: 6 GRYGVAELKTLGNQLLP------------TFVSPSSPPHHVLESLLSLHSFFLPLLPKLS 53
Query: 79 XXXXXXXXXXXXXQ--FIYLTWLRSKFDEFLKSLIDVLASPQSDEEVKEPVLDTFMEFIK 136
Q F YL+WLRSKFDEFLKSL+DVL PQ DE +KE VLDT MEF+K
Sbjct: 54 SHSAFATPSVVGDQSEFSYLSWLRSKFDEFLKSLLDVLTLPQGDETLKELVLDTLMEFVK 113
Query: 137 VANGGSFHSALYHRLLHSIVHSTSSPAFLVDLLASKYFKYIDV 179
VANGG+ HS+LYH+LLHSIV+STS P FLVDLLASKY KYIDV
Sbjct: 114 VANGGALHSSLYHKLLHSIVYSTSPPTFLVDLLASKYVKYIDV 156
>Glyma06g33640.1
Length = 429
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 97/170 (57%), Positives = 114/170 (67%), Gaps = 21/170 (12%)
Query: 19 SRNGVADIKTLGEQLLSSASHINNLPLLLTFVSPSSPPRDLIESLISLHSFFLSQLPQL- 77
R VA++KTLG QLL LTFVSP P ++ESL+S HSFFL LP+L
Sbjct: 10 GRYDVAELKTLGNQLL------------LTFVSP---PHHVLESLLSHHSFFLPLLPKLP 54
Query: 78 -----XXXXXXXXXXXXXXQFIYLTWLRSKFDEFLKSLIDVLASPQSDEEVKEPVLDTFM 132
+FIYL+WLRSKF EFLKSL +VLASPQ DE +KE VLDT M
Sbjct: 55 SSSASAAATTALSVVGDQSEFIYLSWLRSKFYEFLKSLFNVLASPQGDETLKELVLDTLM 114
Query: 133 EFIKVANGGSFHSALYHRLLHSIVHSTSSPAFLVDLLASKYFKYIDVRYF 182
+F+KVANGG+FH + YH+LLHSIV+STS P FLVDLLASKY K+IDVR F
Sbjct: 115 QFVKVANGGAFHPSQYHKLLHSIVYSTSPPTFLVDLLASKYLKHIDVRPF 164
>Glyma14g34320.1
Length = 232
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 99/231 (42%), Positives = 121/231 (52%), Gaps = 70/231 (30%)
Query: 92 QFIYLTWLRSKFDEFLKSLIDVLASPQSDEEVKEPVLDTFMEFIKVANGGSFHSALYHRL 151
+FIY +W RSKF+EFLKSLI+ E VLDT MEF+KVANGG+FHS+LYH+L
Sbjct: 56 EFIYFSWFRSKFEEFLKSLIN------------ELVLDTLMEFVKVANGGTFHSSLYHKL 103
Query: 152 LHSI------------VHSTSSPAFLVDLLAS---KYFKYIDVRYFTFISLEKLIRTMEG 196
LHSI V FL+ LL+S +F V YFTFISL+KL T+EG
Sbjct: 104 LHSISPYIFGRFTSVKVFQVYQCPFLMWLLSSLVLSWFMAYTVFYFTFISLKKLASTLEG 163
Query: 197 KDISGAYRTDEDQLS-SNMEYVIDNLYYTLSHVPPLEGSDNTSVLEMWSRSESDQKQLSG 255
KD+S QL+ ME VI N+YYT+SHVPP +G +V +
Sbjct: 164 KDVSVL------QLNFVYMECVIHNMYYTISHVPPHQGFSFFTVYLI------------- 204
Query: 256 DMDEDGKQLNPKKLANNVLSAAKIAKKMKLKFTKAWIAYLRLPLTLDLYKE 306
MKLKFTKAW AYLR PL +D+YKE
Sbjct: 205 -----------------------FILHMKLKFTKAWTAYLRFPLPIDVYKE 232
>Glyma09g23050.1
Length = 151
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 79/139 (56%), Positives = 93/139 (66%), Gaps = 14/139 (10%)
Query: 19 SRNGVADIKTLGEQLLSSASHINNLPLLLTFVSPSSPPRDLIESLISLHSFFLSQLPQLX 78
R GV ++KT+G QLL LTFVSPSSPP ++ESL S HSFFL LP+L
Sbjct: 5 GRYGVTELKTIGNQLL------------LTFVSPSSPPHHVLESLFSHHSFFLPLLPKLP 52
Query: 79 XXXXXXXXXXXXXQ--FIYLTWLRSKFDEFLKSLIDVLASPQSDEEVKEPVLDTFMEFIK 136
Q FIYL+WL SKFDEFLKSL+DVL +PQ DE +KE VLD MEF+K
Sbjct: 53 SSSAFAAPSVVDDQSEFIYLSWLHSKFDEFLKSLLDVLTTPQGDETLKELVLDMLMEFVK 112
Query: 137 VANGGSFHSALYHRLLHSI 155
VANGG+FHS+LY +LLHSI
Sbjct: 113 VANGGTFHSSLYQKLLHSI 131
>Glyma18g34780.1
Length = 271
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 37/45 (82%)
Query: 265 NPKKLANNVLSAAKIAKKMKLKFTKAWIAYLRLPLTLDLYKEVLV 309
P L VLSAAK+AKKMKLKFTK WIAYLRLPL +D+YKEV++
Sbjct: 163 GPSHLNTLVLSAAKVAKKMKLKFTKEWIAYLRLPLPIDVYKEVVM 207
>Glyma18g34800.1
Length = 271
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 37/45 (82%)
Query: 265 NPKKLANNVLSAAKIAKKMKLKFTKAWIAYLRLPLTLDLYKEVLV 309
P L VLSAAK+AKKMKLKFTK WIAYLRLPL +D+YKEV++
Sbjct: 163 GPSHLNTLVLSAAKVAKKMKLKFTKDWIAYLRLPLPIDVYKEVVM 207
>Glyma18g34760.1
Length = 185
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 34/36 (94%)
Query: 273 VLSAAKIAKKMKLKFTKAWIAYLRLPLTLDLYKEVL 308
VLSAAK++KKMKLKFTK WIAYLRLPL +D+YKEV+
Sbjct: 96 VLSAAKVSKKMKLKFTKEWIAYLRLPLPIDVYKEVI 131
>Glyma18g35000.1
Length = 38
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/36 (77%), Positives = 33/36 (91%)
Query: 273 VLSAAKIAKKMKLKFTKAWIAYLRLPLTLDLYKEVL 308
VLSAA +AKKMKLK+TK WIAYLRLPL +D+YKEV+
Sbjct: 1 VLSAANVAKKMKLKYTKEWIAYLRLPLPIDVYKEVI 36