Miyakogusa Predicted Gene
- Lj2g3v2560000.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2560000.1 Non Chatacterized Hit- tr|A5BLU3|A5BLU3_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,39.09,2e-19,seg,NULL; "Winged helix" DNA-binding domain,NULL;
H15,Histone H1/H5; Linker_histone,Histone H1/H5; A,CUFF.39083.1
(177 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma02g41230.2 147 7e-36
Glyma02g41230.1 147 7e-36
Glyma02g41220.1 147 7e-36
Glyma14g39600.1 143 1e-34
Glyma14g39600.2 139 1e-33
Glyma14g39590.1 136 1e-32
Glyma11g33690.1 129 2e-30
Glyma18g04520.1 122 2e-28
Glyma08g05710.1 64 7e-11
Glyma05g33890.2 64 7e-11
Glyma09g30800.1 64 7e-11
Glyma05g33890.1 64 9e-11
Glyma10g30560.1 64 9e-11
Glyma19g27610.1 62 3e-10
Glyma0856s00200.1 60 1e-09
Glyma20g36880.1 58 6e-09
Glyma20g36880.2 54 7e-08
Glyma11g33680.1 52 4e-07
Glyma02g35070.1 52 5e-07
>Glyma02g41230.2
Length = 176
Score = 147 bits (370), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 94/179 (52%), Positives = 106/179 (59%), Gaps = 5/179 (2%)
Query: 1 MATEEVNKPSSLPPYPEMIMEALESLNKPNGSNKSAISSYIESNHGELPETHATLLILHL 60
MATEEVNKP SLPPYPEMI++ALE+LN+PNGSNKSAIS YIE+ +GELP+ AT+L HL
Sbjct: 1 MATEEVNKPQSLPPYPEMIVKALEALNEPNGSNKSAISKYIETTYGELPD--ATVLGSHL 58
Query: 61 NQMKESGELVFLNNNYMKPDPNXXXXXXXXXXXXXXXXLPLDTVVAXXXXXXXXXKDPNA 120
N+MK+SGEL F NNYMK DPN LP TVV+ KDPNA
Sbjct: 59 NKMKDSGELSFKQNNYMKADPNAPPKRGRGRPPKPKTPLPPGTVVSPPRPRGRPPKDPNA 118
Query: 121 EPK-PKVVSI-ASGRPRGRPKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLTEVSVES 177
PK PK + SGRPRGRPKK QLTEVSVES
Sbjct: 119 PPKSPKAKATPGSGRPRGRPKK-VPRSPAVAAPTAVSSGRPRGRPPKVKPQLTEVSVES 176
>Glyma02g41230.1
Length = 176
Score = 147 bits (370), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 94/179 (52%), Positives = 106/179 (59%), Gaps = 5/179 (2%)
Query: 1 MATEEVNKPSSLPPYPEMIMEALESLNKPNGSNKSAISSYIESNHGELPETHATLLILHL 60
MATEEVNKP SLPPYPEMI++ALE+LN+PNGSNKSAIS YIE+ +GELP+ AT+L HL
Sbjct: 1 MATEEVNKPQSLPPYPEMIVKALEALNEPNGSNKSAISKYIETTYGELPD--ATVLGSHL 58
Query: 61 NQMKESGELVFLNNNYMKPDPNXXXXXXXXXXXXXXXXLPLDTVVAXXXXXXXXXKDPNA 120
N+MK+SGEL F NNYMK DPN LP TVV+ KDPNA
Sbjct: 59 NKMKDSGELSFKQNNYMKADPNAPPKRGRGRPPKPKTPLPPGTVVSPPRPRGRPPKDPNA 118
Query: 121 EPK-PKVVSI-ASGRPRGRPKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLTEVSVES 177
PK PK + SGRPRGRPKK QLTEVSVES
Sbjct: 119 PPKSPKAKATPGSGRPRGRPKK-VPRSPAVAAPTAVSSGRPRGRPPKVKPQLTEVSVES 176
>Glyma02g41220.1
Length = 176
Score = 147 bits (370), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 94/179 (52%), Positives = 106/179 (59%), Gaps = 5/179 (2%)
Query: 1 MATEEVNKPSSLPPYPEMIMEALESLNKPNGSNKSAISSYIESNHGELPETHATLLILHL 60
MATEEVNKP SLPPYPEMI++ALE+LN+PNGSNKSAIS YIE+ +GELP+ AT+L HL
Sbjct: 1 MATEEVNKPQSLPPYPEMIVKALEALNEPNGSNKSAISKYIETTYGELPD--ATVLGSHL 58
Query: 61 NQMKESGELVFLNNNYMKPDPNXXXXXXXXXXXXXXXXLPLDTVVAXXXXXXXXXKDPNA 120
N+MK+SGEL F NNYMK DPN LP TVV+ KDPNA
Sbjct: 59 NKMKDSGELSFKQNNYMKADPNAPPKRGRGRPPKPKAPLPPGTVVSPPRPRGRPPKDPNA 118
Query: 121 EPK-PKVVSI-ASGRPRGRPKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLTEVSVES 177
PK PK + SGRPRGRPKK QLTEVSVES
Sbjct: 119 PPKSPKAKATPGSGRPRGRPKK-VPRSPAVAAPTAVSSGRPRGRPPKVKPQLTEVSVES 176
>Glyma14g39600.1
Length = 176
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/179 (51%), Positives = 105/179 (58%), Gaps = 5/179 (2%)
Query: 1 MATEEVNKPSSLPPYPEMIMEALESLNKPNGSNKSAISSYIESNHGELPETHATLLILHL 60
MATEEVNKP SLPPYPEMI++ALE+LN+ +GSNKSAIS YIE+ +GELP+ T+L HL
Sbjct: 1 MATEEVNKPQSLPPYPEMIVKALEALNEADGSNKSAISKYIETTYGELPDE--TVLGSHL 58
Query: 61 NQMKESGELVFLNNNYMKPDPNXXXXXXXXXXXXXXXXLPLDTVVAXXXXXXXXXKDPNA 120
N+MKESGEL F NNYMK DPN LP TVV+ KDPNA
Sbjct: 59 NKMKESGELAFKQNNYMKADPNAPPKRGRGRPPKPKVPLPPGTVVSPPRPRGRPPKDPNA 118
Query: 121 EPK-PKVVSI-ASGRPRGRPKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLTEVSVES 177
PK PK + A+GRPRGRPKK QLTEVSVES
Sbjct: 119 PPKSPKAKATPATGRPRGRPKK-VARSPAVPSPTAVSTGRPRGRPPKVKPQLTEVSVES 176
>Glyma14g39600.2
Length = 152
Score = 139 bits (350), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/179 (50%), Positives = 104/179 (58%), Gaps = 29/179 (16%)
Query: 1 MATEEVNKPSSLPPYPEMIMEALESLNKPNGSNKSAISSYIESNHGELPETHATLLILHL 60
MATEEVNKP SLPPYPEMI++ALE+LN+ +GSNKSAIS YIE+ +GELP+ T+L HL
Sbjct: 1 MATEEVNKPQSLPPYPEMIVKALEALNEADGSNKSAISKYIETTYGELPDE--TVLGSHL 58
Query: 61 NQMKESGELVFLNNNYMKPDPNXXXXXXXXXXXXXXXXLPLDTVVAXXXXXXXXXKDPNA 120
N+MKESGEL F NNYMK DPN LP TVV+ KDPNA
Sbjct: 59 NKMKESGELAFKQNNYMKADPNAPPKRGRGRPPKPKVPLPPGTVVSPPRPRGRPPKDPNA 118
Query: 121 EPK-PKVVSI-ASGRPRGRPKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLTEVSVES 177
PK PK + A+GRPRGRP K QLTEVSVES
Sbjct: 119 PPKSPKAKATPATGRPRGRPPK-------------------------VKPQLTEVSVES 152
>Glyma14g39590.1
Length = 176
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/179 (50%), Positives = 104/179 (58%), Gaps = 5/179 (2%)
Query: 1 MATEEVNKPSSLPPYPEMIMEALESLNKPNGSNKSAISSYIESNHGELPETHATLLILHL 60
MATEEVNK SLPPYPEMI++ALE+LN+ +GS+KSAIS YIE+ +GELP+ T+L HL
Sbjct: 1 MATEEVNKLQSLPPYPEMIVKALEALNEADGSSKSAISKYIETTYGELPDE--TVLGSHL 58
Query: 61 NQMKESGELVFLNNNYMKPDPNXXXXXXXXXXXXXXXXLPLDTVVAXXXXXXXXXKDPNA 120
N+MKESGEL F NNYMK DPN LP TVV+ KDPNA
Sbjct: 59 NKMKESGELAFKQNNYMKADPNAPPKRGRGRPPKPKVPLPPGTVVSPPRPRGRPPKDPNA 118
Query: 121 EPK-PKVVSI-ASGRPRGRPKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLTEVSVES 177
PK PK + A+GRPRGRPKK QLTEVSVES
Sbjct: 119 PPKSPKAKATPATGRPRGRPKK-VARSPAVPSPTAVSTGRPRGRPPKVKPQLTEVSVES 176
>Glyma11g33690.1
Length = 184
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/142 (52%), Positives = 89/142 (62%), Gaps = 2/142 (1%)
Query: 1 MATEEV-NKPSSLPPYPEMIMEALESLNKPNGSNKSAISSYIESNHGELPETHATLLILH 59
MAT +V NKP SLPPYPEMI EA+E+LN+ NGSNKS+IS YIES +G LP+ H LL +H
Sbjct: 1 MATGQVINKPPSLPPYPEMIREAIEALNEENGSNKSSISKYIESTYGGLPQAHKVLLNVH 60
Query: 60 LNQMKESGELVFLNNNYMKPDPNXXXXXXXXXXXXXXXXLPLDTVVAXXXXXXXXXKDPN 119
L +M+ESG LVF NNY K DPN LP TV++ KDPN
Sbjct: 61 LAKMRESGVLVFWKNNYTKRDPNAPPRRGRGRPPKPKEPLPPGTVLSPPRPRGRPSKDPN 120
Query: 120 AEPKP-KVVSIASGRPRGRPKK 140
KP K + SGRPRGRP+K
Sbjct: 121 DLQKPLKASVVGSGRPRGRPRK 142
>Glyma18g04520.1
Length = 182
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/135 (50%), Positives = 83/135 (61%)
Query: 6 VNKPSSLPPYPEMIMEALESLNKPNGSNKSAISSYIESNHGELPETHATLLILHLNQMKE 65
+NKP SLPPYPEMI+EA+E+LN+ NGSNKS+IS YIES +G LP+ H LL +HL +M++
Sbjct: 7 INKPPSLPPYPEMILEAIEALNEDNGSNKSSISKYIESTYGGLPQGHKVLLNVHLAKMRD 66
Query: 66 SGELVFLNNNYMKPDPNXXXXXXXXXXXXXXXXLPLDTVVAXXXXXXXXXKDPNAEPKPK 125
SG LVF NNY K DP LP TV++ KDPN KP
Sbjct: 67 SGVLVFWKNNYTKRDPKAPPRRGRGRPPKPKEPLPPGTVLSPPRPKGRPPKDPNDPGKPP 126
Query: 126 VVSIASGRPRGRPKK 140
SGRPRGRP+K
Sbjct: 127 KALTESGRPRGRPRK 141
>Glyma08g05710.1
Length = 413
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (65%)
Query: 13 PPYPEMIMEALESLNKPNGSNKSAISSYIESNHGELPETHATLLILHLNQMKESGELVFL 72
PPY EMI A+ +L + +GS+K AI Y+E + +LP TH+ LL HLN++K +G L+ +
Sbjct: 35 PPYDEMIYTAIGALKEKDGSSKRAIGKYMEQVYKDLPPTHSALLTHHLNRLKSAGLLILV 94
Query: 73 NNNYMKP 79
+Y P
Sbjct: 95 KKSYKLP 101
>Glyma05g33890.2
Length = 300
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 42/68 (61%)
Query: 13 PPYPEMIMEALESLNKPNGSNKSAISSYIESNHGELPETHATLLILHLNQMKESGELVFL 72
PPY EMI A+ +L + +GS+K AI YIE + +LP TH LL HLN++K S LV +
Sbjct: 10 PPYDEMIYTAIGALKERDGSSKRAIGKYIEQVYKDLPPTHPALLTHHLNRLKSSALLVLV 69
Query: 73 NNNYMKPD 80
+Y P
Sbjct: 70 KKSYKLPG 77
>Glyma09g30800.1
Length = 469
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 62/131 (47%), Gaps = 10/131 (7%)
Query: 10 SSLPPYPEMIMEALESLNKPNGSNKSAISSYIESNHGELPETHATLLILHLNQMKESGEL 69
S+ PPY EMI A+E+L + +GS+K AI+ YIE + +LP H+ LL HLN +K G L
Sbjct: 36 SNHPPYAEMIYTAIEALKEKDGSSKRAIAKYIEQVYTQLPPNHSDLLTQHLNHLKSRGLL 95
Query: 70 VFLNNNYMKPDPNXXXXXXXXXXXXXXXXLPLDTVVAXXXXXXXXXKDPNAEPKPKVVSI 129
+ +Y P + +P V P EP V +
Sbjct: 96 QMVKKSYALPR-SVPVSVPGPAPTQGTSAVPAAVVAITTTPR------PRDEP---VQAE 145
Query: 130 ASGRPRGRPKK 140
SG+ RGRPKK
Sbjct: 146 GSGKKRGRPKK 156
>Glyma05g33890.1
Length = 383
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 42/67 (62%)
Query: 13 PPYPEMIMEALESLNKPNGSNKSAISSYIESNHGELPETHATLLILHLNQMKESGELVFL 72
PPY EMI A+ +L + +GS+K AI YIE + +LP TH LL HLN++K S LV +
Sbjct: 10 PPYDEMIYTAIGALKERDGSSKRAIGKYIEQVYKDLPPTHPALLTHHLNRLKSSALLVLV 69
Query: 73 NNNYMKP 79
+Y P
Sbjct: 70 KKSYKLP 76
>Glyma10g30560.1
Length = 190
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 45/68 (66%)
Query: 9 PSSLPPYPEMIMEALESLNKPNGSNKSAISSYIESNHGELPETHATLLILHLNQMKESGE 68
P S PP+ MI EA+ SL + GS++ AI+ YIE H ELP T+ L+++HL + +G+
Sbjct: 18 PLSHPPFAVMIAEAIASLKERTGSSQYAITKYIEGKHKELPATYKKLVLVHLKKSVAAGK 77
Query: 69 LVFLNNNY 76
LV + N++
Sbjct: 78 LVKVKNSF 85
>Glyma19g27610.1
Length = 226
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 43/70 (61%)
Query: 10 SSLPPYPEMIMEALESLNKPNGSNKSAISSYIESNHGELPETHATLLILHLNQMKESGEL 69
S+ PPY EMI A+E+L + +GS+K AI+ YIE + +LP H+ LL HL +K G L
Sbjct: 29 SNHPPYAEMIYTAIEALKEKDGSSKRAIAKYIEQVYTQLPPNHSNLLTQHLTHLKSRGLL 88
Query: 70 VFLNNNYMKP 79
+ +Y P
Sbjct: 89 QMVKKSYALP 98
>Glyma0856s00200.1
Length = 195
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 9 PSSLPPYPEMIMEALESLNKPNGSNKSAISSYIESNHGE-LPETHATLLILHLNQMKESG 67
PS+ PPY EMI A+E+L + GS+K AI+ YIE + E LP H+ LL HL +K SG
Sbjct: 35 PSNHPPYAEMIYTAIEALKEKEGSSKRAIAKYIEQVYKEHLPPNHSILLTQHLTLLKSSG 94
Query: 68 ELVFLNNNYMKP 79
L + +Y P
Sbjct: 95 MLQMVKKSYALP 106
>Glyma20g36880.1
Length = 190
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 9 PSSLPPYPEMIMEALESLNKPNGSNKSAISSYIESNHGELPETHATLLILHLNQMKESGE 68
P S P + MI EA+ SL + GS++ AI+ +IE H ELP T+ L+++HL + +G+
Sbjct: 18 PLSHPTFAVMIAEAIASLKERTGSSQYAITKFIEGKHKELPPTYKKLVLVHLKKSVAAGK 77
Query: 69 LVFLNNNY 76
LV + N++
Sbjct: 78 LVKVKNSF 85
>Glyma20g36880.2
Length = 189
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 41/63 (65%)
Query: 14 PYPEMIMEALESLNKPNGSNKSAISSYIESNHGELPETHATLLILHLNQMKESGELVFLN 73
P MI EA+ SL + GS++ AI+ +IE H ELP T+ L+++HL + +G+LV +
Sbjct: 22 PTFAMIAEAIASLKERTGSSQYAITKFIEGKHKELPPTYKKLVLVHLKKSVAAGKLVKVK 81
Query: 74 NNY 76
N++
Sbjct: 82 NSF 84
>Glyma11g33680.1
Length = 149
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 11/62 (17%)
Query: 18 MIMEALESLNKPNGSNKSAISSYIESNHGELPETHATLLILHLNQMKESGELVFLNNNYM 77
MIMEA E+L + NG NKS IS +I+ ++ HLN+MKE G+++F NNYM
Sbjct: 1 MIMEASEALGE-NGENKSTISKHIKIICDDI----------HLNKMKERGQILFWKNNYM 49
Query: 78 KP 79
KP
Sbjct: 50 KP 51
>Glyma02g35070.1
Length = 204
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 37/62 (59%)
Query: 18 MIMEALESLNKPNGSNKSAISSYIESNHGELPETHATLLILHLNQMKESGELVFLNNNYM 77
MI A+E+L + +GS+K AI+ YIE + +LP H+ LL HL +K G L + +Y
Sbjct: 1 MIYTAIEALKEKDGSSKRAIAKYIEQVYTQLPPNHSNLLTQHLTHLKSRGLLQMVKKSYG 60
Query: 78 KP 79
P
Sbjct: 61 LP 62