Miyakogusa Predicted Gene

Lj2g3v2558970.2
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2558970.2 Non Chatacterized Hit- tr|I1MBV2|I1MBV2_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,78.41,0,seg,NULL; Rad4 beta-hairpin domain,Rad4 beta-hairpin
domain 1; Rad4 beta-hairpin domain,Rad4 beta-ha,CUFF.39091.2
         (902 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g39480.1                                                      1130   0.0  

>Glyma14g39480.1 
          Length = 791

 Score = 1130 bits (2922), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 560/755 (74%), Positives = 617/755 (81%), Gaps = 20/755 (2%)

Query: 151 VHKAHLLCLLARGRLIDSACDDPLIXXXXXXXXXXXXXXXXNVTELTSKALHPLIVWFHD 210
           V K HLLCLLARGRLID+ACDDPLI                NVT+LTS AL+PLI WFHD
Sbjct: 54  VLKIHLLCLLARGRLIDNACDDPLIQASLLSLLPAQLLQLSNVTKLTSNALYPLISWFHD 113

Query: 211 NFHVKNCANEDKSPHFALASALESHEGSPEEIAALAVALFRALNLTARFVSILDVASIKP 270
           NFHVKNC N + SPHF LASALESHEGS EEIAAL+VAL RALNLTARFVSILDVA +KP
Sbjct: 114 NFHVKNCTNRETSPHFGLASALESHEGSSEEIAALSVALLRALNLTARFVSILDVAPLKP 173

Query: 271 V--ASGSSKGIFSTSTPMISKLKLDFKSPKKSLSSNEREVVGESSLGRSLKSKKACTTSH 328
           V  ASGSS GIF TSTPMISK KLDFKSP++S+S NE E V ESSL  S KSKK   T+H
Sbjct: 174 VQVASGSSNGIFKTSTPMISKRKLDFKSPQESISCNEIENVCESSLVHSRKSKKCHATNH 233

Query: 329 MTRSKDPPVAKDLNQSVTNSPTSKAHDNNPESYAIDKSHKPKRKGDLEYEMQLEMALSAT 388
                            T+  TS+  D+N E    DKSHK KRKGD+E+EMQLEMALSAT
Sbjct: 234 -----------------TDQSTSETRDSNSELCLTDKSHKSKRKGDIEFEMQLEMALSAT 276

Query: 389 AVECSENKMESGVNAESSNVSCPSKRMKIIKGEESSTSPQVISTAVGPMKVGSPLYWAEI 448
            VEC ++K E+  N +SS+ SCPSKR+K + GE+SSTSPQVISTA+G MKVGSPLYWAE+
Sbjct: 277 TVECKDSKTEASANPDSSSFSCPSKRVKRVIGEDSSTSPQVISTAIGSMKVGSPLYWAEV 336

Query: 449 HSSQENLTGKWVHIDAVNMIIDGEDKVEAMVAACKTSLRYVVAFAGQGAKDVTRRYCMKW 508
           + S+ENLTGKWVH+DA+N+IIDGEDKVE+MVAACKTSLRYVVAFAGQGAKDVTRRYCMKW
Sbjct: 337 YCSEENLTGKWVHVDALNLIIDGEDKVESMVAACKTSLRYVVAFAGQGAKDVTRRYCMKW 396

Query: 509 YKIAPQRVNSTWWDSVLAPLRDLESGATEGVVLSRTNQIVATEANMMDSSAPSRSSLEDI 568
           YKIA  RVNSTWWDSVL PLRDLESGAT GV    TNQI++TE+NM DS  P+RSS+EDI
Sbjct: 397 YKIASHRVNSTWWDSVLKPLRDLESGATGGVAHLGTNQIISTESNMNDSVVPTRSSIEDI 456

Query: 569 ELETRALTEPLPTNQQAYKSHLLYAIEKWLTKYQVLHPKGPILGFCSGHPVYPRTCVQTV 628
           ELETRALTEPLPTNQQAYKSH LYAIEKWLTKYQVLHPKGP+LGFCSGHPVYPRTCVQTV
Sbjct: 457 ELETRALTEPLPTNQQAYKSHPLYAIEKWLTKYQVLHPKGPVLGFCSGHPVYPRTCVQTV 516

Query: 629 KTKERWLREGLQVKPNEHPVKVLKCSIKPQKVQDSEADDNGCSDSKENIKLYGKWQLEPL 688
           KTKERWLREGLQVKPNEHPVK L+ S+KPQKVQDSEADD GC+DS E IKLYGKWQLEPL
Sbjct: 517 KTKERWLREGLQVKPNEHPVKDLQRSMKPQKVQDSEADDYGCTDSIEQIKLYGKWQLEPL 576

Query: 689 ILPHAVNGIVPKNERGQVEVWSEKCLPPGTVHLRLPKAFYVAKRLEIDYAPAMVGFEFRN 748
            LPHAVNGIVPKNERGQV+VWSEKCLPPGTVHLR PKAF VAKRLEIDYAPAMVGFEF+N
Sbjct: 577 NLPHAVNGIVPKNERGQVDVWSEKCLPPGTVHLRFPKAFSVAKRLEIDYAPAMVGFEFKN 636

Query: 749 GRSYPVFDGIVVCAEFKDALLXXXXXXXXXXXXXXXXXXXXQALNRWYQLLSSIVTRQRL 808
           GRSYPVFDGIVVCAEFKD LL                    QAL+RWYQLLSSIVTRQRL
Sbjct: 637 GRSYPVFDGIVVCAEFKDVLLEAYAEEEERRQAEEKKRDETQALSRWYQLLSSIVTRQRL 696

Query: 809 NNRY-NSHLSSEMPSDVQCMNDNVSNATACGSSDENQNPRHHQVEKCDADFDASLSTPVK 867
           NNRY N+ LSS+  + V C+N++ S+AT C ++D++ N R  QV+KCD + D SLST VK
Sbjct: 697 NNRYINNSLSSDKLTGVLCINNDESSATVCDNNDKSPNQRDQQVDKCDTNVDVSLSTSVK 756

Query: 868 DHEHVFLKEYESFDKGTSLLTKRCQCGFSVQVEEL 902
           DHEHVFLKEYESFD+GTSLLTKRCQCGFSVQVEEL
Sbjct: 757 DHEHVFLKEYESFDEGTSLLTKRCQCGFSVQVEEL 791