Miyakogusa Predicted Gene
- Lj2g3v2535450.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2535450.1 Non Chatacterized Hit- tr|C5XC41|C5XC41_SORBI
Putative uncharacterized protein Sb02g024100
OS=Sorghu,47.66,5e-19,seg,NULL,CUFF.39053.1
(207 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma02g40940.1 194 6e-50
Glyma11g33370.1 171 6e-43
Glyma18g04870.1 155 3e-38
>Glyma02g40940.1
Length = 199
Score = 194 bits (493), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 106/204 (51%), Positives = 125/204 (61%), Gaps = 10/204 (4%)
Query: 3 EKPNGEPVKLHYEKTEKESLYDVVYRLVSEPAYTATQLHRIKTSLSPLLPEASRNSFRRL 62
EKPNGE + +LYD V RL+ EP+ +IK SL PL PEASR R+L
Sbjct: 5 EKPNGEE---QVKDNNNNNLYDAVQRLILEPS-------KIKASLIPLFPEASRTYSRQL 54
Query: 63 LLWSRQGSPLRQLLLISIGAVSXXXXXXXXXXXXXXXXXXXXXXIVSLLISXXXXXXXXX 122
L WSRQGSPLR++L ISIG V+ VSLLIS
Sbjct: 55 LHWSRQGSPLRRILFISIGIVALVALSGLVAFTLFFLAATVNAIFVSLLISLAVAGGFLV 114
Query: 123 XXXXXXXXIYIGALSVAIFAVSTVVFWSIVAVMITAGWIGFLYTVWFVTRKSMGFAINSL 182
IYIGALS+AIFA+STV FW++VA++ITAGW+GFLYTVW VT KS+G A SL
Sbjct: 115 LFFAFVTAIYIGALSLAIFAISTVTFWAVVAIIITAGWVGFLYTVWLVTSKSLGLAKQSL 174
Query: 183 CVTGSAISTYSAAWGTRNLVHKDS 206
VTGSAI+TYSAAWGTRNL K+S
Sbjct: 175 SVTGSAITTYSAAWGTRNLADKNS 198
>Glyma11g33370.1
Length = 226
Score = 171 bits (433), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 98/226 (43%), Positives = 131/226 (57%), Gaps = 19/226 (8%)
Query: 1 MAEKPNGEPVKLHYEKTE-----------KESLYDVVYRLVS-----EPAYTATQLHRIK 44
MAE NG V + E+ E KE+L +V+ R+ S EPAY+ + L RIK
Sbjct: 1 MAETSNGNGVYVDEEEQEVVKLKQKTQRVKETLPEVLNRIASAILFPEPAYSGSLLRRIK 60
Query: 45 TSLS---PLLPEASRNSFRRLLLWSRQGSPLRQLLLISIGAVSXXXXXXXXXXXXXXXXX 101
S++ PLLPEAS+NS R +LLW+R+G+P R L +IS+G V+
Sbjct: 61 LSVADHAPLLPEASKNSARDVLLWTRRGTPFRPLFVISVGTVTFVALTALLVFMLFFLAA 120
Query: 102 XXXXXIVSLLISXXXXXXXXXXXXXXXXXIYIGALSVAIFAVSTVVFWSIVAVMITAGWI 161
++SLLIS IYIGAL++AIFA+S FWSIVA++I G+I
Sbjct: 121 TINAIVISLLISLAAAGGFLALFFAFVTAIYIGALAIAIFAISVTTFWSIVAILIITGFI 180
Query: 162 GFLYTVWFVTRKSMGFAINSLCVTGSAISTYSAAWGTRNLVHKDSD 207
GF+YTVW VTRKS GFA +SL VTGSAIS+Y+ A +L+H +S
Sbjct: 181 GFIYTVWLVTRKSFGFAKHSLDVTGSAISSYTTARHAHHLIHTNSK 226
>Glyma18g04870.1
Length = 227
Score = 155 bits (392), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/226 (41%), Positives = 127/226 (56%), Gaps = 20/226 (8%)
Query: 1 MAEKPNGEPVKLHYEKTEK------------ESLYDVVYRLVS-----EPAYTATQLHRI 43
MAE NG V + E+ E+ E+L +V+ R+ S EPA + L RI
Sbjct: 1 MAENSNGNGVYVDEEEEEEEIKLKQKKQRLKETLPEVLNRIASAILFQEPADAGSLLRRI 60
Query: 44 KTSLSP---LLPEASRNSFRRLLLWSRQGSPLRQLLLISIGAVSXXXXXXXXXXXXXXXX 100
K S++ LLPEASRNS R +L+W+R+G+P R L +IS+G V+
Sbjct: 61 KVSVADNATLLPEASRNSARDVLIWTRRGTPFRALFVISVGTVTFVALTGLLVFMLFFLA 120
Query: 101 XXXXXXIVSLLISXXXXXXXXXXXXXXXXXIYIGALSVAIFAVSTVVFWSIVAVMITAGW 160
++SLL+S IYIGALS+AIFA+S FW+IVA+++ GW
Sbjct: 121 ATVNAIVISLLMSLAAAGGFLALFFAFVTAIYIGALSIAIFAISVTTFWAIVAILMITGW 180
Query: 161 IGFLYTVWFVTRKSMGFAINSLCVTGSAISTYSAAWGTRNLVHKDS 206
IGF+YTVW VTRKS GFA +SL VTGSAIS+Y+ A R +H +S
Sbjct: 181 IGFIYTVWLVTRKSFGFAKHSLDVTGSAISSYTTARHARYQIHTNS 226