Miyakogusa Predicted Gene
- Lj2g3v2485570.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2485570.1 Non Chatacterized Hit- tr|F6HG18|F6HG18_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,28.65,0.000000000000003,P-loop containing nucleoside triphosphate
hydrolases,NULL; SUBFAMILY NOT NAMED,NULL; DNA2/NAM7
HELIC,CUFF.38999.1
(534 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma14g38960.1 366 e-101
Glyma08g24100.1 334 2e-91
Glyma18g05200.1 325 6e-89
Glyma05g26540.1 234 1e-61
Glyma11g32920.1 232 9e-61
Glyma20g08150.1 146 4e-35
Glyma06g17340.1 100 5e-21
Glyma19g32390.2 56 1e-07
Glyma03g29540.1 55 1e-07
Glyma19g32390.1 55 1e-07
>Glyma14g38960.1
Length = 795
Score = 366 bits (940), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/378 (53%), Positives = 256/378 (67%), Gaps = 27/378 (7%)
Query: 33 FKYQIPKIPKTFMSIKHYMNSFIPALIEETHSELYSGLISVSQAPFCEISTIEPSRDFNP 92
F Q+ +IP+TFMS Y+NSFIP LIEET S+L S L VS+AP CEI T+ R F
Sbjct: 1 FPSQVQRIPETFMSTSDYLNSFIPPLIEETRSDLCSSLKGVSRAPICEIWTVIRDRFFKL 60
Query: 93 PMGLFYKIKLKSTTEDVQA-----VRKYVPEVGDIFAFTTIRPRSVDDL-NMPENYYHIA 146
P LFY IKLK+ T++V+ + Y PE GDIFAFT IRP+++ DL N P+ Y IA
Sbjct: 61 PNSLFYLIKLKTRTDEVEDEVKEDIGSYEPEPGDIFAFTDIRPKNIGDLINRPKLSYVIA 120
Query: 147 YVERKKDEYTDEISILSSNDMELDAKTDFSSNKAQKLYAVFLMNMTTNVRIWKALHHELE 206
YV +KD T+EI I +S N QKLYA +L+N+TTN+RIWKAL ++ E
Sbjct: 121 YVCGRKDANTNEIPIRASK------------NTKQKLYATYLLNLTTNIRIWKALKYKGE 168
Query: 207 AANMNLVWEVVQADAKRQQSGENCPICLSGENLSPGYSQVQNIIRAQNLNESQKEAVLSC 266
ANMN++ +V+Q D R +NC S + Y +R+QNLNESQ+ A+ SC
Sbjct: 169 EANMNIIKDVLQPDLSRGVDCQNCKCRKSVIPVCKWYP-----LRSQNLNESQEVAISSC 223
Query: 267 FTMRKCHHNSDPIKLIWGPPGTGKTKTVASLLFSLFKSRTRTLACAPTNTAVLGVASRLH 326
TM C H KLIWGPPGTGKTKT+A LL L + R RTLACAPTNTAVL VA+RL
Sbjct: 224 LTM--CDHMV--TKLIWGPPGTGKTKTLACLLRCLLRVRHRTLACAPTNTAVLEVAARLR 279
Query: 327 IIVKDSLELNSYGLGDIVLFGNSSRMKVDSHKGLKEVFLDHRVKDLLPCFLPLTGWKHYL 386
+V SL ++YGLGDIVLFGN SRMKVDS+ GL++VFLDHRV++L CF PL+GWKHYL
Sbjct: 280 NLVNGSLGFDTYGLGDIVLFGNKSRMKVDSYTGLRDVFLDHRVQNLSKCFDPLSGWKHYL 339
Query: 387 ESMIRLLKDPEGEYVLYK 404
ESMI+LL+DP+ +Y Y+
Sbjct: 340 ESMIQLLEDPKEQYSSYE 357
>Glyma08g24100.1
Length = 982
Score = 334 bits (856), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 204/515 (39%), Positives = 290/515 (56%), Gaps = 72/515 (13%)
Query: 15 LIDIVFSWTLEDALTENLFKYQIPKIPKTFMSIKHYMNSFIPALIEETHSELYSGLISVS 74
L+D VFSW+ D L +NL++ Q+ KIP+TF S Y+ SFI L+EETH++L S + +VS
Sbjct: 8 LLDQVFSWSFSDILNQNLYQNQVKKIPETFSSTSIYLRSFILPLVEETHADLLSCVRTVS 67
Query: 75 QAPFCEISTIEPSRDFNPPMGLFYKIKLKSTTEDVQAVRKYVPEVGDIFAFTTIRPRSVD 134
+AP +I+++ +++ P LFY+I T + Q R YVP VGD+ A T +RP+ D
Sbjct: 68 KAPIRQITSVRKTKNHQFPSDLFYQI----TVLEKQGGRAYVPAVGDLIAVTNLRPKYTD 123
Query: 135 DLNMPENYYHIAYVERKKDEYTDEISILSSNDMELDAKTDFSSNKAQKLYAVFLMNMTTN 194
DLN P + A+V R + + I++LSS +L A L+AV+L N+TTN
Sbjct: 124 DLNSPCVF---AFVHRASN---NSITVLSS---KLIAAQGVHDQNKDILFAVYLTNLTTN 174
Query: 195 VRIWKALHHELEAANMNLVWEVVQADAKRQQSGENCPICLSGENLSPGY-SQVQNIIRAQ 253
+RIW++L ELEA N+N++ EV+Q + C C E L G S+++ I
Sbjct: 175 IRIWRSLSSELEARNLNMIDEVLQLRSSE------CGTC--AEWLDNGLNSEIRGKICNS 226
Query: 254 NLNESQKEAVLSCFTMRKCHHNSDPIKLIWGPPGTGKTKTVASLLFSLFKSRTRTLACAP 313
+LN+SQ++AVLSC ++R+ + + +KLIWGPPGTGKTKTV +LF L K + RTL CAP
Sbjct: 227 DLNDSQRDAVLSCISLREEWRHQNSVKLIWGPPGTGKTKTVGLMLFCLLKLKCRTLTCAP 286
Query: 314 TNTAVLGVASRLHIIVK--DSLELNSYGLGDIVLFGNSSRMKVDSHKGLKEVFLDHRVKD 371
TN AVL VA R+ + V+ +S E YGLGDIVLFGN RM +D H L +VFLD+RV
Sbjct: 287 TNVAVLEVAKRVLVQVRKNESHEYGGYGLGDIVLFGNGKRMNIDDHIELHDVFLDYRVNA 346
Query: 372 LLPCFLPLTGWKHYLESMIRLLKDPEGEYVLYKHSENDDDKDLMSLEEFAKKSGTNVEFA 431
L FL + WKH L S+I LL++P+ ++ Y N ++D++ V
Sbjct: 347 LRK-FLGV--WKHSLASIISLLENPQRLFLEYV---NKTEEDVI------------VNDH 388
Query: 432 YRSYKKRNKNRHPMTLEQFVNKNYDYITEQYHIYKHDKKLSAGMTMEQFVRQRFCSIGER 491
+S K P T E+F+NK D S+ E
Sbjct: 389 SQSKKNEQDTAEPWTFEEFINKRLD------------------------------SLREL 418
Query: 492 LKFSMRTLCMHLPTSILPFKAAKKMFRSQELLRSL 526
L FS LC HLPTS + A FR+++LL S+
Sbjct: 419 LTFSFMNLCKHLPTSFISLTDATNTFRARDLLHSI 453
>Glyma18g05200.1
Length = 1063
Score = 325 bits (834), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 196/515 (38%), Positives = 289/515 (56%), Gaps = 57/515 (11%)
Query: 18 IVFSWTLEDALTENLFKYQIPKIPKTFMSIKHYMNSFIPALIEETHSELYSGLISVSQAP 77
++FSW+L D L +L+K ++ +IP F S+ HY+ SFI LIEET ++L S + +S+AP
Sbjct: 1 LIFSWSLGDILNNDLYKDKVRQIPTAFWSVSHYLKSFIFPLIEETRTDLCSSMKMLSEAP 60
Query: 78 FCEISTIEPSRDFNPPMGLFYKIKLKSTTEDVQAVRKYVPEVGDIFAFTTIRPRSVDDLN 137
CEI+ I S D++PP L Y+I++K+ + Y PEVG + A T RP +DDLN
Sbjct: 61 ACEITDINLSEDYSPPHDLLYQIEMKTIVASDKKGDVYEPEVGHLIALTDKRPTCIDDLN 120
Query: 138 MPENYYHIAYVE--RKK--DEYTDEISILSSNDMELDAKTDFSSNKAQKLY--AVFLMNM 191
N Y IA + RKK DE E+ IL+S ++L+ +Y AV+L ++
Sbjct: 121 KHGNSYLIALIRKVRKKNDDENVFEVQILASQPIKLEMYWQEDDKYIYGIYGFAVYLFSL 180
Query: 192 TTNVRIWKALHHELEAANMNLVWEVVQADAKRQQSGENCPICLSGENLSPGYSQVQNIIR 251
TTN+RIW AL+ + + +++ +++Q D+ GENC C S + + S + IR
Sbjct: 181 TTNMRIWNALNSDPDGPVIHVSKQLLQPDSA---VGENCAQCYSFQRYTDDGSMIGAAIR 237
Query: 252 AQNLNESQKEAVLSCFTMRKCHHNSDPIKLIWGPPGTGKTKTVASLLFSLFKSRTRTLAC 311
+LN++Q+E VLSC R+C H + +KLIWGPPGTGKTKTVASLLF+L K + RTL C
Sbjct: 238 LFDLNKAQEEGVLSCLAARECSHK-NTVKLIWGPPGTGKTKTVASLLFALLKKKCRTLTC 296
Query: 312 APTNTAVLGVASRLHIIVKDSLELNSYGLGDIVLFGNSSRMKVDSHKGLKEVFLDHRVKD 371
APTN AVL V SR +V +S++ ++YGLGDI+LFGN RM +D L ++FLD+R
Sbjct: 297 APTNVAVLEVTSRFLRLVTESIDYHTYGLGDILLFGNRKRMSIDDRDDLLDIFLDYRANI 356
Query: 372 LLPCFLPLTGWKHYLESMIRLLKDPEGEYVLYKHSENDDDKDLMSLEEFAKKSGTNVEFA 431
L CF PL+GWKH+LE +I LL++PE +Y ++ + + +K+
Sbjct: 357 LAKCFAPLSGWKHHLEQVILLLENPEEQY-----------REYLKFNKQSKRRSICPRI- 404
Query: 432 YRSYKKRNKNRHPMTLEQFVNKNYDYITEQYHIYKHDKKLSAGMTMEQFVRQRFCSIGER 491
+K NK + +T +FVNK +YI + D
Sbjct: 405 ----QKFNKIQ-ILTFHEFVNKKLNYIWRWMRTFAVD----------------------- 436
Query: 492 LKFSMRTLCMHLPTSILPFKAAKKMFRSQELLRSL 526
+C HLPTS + + K +F +LL+ L
Sbjct: 437 -------MCTHLPTSFISLRQVKCLFECLDLLKVL 464
>Glyma05g26540.1
Length = 1146
Score = 234 bits (598), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 163/511 (31%), Positives = 258/511 (50%), Gaps = 63/511 (12%)
Query: 7 TRENFVNDLIDIVFSWTLEDALTENLFKYQIPKIPKTFMSIKHYMNSFIPALIEETHSEL 66
+R + + +DI+FSW+LED E+L+K ++ I F S++HY S++ L+EET ++L
Sbjct: 2 SRSSGDHGFVDIIFSWSLEDIFNEDLYKDKVEPIDLLFKSVRHYFGSYVYPLLEETRAQL 61
Query: 67 YSGLISVSQAPFCEISTIEPSRDFNPPMGLFYKIKLKSTTEDVQAVRK--YVPEVGDIFA 124
S + +S AP+ E+ ++E + + Y +K S K Y GD+F
Sbjct: 62 CSSMEILSSAPYAEVISLEETYSNGKTL---YNVKTDSWKNRFSGHGKELYKTLFGDLFI 118
Query: 125 FTTIRPRSVDDLNMPENYYHI---AYVERKKDEYTDEISILSSNDMELDAKTDFSSNKAQ 181
+P +V+DL + + A V +++E D I+S+ + D + +
Sbjct: 119 LADFKPETVEDLQRVGRTWTLVLSAGVAEEENE-NDNTDIMSTFKVAASKNIDVNEEGQK 177
Query: 182 KLYAVFLMNMTTNVRIWKALHHELEAANMNLVWEVVQADAKRQ---QSGENCPICLSGEN 238
L+ VFL N+ + RIW ALH N L+ +++ A Q I N
Sbjct: 178 SLFIVFLTNIIPDRRIWSALHM---PGNSMLIKKILCAGGVSMWHFQVVHFFKIFAYSYN 234
Query: 239 --LSPGYSQVQNIIRAQNLNESQKEAVLSCFTMRKCHHNSDPIKLIWGPPGTGKTKTVAS 296
+ G +++ +++ LN SQ EA+ +C + +C H S + LIWGPPGTGKTKT+ +
Sbjct: 235 SWIYDGEYRLRKVVK---LNGSQYEAIWACLSSIQCCHKS-TVDLIWGPPGTGKTKTLGT 290
Query: 297 LLFSLFKSRTRTLACAPTNTAVLGVASRLHIIVKDSLELNS----YGLGDIVLFGNSSRM 352
LL++L K RTL CAPTN AV VASR+ +V++S + NS LGD+VLFGN R+
Sbjct: 291 LLYALLKMNHRTLVCAPTNVAVKEVASRVLSMVRESFDRNSEALFCALGDMVLFGNHERL 350
Query: 353 KVDSHKGLKEVFLDHRVKDLLPCFLPLTGWKHYLESMIRLLKDPEGEYVLYKHSENDDDK 412
KV + +++++LD+RVK L+ CF PLTGW+ SMI LL++ Y ++ +E D+
Sbjct: 351 KVGA--DIEDIYLDYRVKHLMMCFAPLTGWRCCFSSMIDLLENCVSHYHIFIENELRKDQ 408
Query: 413 DLMSLEEFAKKSGTNVEFAYRSYKKRNKNRHPMTLEQFVNKNYDYITEQYHIYKHDKKLS 472
+ +S F K K N H TE+ H
Sbjct: 409 EQVSDNNFNK-------------TKDNSTSHCSE------------TEKVH--------- 434
Query: 473 AGMTMEQFVRQRFCSIGERLKFSMRTLCMHL 503
T +FVR+RF S+ +L+ + LC H+
Sbjct: 435 --KTFLEFVRERFLSVAVQLRDCISVLCTHV 463
>Glyma11g32920.1
Length = 649
Score = 232 bits (591), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 142/271 (52%), Positives = 174/271 (64%), Gaps = 55/271 (20%)
Query: 246 VQNIIRAQNLNESQKEAVLSCFTMRKCHHNSDPIKLIWGPPGTGKTKTVASLLFSLFKSR 305
VQNIIR+QNLN+SQKEAV+SC T R+CHHN D IKLIWGPPGTGKTKTVASLLFSL K +
Sbjct: 9 VQNIIRSQNLNQSQKEAVVSCVTSRECHHN-DTIKLIWGPPGTGKTKTVASLLFSLLKLK 67
Query: 306 TRTLACAPTNTAVLGVASRLHIIVKDSLELNSYGLGDIVLFGNSSRMKVDSHKGLKEVFL 365
RTLACAPTNTAVL VA+RL +V ++LE +++G GDIV+FGN SRMKVDS++ L +VFL
Sbjct: 68 ARTLACAPTNTAVLEVAARLQNLVMETLECDTFGFGDIVVFGNKSRMKVDSYRCLNDVFL 127
Query: 366 DHRVKDLLPCFLPLTGWKHYLESMIRLLKDPEGEYVLYKHSENDDDKDLMSLEEFAKKSG 425
D+RV +LL C +GWKH LESMI+L++ P+ +Y YK E + L SLEEFAK+
Sbjct: 128 DYRVDNLLKC----SGWKHSLESMIKLIEYPKQQYDSYKREE---ENSLKSLEEFAKQ-- 178
Query: 426 TNVEFAYRSYKKRNKNRHPMTLEQFVNKNYDYITEQYHIYKHDKKLSAGMTMEQFVRQRF 485
KK K TMEQ+ QR
Sbjct: 179 ----------KKNIK-----------------------------------TMEQYFMQRL 193
Query: 486 CSIGERLKFSMRTLCMHLPTSILPFKAAKKM 516
S E+L+ MRTL HLPTS++P + KKM
Sbjct: 194 RSNREQLEEYMRTLHTHLPTSLIPLEEIKKM 224
>Glyma20g08150.1
Length = 788
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/339 (29%), Positives = 159/339 (46%), Gaps = 69/339 (20%)
Query: 73 VSQAPFCEISTIEPSRDFNPPMGLFYKIKLKSTTEDV--QAVRKYVPEVGDIFAFTTIRP 130
+ QAP+ E+ I+ ++ P Y +K+ Y GD+ +P
Sbjct: 4 IHQAPYTEVIGIKEAK---PLQNKLYNLKIDGWKNRFSHHGGEPYRTLPGDVLILADYKP 60
Query: 131 RSVDDLNMPENYYHIAYVERKKDEYTDEIS--ILSSNDMELDAKTDFSSNKAQKLYAVFL 188
+V DL + A ++ D S + +S D++L+ + + + L+ +FL
Sbjct: 61 EAVRDLQRIRRLWCFASTVWTTEDEGDSTSLKVKASKDIDLEER------RNKTLFLIFL 114
Query: 189 MNMTTNVRIWKALHHELEAANMNLVWEVVQADAKRQQSGENCPICLSGENLSPGYSQVQN 248
N+ N RIW ALH
Sbjct: 115 TNVNPNRRIWGALH---------------------------------------------- 128
Query: 249 IIRAQNLNESQKEAVLSCFTMRKCHHNSDPIKLIWGPPGTGKTKTVASLLFSLFKSRTRT 308
LNESQ +A+ +C + C+HNS +KLIWGPPGTGKT+T+ +LL++L K + R
Sbjct: 129 ---MPELNESQNKAISACLSGLNCNHNS-AVKLIWGPPGTGKTRTLGTLLYALLKMKYRV 184
Query: 309 LACAPTNTAVLGVASRLHIIVKDSLELNSYGL----GDIVLFGNSSRMKVDSHKGLKEVF 364
L CAPTN A+ VASR+ I+K++ S L G+++LFG + R+K+ + +++V+
Sbjct: 185 LVCAPTNVAIKEVASRVVDIMKEAHSKESGDLFCSMGEVLLFGYNERLKIG--EDVEDVY 242
Query: 365 LDHRVKDLLPCFLPLTGWKHYLESMIRLLKDPEGEYVLY 403
LDHRV+ L CF P G+ L+SMI L+ +Y +Y
Sbjct: 243 LDHRVQQLTECFSPYNGFSSSLKSMIGFLEYCVSDYHIY 281
>Glyma06g17340.1
Length = 475
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 89/154 (57%), Gaps = 8/154 (5%)
Query: 255 LNESQKEAVLSCFTMRKCHHNSDPIKLIWGPPGTGKTKTVASLLFSLFKSRTRTLACAPT 314
LNESQ +A+ +C + KC+HNS +KL+ G P K K F+L K + R L CAPT
Sbjct: 17 LNESQNKAISACLSGHKCNHNS-VVKLM-GSPWDRKDKIFGHTTFALLKMKYRVLVCAPT 74
Query: 315 NTAVLGVASRLHIIVKDSLELNSYGL----GDIVLFGNSSRMKVDSHKGLKEVFLDHRVK 370
N A+ VASR+ +VK+S S L GD++L GN+ R+K+ + +K+++LDH +
Sbjct: 75 NIAIKEVASRVVTLVKESHAKESGDLFCSMGDLLLSGNNERLKIG--EDIKDIYLDHLAQ 132
Query: 371 DLLPCFLPLTGWKHYLESMIRLLKDPEGEYVLYK 404
L C P TG L+SMI L++ Y + K
Sbjct: 133 QLAECLAPSTGLSSCLKSMIGFLENCTSYYHIVK 166
>Glyma19g32390.2
Length = 579
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 253 QNLNESQKEAVLSCFTMRKCHHNSDPIKLIWGPPGTGKTKTVASLLFSLFKSRTRTLACA 312
+NL+ SQKEAV + S + L+ GPPGTGKT TV ++ K ++ LACA
Sbjct: 127 KNLDHSQKEAVSKALS-------SKNVFLLHGPPGTGKTTTVVEIILQEVKRGSKILACA 179
Query: 313 PTNTAVLGVASRL 325
+N AV + RL
Sbjct: 180 ASNIAVDNIVERL 192
>Glyma03g29540.1
Length = 648
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 253 QNLNESQKEAVLSCFTMRKCHHNSDPIKLIWGPPGTGKTKTVASLLFSLFKSRTRTLACA 312
+NL+ SQKEAV + S + L+ GPPGTGKT TV ++ K ++ LACA
Sbjct: 196 KNLDHSQKEAVSKALS-------SKNVFLLHGPPGTGKTTTVVEIILQEVKRGSKILACA 248
Query: 313 PTNTAVLGVASRL 325
+N AV + RL
Sbjct: 249 ASNIAVDNIVERL 261
>Glyma19g32390.1
Length = 648
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 253 QNLNESQKEAVLSCFTMRKCHHNSDPIKLIWGPPGTGKTKTVASLLFSLFKSRTRTLACA 312
+NL+ SQKEAV + S + L+ GPPGTGKT TV ++ K ++ LACA
Sbjct: 196 KNLDHSQKEAVSKALS-------SKNVFLLHGPPGTGKTTTVVEIILQEVKRGSKILACA 248
Query: 313 PTNTAVLGVASRL 325
+N AV + RL
Sbjct: 249 ASNIAVDNIVERL 261