Miyakogusa Predicted Gene

Lj2g3v2475540.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2475540.1 tr|G7J7W0|G7J7W0_MEDTR Intracellular protease
OS=Medicago truncatula GN=MTR_3g064140 PE=4 SV=1,86.02,0,Class I
glutamine amidotransferase-like,NULL; PUTATIVE THIJ FAMILY
INTRACELLULAR PROTEASE/AMIDASE,NU,CUFF.38994.1
         (194 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g05220.1                                                       332   1e-91
Glyma18g05230.1                                                       179   2e-45
Glyma11g32880.1                                                        74   1e-13
Glyma13g34650.1                                                        47   9e-06

>Glyma18g05220.1 
          Length = 387

 Score =  332 bits (851), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 157/186 (84%), Positives = 168/186 (90%)

Query: 7   IFQLQDYMEDYEVTVPFQSLQALGCHVDAVCPKKKAGDTCPTAIHDFEGDQTYSEKPGYD 66
           +F   DYMEDYEV VPFQSLQALGCHVDAVCP KKAGDTCPTA+HDFEGDQTYSEKPG+ 
Sbjct: 200 LFICGDYMEDYEVKVPFQSLQALGCHVDAVCPSKKAGDTCPTAVHDFEGDQTYSEKPGHT 259

Query: 67  FTLNADYDGLKPSSYDALVIPGGRSPAYLALNQSVIALVKHFMESKKPVASICHGQQILA 126
           F L A +D + PS YDALVIPGGR+P YLALN+SVIALVK+F E+KKPVASICHGQQIL+
Sbjct: 260 FALTATFDDVDPSGYDALVIPGGRAPEYLALNESVIALVKYFFENKKPVASICHGQQILS 319

Query: 127 AAGVLKGRKCTAYPAVKLNVVLSRATWLEPDPIERCFTDGNLVTGAAWPGHPEFIPQLMV 186
           AAGVLKGRKCTAYPAVKLNVVLS ATWLEPDPI RCFTDGNLVTGAAWPGHPEFI QL+ 
Sbjct: 320 AAGVLKGRKCTAYPAVKLNVVLSGATWLEPDPISRCFTDGNLVTGAAWPGHPEFIAQLIA 379

Query: 187 LLGIQV 192
           LLGIQV
Sbjct: 380 LLGIQV 385



 Score =  201 bits (510), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 98/181 (54%), Positives = 124/181 (68%)

Query: 12  DYMEDYEVTVPFQSLQALGCHVDAVCPKKKAGDTCPTAIHDFEGDQTYSEKPGYDFTLNA 71
           D+MEDYE  VPFQ+LQA G  VDAVCP KK+GD C TA+H   G QTYSE  G++F+LNA
Sbjct: 12  DFMEDYEAMVPFQALQAFGLAVDAVCPGKKSGDVCRTAVHVLAGAQTYSETVGHNFSLNA 71

Query: 72  DYDGLKPSSYDALVIPGGRSPAYLALNQSVIALVKHFMESKKPVASICHGQQILAAAGVL 131
            +D +  +SYD L +PGGR+P YLA    V+ LV  F+   K +ASICHGQ ILAAAGV+
Sbjct: 72  TFDEVDAASYDGLWVPGGRAPEYLAHVPGVVELVTKFVSLGKQIASICHGQLILAAAGVV 131

Query: 132 KGRKCTAYPAVKLNVVLSRATWLEPDPIERCFTDGNLVTGAAWPGHPEFIPQLMVLLGIQ 191
           KGR CTA+P VK  +V + A W+EPD       DG+L+T A + GHPE I   +  LG +
Sbjct: 132 KGRTCTAFPPVKPVLVAAGAHWVEPDTEAATVVDGDLITAATYEGHPELIRHFVKALGGK 191

Query: 192 V 192
           +
Sbjct: 192 I 192


>Glyma18g05230.1 
          Length = 310

 Score =  179 bits (453), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 83/126 (65%), Positives = 99/126 (78%)

Query: 7   IFQLQDYMEDYEVTVPFQSLQALGCHVDAVCPKKKAGDTCPTAIHDFEGDQTYSEKPGYD 66
           +F   D++ED++  VPFQSLQ+LGCHVDA+CP K AGD CPTA+HDFEGDQTYSEK G+ 
Sbjct: 181 LFICGDFVEDFQAKVPFQSLQSLGCHVDAICPSKFAGDFCPTAVHDFEGDQTYSEKHGHH 240

Query: 67  FTLNADYDGLKPSSYDALVIPGGRSPAYLALNQSVIALVKHFMESKKPVASICHGQQILA 126
           F L   +D + PS YDALVIPGGRSP YL+L   ++ LV+HF  + KPV SI HGQQILA
Sbjct: 241 FDLTVAFDDVDPSDYDALVIPGGRSPEYLSLMDPILDLVRHFFLNNKPVGSIGHGQQILA 300

Query: 127 AAGVLK 132
           AAGVLK
Sbjct: 301 AAGVLK 306



 Score =  178 bits (452), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 88/172 (51%), Positives = 112/172 (65%)

Query: 21  VPFQSLQALGCHVDAVCPKKKAGDTCPTAIHDFEGDQTYSEKPGYDFTLNADYDGLKPSS 80
           VPFQ+LQA G  VD VCP +KAGD C TAIH   GDQTYSE  G+ F LNA +D +  SS
Sbjct: 2   VPFQALQAFGLTVDTVCPGRKAGDVCRTAIHGIHGDQTYSEMIGHKFVLNATFDEVDASS 61

Query: 81  YDALVIPGGRSPAYLALNQSVIALVKHFMESKKPVASICHGQQILAAAGVLKGRKCTAYP 140
           YD L +PGGRSP YL+    V+ LV  F+   K +AS CHG  ILAA+GVLKGRKCT +P
Sbjct: 62  YDVLWVPGGRSPEYLSRVPGVLELVTKFVSLGKLIASTCHGPLILAASGVLKGRKCTGFP 121

Query: 141 AVKLNVVLSRATWLEPDPIERCFTDGNLVTGAAWPGHPEFIPQLMVLLGIQV 192
           ++K  +V + A W++PD +     DG  +T   + G PE I  L+  LG ++
Sbjct: 122 SLKPVLVDAGADWVDPDTMTTTVEDGGFITSTTYEGQPEIISLLVKALGGKI 173


>Glyma11g32880.1 
          Length = 261

 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 35/59 (59%), Positives = 43/59 (72%)

Query: 81  YDALVIPGGRSPAYLALNQSVIALVKHFMESKKPVASICHGQQILAAAGVLKGRKCTAY 139
           YD L +PGGR+P YLA    V+ LV  F+   K +ASICHGQ ILAAAGV++GRKCT +
Sbjct: 1   YDGLWVPGGRAPEYLAHIPGVVELVTKFVSLGKQIASICHGQLILAAAGVVEGRKCTLF 59



 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/48 (52%), Positives = 31/48 (64%)

Query: 57  QTYSEKPGYDFTLNADYDGLKPSSYDALVIPGGRSPAYLALNQSVIAL 104
           QTYSEKPG+ F L A +D + PS YDALVIPGG +  Y      ++ L
Sbjct: 85  QTYSEKPGHTFALTATFDDVDPSGYDALVIPGGLNDPYNQARSQILML 132


>Glyma13g34650.1 
          Length = 394

 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 8/103 (7%)

Query: 80  SYDALVIPGGRSPA-YLALNQSVIALVKHFMESKKPVASICHG-QQILAAAGVLKGRKCT 137
           SYD +V+PGG   A   A ++++++L+K   ES K   +IC     +L   G+LKG+K T
Sbjct: 272 SYDLIVLPGGLGGAQTFANSETLVSLLKKQRESNKYYGAICASPALVLEPHGLLKGKKAT 331

Query: 138 AYPAVKLNVVLSRATWLEPDPIERCFTDGNLVTGAAWPGHPEF 180
           A+P +     LS  + +E     R   DGNL+T        EF
Sbjct: 332 AFPVMCDK--LSDQSEVE----NRVVVDGNLITSRGPGTSIEF 368