Miyakogusa Predicted Gene

Lj2g3v2459310.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2459310.1 Non Chatacterized Hit- tr|D7LZX4|D7LZX4_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,45.19,4e-17,seg,NULL,CUFF.38989.1
         (731 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g31820.1                                                       338   1e-92
Glyma18g05470.1                                                       271   2e-72
Glyma14g38880.1                                                       248   2e-65
Glyma02g40570.1                                                       133   6e-31

>Glyma11g31820.1 
          Length = 674

 Score =  338 bits (868), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 227/464 (48%), Positives = 256/464 (55%), Gaps = 94/464 (20%)

Query: 285 PGKLVSVPATVSSLVMEKSNNGSGGGE------IKRVAVKRNXXXXXXXXXXXXXXXXXX 338
           PGK+VSVPATVSSLVM+KSNN +G GE      IKR+AVKRN                  
Sbjct: 288 PGKMVSVPATVSSLVMDKSNN-NGSGESGATTGIKRIAVKRNVGAASP------------ 334

Query: 339 XXXXXNGRSQSPARANGIAANG-KVLGENXXXXXXXXXPSLSRNNSARKAEHSPYRRNPL 397
                  RSQSPARANG  ANG K   EN         PSLSR+NS RKAE SPY+RNPL
Sbjct: 335 -------RSQSPARANGNGANGNKAFSENQQQ------PSLSRSNS-RKAEQSPYKRNPL 380

Query: 398 SEVDPNSLAYPQSNTN---GKVQNKPKKEIEPEANQKSNIDMNDNTRNRTSNRVALEKGV 454
           SE++PNSLA+P S TN    +VQN+PKKE E EANQK+N            NR A +KGV
Sbjct: 381 SEIEPNSLAFPHSTTNNSSSRVQNRPKKEFETEANQKTN-----------GNRTASDKGV 429

Query: 455 GGNCKAKEHHQEEEIKV---LPDNAVVKTVIVPSGVDNHKPQTLTXXXXXXXXXXDLDIN 511
             NCK K   QEE++KV   + DN VVKT +VP GVDN KP              +LDIN
Sbjct: 430 TINCKTKVQ-QEEDVKVQSSITDNVVVKT-MVPPGVDNLKPPYTLTRSRSSRRSQELDIN 487

Query: 512 PEALLNPP-LTYTSLLLEDIHNFHQKNTQQQPSVSLPACLTKACSILEAVADLXXXXXXX 570
            EALLNPP  +Y SLLLEDI NFHQKNT   P VSLPAC+TKACSILEAVADL       
Sbjct: 488 CEALLNPPPQSYASLLLEDIQNFHQKNT---PPVSLPACVTKACSILEAVADLNSNAGLN 544

Query: 571 XXXXXHQGKRVADTKDPFXXXXXXXXXXXMEPSLHKYVTVKRGGSI---DMDDQEXXXXX 627
                       D + P            MEP+LHKYVTV RGGS+   DMDDQE     
Sbjct: 545 FCSGE-------DRRSPLAFQLFNDDDV-MEPNLHKYVTVNRGGSLGGADMDDQESSGSN 596

Query: 628 XXXXXXAQQHWGVXXXXXXXXXXXXTDCWTSRLNNSRDECQKCPXXXXXXXXXXDMVEAR 687
                  QQHWGV             DCWTSR N S++ECQ+ P                
Sbjct: 597 SFTVSSGQQHWGVSSSSWEPSSVESKDCWTSRSNYSKEECQRSPL--------------- 641

Query: 688 KKKTLNSERRDCDHQHSGGIGRGRLGSNKGLHNTLPVVTAAAST 731
                       +  H  GIGRGRLG+NK LHN +PVVTAAAST
Sbjct: 642 ----------GLEGTHGSGIGRGRLGANKVLHN-IPVVTAAAST 674



 Score = 89.0 bits (219), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/225 (33%), Positives = 95/225 (42%), Gaps = 52/225 (23%)

Query: 1   MGACLX----XXXXXXXXXXXXTAPPQPKNSENVVT--VTMSKPEVVSPKNKKLDTE--- 51
           MGACL                 T P    NS   V+  V +SKP V   K KK +++   
Sbjct: 1   MGACLSKKKGSSTATTKSAASSTVPELKNNSPFSVSGVVNVSKPNVEEVKLKKDNSKKGK 60

Query: 52  -------IAKEDEGQVKKEIFIIKHRKSHDE------RERNCKIPPYSPQKNLQAKSGDG 98
                  +  E EG VKKEIFIIKHRK+HD+         N K PP++ +  +  K+   
Sbjct: 61  EEKKHETVPPEPEGHVKKEIFIIKHRKNHDDNNNRVRNNSNSKSPPFTEESTICDKTA-- 118

Query: 99  LSSSEAESMGXXXXXXXXXXXXXPSTPNM----AVTGVRTSSCTKEEVDAILIQCXXXXX 154
                                    T NM       GVRTSSCTKEEVDAILIQC     
Sbjct: 119 ------------------------PTANMGGGGGGVGVRTSSCTKEEVDAILIQCGRLSR 154

Query: 155 XXXXXXXXXXXXXXXXXXXXXFDFDHCDNDAVSAEDETKRANGSD 199
                                +DFDHCDND VS +D++K+ N ++
Sbjct: 155 SSSGNAIAAEHKRRYSGSKRSYDFDHCDNDTVSNDDDSKKVNANE 199


>Glyma18g05470.1 
          Length = 625

 Score =  271 bits (692), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 186/381 (48%), Positives = 213/381 (55%), Gaps = 86/381 (22%)

Query: 285 PGKLVSVPATVSSLVMEKSN----------NGSGGGEIKRVAVKRNXXXXXXXXXXXXXX 334
           PGK+VSVPATVSSLVM+KSN          +G+  G IKR+ VKRN              
Sbjct: 280 PGKMVSVPATVSSLVMDKSNNNGGGGGGGESGATTG-IKRITVKRNVGAASP-------- 330

Query: 335 XXXXXXXXXNGRSQSPARANGIAANG-KVLGENXXXXXXXXXPSLSRNNSARKAEHSPYR 393
                      RSQSPARANG AA+G K   EN         PSLSR+NS RKAE SPY+
Sbjct: 331 -----------RSQSPARANGNAASGNKAFNENQQQ------PSLSRSNS-RKAEQSPYK 372

Query: 394 RNPLSEVDPNSLAYPQS---NTNGKVQNKPKKEIEPEANQKSNIDMNDNTRNRTSNRVAL 450
           RNPLSE++PNSLA+P S   N++ KVQN+PKKE E EANQK+N            +R AL
Sbjct: 373 RNPLSEIEPNSLAFPHSTANNSSSKVQNRPKKEFETEANQKTN-----------GSRTAL 421

Query: 451 EKGVGGNCKAKEHHQEEEIKV---LPDNAVVKTVIVPSGVDNHKPQTLTXXXXXXXXXXD 507
           +KG+  NCK K   QEE++KV   + DN VVKT +VP GVDN KP              D
Sbjct: 422 DKGMNVNCKTKVQ-QEEDVKVQSSITDNVVVKT-MVPPGVDNLKPPYTLTRSRSSRQSRD 479

Query: 508 LDINPEALLNPPLTYTSLLLEDIHNFHQKNTQQQPSVSLPACLTKACSILEAVADLXXXX 567
           LD+NPEALLNPP +Y SLLLEDI NFHQKNT   P VSLPAC+TKACSILEAVADL    
Sbjct: 480 LDLNPEALLNPPQSYASLLLEDIQNFHQKNT---PPVSLPACVTKACSILEAVADLNSNA 536

Query: 568 ----------------------XXXXXXXXHQGKRVADTKDPFXXXX-XXXXXXXMEPSL 604
                                           GKR  D +DP             ME SL
Sbjct: 537 GLNFCGAEDRRSPLAFQCSRNDYNVSLTTHDYGKREPDAEDPVVESMLLFNDDDVMEQSL 596

Query: 605 HKYVTVKRG---GSIDMDDQE 622
           HKYVTV RG   G +DMDDQE
Sbjct: 597 HKYVTVNRGGLLGGVDMDDQE 617



 Score =  106 bits (265), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 86/223 (38%), Positives = 106/223 (47%), Gaps = 49/223 (21%)

Query: 1   MGACLXXXX------XXXXXXXXXTAPPQPKNSE-NVVTVTMSKPEV---VSPK------ 44
           MGACL                    A P+ KN+  +V  VT+SKP+V    +P+      
Sbjct: 1   MGACLSKKKGSSSTATKSASSTAHVAVPELKNNPPSVSGVTVSKPKVETETAPEVKLNKD 60

Query: 45  -NKKLDT--EIAKEDEGQVKKEIFIIKHRKSHDERER--NCKIPPYSPQKNLQAKSGDGL 99
            +KK++   E   E EG VKKEIFIIKHRKSHD+RER  N K P ++             
Sbjct: 61  NSKKVEEKHETVPEPEGHVKKEIFIIKHRKSHDDRERNSNSKSPSFT------------- 107

Query: 100 SSSEAESMGXXXXXXXXXXXXXPSTPNMAVTGVRTSSCTKEEVDAILIQC---XXXXXXX 156
                ESM              PST NM V GVRTSSCTKEEVDAILIQC          
Sbjct: 108 ----EESMA-------DKTAPTPST-NMGVVGVRTSSCTKEEVDAILIQCGRLSRSSSGN 155

Query: 157 XXXXXXXXXXXXXXXXXXXFDFDHCDNDAVSAEDETKRANGSD 199
                              +DFDHCDND VS +D++K+AN ++
Sbjct: 156 AAAAASGEHRRRYSGSKRSYDFDHCDNDTVSNDDDSKKANANE 198


>Glyma14g38880.1 
          Length = 534

 Score =  248 bits (633), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 187/445 (42%), Positives = 212/445 (47%), Gaps = 127/445 (28%)

Query: 285 PGKLVSVPATVSSLVMEKSNNGSGGGEIKRVAVKRNXXXXXXXXXXXXXXXXXXXXXXXN 344
           PGK+VSVPATVSSLVM+KSNN  G    KR+ VKRN                        
Sbjct: 199 PGKMVSVPATVSSLVMDKSNNCGGESGAKRITVKRNVGDAGSRGTASP------------ 246

Query: 345 GRSQSPARANGIAANGKVLGENXXXXXXXXXPSLSRNNSARKAEHSPYRRNPLSEVDPNS 404
            R+QSPAR +                      SL +N S  KAE SPYRRNPLSEVD   
Sbjct: 247 -RAQSPARESRTI-------------------SLQKNPS-EKAEQSPYRRNPLSEVD--- 282

Query: 405 LAYPQSNTNGKVQ-NKPKKEIEPEANQKSNIDMNDNTRNRTSNRVALEKGVGGNCKAKEH 463
                  TN KVQ NKPK  IE EA                                   
Sbjct: 283 -------TNRKVQQNKPK--IEGEA----------------------------------- 298

Query: 464 HQEEEIKVLPDNAVVKTVIVPSGVDNHKPQTLTXXXXXXXXXXDLDI-NPEALLNPPLTY 522
                         ++T +V SGVDN KPQ LT          DLDI NPEA++NP  +Y
Sbjct: 299 --------------IQTTVVSSGVDNLKPQGLTRSRSSRRSR-DLDISNPEAVVNPTNSY 343

Query: 523 TSLLLEDIHNFHQKNTQQQ-PSVSLPACLTKACSILEAVADLXXXXXXXXXXXXHQGKRV 581
            SLLLEDI NFHQKNTQQQ  S+SLPACL KACSILEAVADL                  
Sbjct: 344 ASLLLEDIQNFHQKNTQQQQSSISLPACLNKACSILEAVADLN----------------- 386

Query: 582 ADTKDPFXXXXXXXXXXXMEPSLHKYVTVKRGGSI--DMDDQEXXXXXXXXXXXA--QQH 637
           + T   F           MEPSLHKYVTVKRGG +   M+DQE           +  Q H
Sbjct: 387 STTSSNFTEDKRTVSDDVMEPSLHKYVTVKRGGGVVDMMEDQESSGSNSFTVSSSGQQHH 446

Query: 638 WG--VXXXXXXXXXXXXTDCWTS-RLN-NSRDECQKCPXXXXXXXXXXDMVEARKKKTLN 693
           WG  +            TDCWTS RL+    +E QK P             EA+KKK LN
Sbjct: 447 WGNNISCSSWEPNSADSTDCWTSSRLSFREEEEDQKTPLELGCSLSS----EAKKKKGLN 502

Query: 694 SERRDCDHQHSGGIGRGRLGSNKGL 718
           S+RR+CDH+HS GIGRGRLGSNKG+
Sbjct: 503 SKRRECDHEHSSGIGRGRLGSNKGM 527



 Score = 70.1 bits (170), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 46/94 (48%), Positives = 53/94 (56%), Gaps = 9/94 (9%)

Query: 1  MGACLXXXXXXXXXXXXXTAPPQPKNSENVVTVTMSKPEV--VSPKNKKLD-----TEIA 53
          MG CL              +  Q +NSEN VTVT+SKP    VS KNK L      +E A
Sbjct: 1  MGTCLSKKNGSSTSPNKSDS--QHRNSENSVTVTLSKPTEPEVSLKNKTLQEKQQGSESA 58

Query: 54 KEDEGQVKKEIFIIKHRKSHDERERNCKIPPYSP 87
           +DEG+VKKEI IIKHRKSHDERE+       SP
Sbjct: 59 PQDEGEVKKEILIIKHRKSHDEREKTATSKTPSP 92


>Glyma02g40570.1 
          Length = 470

 Score =  133 bits (335), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 107/257 (41%), Positives = 120/257 (46%), Gaps = 64/257 (24%)

Query: 285 PGKLVSVPATVSSLVMEKSNNGSGGGEIKRVA-VKRNXXXXXXXXXXXXXXXXXXXXXXX 343
           PGK+VSVPATVSSLVM+KSN+  G    K++  VKRN                       
Sbjct: 237 PGKMVSVPATVSSLVMDKSNSCGGDSGTKKITTVKRNVGDAGSKGAASP----------- 285

Query: 344 NGRSQSPARANGIAANGKVLGENXXXXXXXXXPSLSRNNSARKAEHSPYRRNPLSEVDPN 403
             R+QSPAR                       PSLSRNNS+RK E SPYRRNP SEVD N
Sbjct: 286 --RAQSPAR-----------------QQHQQQPSLSRNNSSRKVEQSPYRRNPQSEVDHN 326

Query: 404 SLAYPQSN--TNGKVQNKPKKEIEPEANQKSNIDMNDNTRNRTSNRVALEKGVGGNCKAK 461
           S    + +  +N K+    K    P   QK N             RVALEKGV  NCK K
Sbjct: 327 SSRKAEQSPYSNSKLMTLLKMIFFPFPLQKPN------------GRVALEKGVSVNCKTK 374

Query: 462 EHHQEEEIKVLPDNAVVKTVIVPSGVDNHKPQTLTXXXXXXXXXXDLDINPEALLNPPLT 521
           E H+EEE              VP  VDN KPQ LT          DLD N         +
Sbjct: 375 EQHEEEESS------------VPIRVDNLKPQGLT-RSRSSRRSRDLDTNATN------S 415

Query: 522 YTSLLLEDIHNFHQKNT 538
           Y SLLLEDI NFHQKNT
Sbjct: 416 YASLLLEDIQNFHQKNT 432



 Score =  114 bits (286), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 85/215 (39%), Positives = 102/215 (47%), Gaps = 45/215 (20%)

Query: 1   MGACLXXXXXXXXXXXXXTAPPQPKNSENVVTVTMSKPEV--VSPKNKKLDTEIAKEDEG 58
           MG CL              +  Q +NSEN V VT+SKP    +S KNK        +DE 
Sbjct: 1   MGTCLSKKNGSSTSPNKSVS--QHRNSENSVIVTLSKPTEPELSLKNK------TPQDE- 51

Query: 59  QVKKEIFIIKHRKSHDERERNC---KIPPYSPQKNLQAKSGDGLSSSEAESMGXXXXXXX 115
            VKKEIFIIK R SHD+RE+     K  P+  Q +   K GDG                 
Sbjct: 52  -VKKEIFIIKPRNSHDDREKTTTTSKTQPFIAQ-SPAPKQGDG----------------- 92

Query: 116 XXXXXXPSTPNMAVTGVRTSSCTKEEVDAILIQCXXXXXXXXXXXXXXXXXXXXXXXXXX 175
                 PSTP++ + GVRTSSCTKEEVD ILIQC                          
Sbjct: 93  ---TIAPSTPSIGIVGVRTSSCTKEEVDEILIQC--------GRLSRSSSGRKYSGSKRS 141

Query: 176 FDFDHCDNDAVSAEDETKRANGSDNS-EEYDAAAE 209
           FDFDHCDND  SAED+ +++ G+ N  EE D A E
Sbjct: 142 FDFDHCDNDTTSAEDDQRKSKGNGNGREENDVAGE 176