Miyakogusa Predicted Gene

Lj2g3v2449260.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2449260.3 Non Chatacterized Hit- tr|A9PF63|A9PF63_POPTR
Putative uncharacterized protein OS=Populus
trichocarp,47.3,1e-16,seg,NULL; B3 DNA binding domain,B3 DNA binding
domain; DNA-binding pseudobarrel domain,DNA-binding p,CUFF.38981.3
         (322 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g40400.1                                                       264   8e-71
Glyma06g04200.1                                                       130   2e-30
Glyma04g04030.1                                                       128   8e-30
Glyma17g20180.1                                                       125   9e-29
Glyma01g45640.1                                                       113   3e-25
Glyma06g04190.1                                                        74   2e-13
Glyma14g08640.1                                                        60   4e-09
Glyma17g36470.1                                                        59   1e-08
Glyma17g36490.1                                                        54   2e-07
Glyma14g08630.1                                                        51   2e-06

>Glyma02g40400.1 
          Length = 348

 Score =  264 bits (675), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 159/339 (46%), Positives = 195/339 (57%), Gaps = 81/339 (23%)

Query: 1   MNLQTSYPSFVKSMVRSHVYSCFWLGLPSRFCEEHLPKTLYDMILEDEDGSEYEAVYIGK 60
           +NL +S PSF+KSMVRSHVYSCFWLGLPS+FCEEHLPKTL+DM+LEDE+GSEYEAVYIG 
Sbjct: 72  INLNSSNPSFIKSMVRSHVYSCFWLGLPSKFCEEHLPKTLHDMVLEDENGSEYEAVYIGN 131

Query: 61  RSGLSGGWRAFALDHKLDDGDALVFELVEASRFKIYICRAFPXXXXXXXXXXXXXXXXXX 120
           R+GLSGGWRAFALDHKLDDGDALVFEL+EASRFKIYI RAFP                  
Sbjct: 132 RAGLSGGWRAFALDHKLDDGDALVFELIEASRFKIYIVRAFP------------------ 173

Query: 121 AKATXXXXXXXXXXXXXXXXXXXXXXIVHETKESANQNTLKEEGRTRASKRLKAAGXXXX 180
                                        ++ E    N L+EEG  RA+K  KAA     
Sbjct: 174 -----------------------------DSVEEKGNNILEEEGNVRATKAPKAACNLES 204

Query: 181 XXXNKVKKPKQAIMHETNESENSQDSLLESSIDNEVKPAXXXXXXXXXXXXXYT------ 234
               K KKPKQA ++ET ESE+SQ+ LL+SSIDNEVKP                      
Sbjct: 205 EC--KTKKPKQAAVYETKESESSQEYLLDSSIDNEVKPQGVNPTNKETKFSQKNTPKKSK 262

Query: 235 LPVTGESKGEAPIETMKPKEAVLYQQ---------SELGDSGKAEQLLLENEVVKPNPCK 285
            P T +SKG+  I+T KPK ++             +E+G S K E+    NE V      
Sbjct: 263 YPATADSKGKVQIKTEKPKASIKLSNNTRKSKEGINEIGGSDKLEK----NEFV------ 312

Query: 286 KKELQDAENELKKVEPIEQASK---RPRKQRAVKLFRKK 321
               QDA+++L+KVE +E+A K   +  ++ + K FRKK
Sbjct: 313 ----QDADSKLEKVELVEEARKCVTKKLEKTSSKFFRKK 347


>Glyma06g04200.1 
          Length = 232

 Score =  130 bits (326), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 53/100 (53%), Positives = 74/100 (74%)

Query: 2   NLQTSYPSFVKSMVRSHVYSCFWLGLPSRFCEEHLPKTLYDMILEDEDGSEYEAVYIGKR 61
            L++ YP+F+KSM++SHV   FWLGLP  FC+ +LPK    + L DEDG+EY  +Y+  +
Sbjct: 124 GLESEYPAFIKSMLQSHVSGGFWLGLPVHFCKSNLPKKDEVVTLIDEDGTEYSTIYLAGK 183

Query: 62  SGLSGGWRAFALDHKLDDGDALVFELVEASRFKIYICRAF 101
           +GLSGGWR FA+ H L DGDAL+F+L++ + FK+YI RA 
Sbjct: 184 TGLSGGWRGFAIAHDLADGDALIFQLIKRTTFKVYIVRAI 223


>Glyma04g04030.1 
          Length = 228

 Score =  128 bits (322), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 50/98 (51%), Positives = 75/98 (76%)

Query: 3   LQTSYPSFVKSMVRSHVYSCFWLGLPSRFCEEHLPKTLYDMILEDEDGSEYEAVYIGKRS 62
           L++ +P+F+KSM++SH+   FWLGLP  FC+ +LPK    M L DEDG+EY  +Y+ +++
Sbjct: 124 LESEHPAFIKSMLQSHISGGFWLGLPVHFCKSNLPKGDEVMTLIDEDGNEYPTIYLARKT 183

Query: 63  GLSGGWRAFALDHKLDDGDALVFELVEASRFKIYICRA 100
           GLSGGW+ FA+ H L DGDA++F+L++ + FK+YI RA
Sbjct: 184 GLSGGWKGFAVGHDLADGDAVIFQLIKHTAFKVYIIRA 221


>Glyma17g20180.1 
          Length = 218

 Score =  125 bits (313), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 54/93 (58%), Positives = 67/93 (72%)

Query: 2   NLQTSYPSFVKSMVRSHVYSCFWLGLPSRFCEEHLPKTLYDMILEDEDGSEYEAVYIGKR 61
           NL+  +PSFVKS+VRSHV SCFW+GLP  FC+ HLP      ILEDE G EY   YI  +
Sbjct: 54  NLEREFPSFVKSLVRSHVASCFWMGLPVSFCKRHLPDKDTTFILEDESGKEYMTKYIACK 113

Query: 62  SGLSGGWRAFALDHKLDDGDALVFELVEASRFK 94
           +GLS GWR F+  HKL +GD +VF+LVE ++FK
Sbjct: 114 TGLSAGWRQFSAVHKLHEGDVVVFQLVEPTKFK 146


>Glyma01g45640.1 
          Length = 181

 Score =  113 bits (283), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 47/99 (47%), Positives = 68/99 (68%)

Query: 2   NLQTSYPSFVKSMVRSHVYSCFWLGLPSRFCEEHLPKTLYDMILEDEDGSEYEAVYIGKR 61
           NL   +P+F+KSM+ SHV   FWLGLP +FC  ++PK    + LEDE G  YE  Y+ ++
Sbjct: 52  NLSPQFPTFLKSMLPSHVAGGFWLGLPKKFCNLYMPKLDTTIALEDETGQLYETKYLAQK 111

Query: 62  SGLSGGWRAFALDHKLDDGDALVFELVEASRFKIYICRA 100
           +GLS GWR F++ H L + D L+F LV+ S+F++YI R+
Sbjct: 112 AGLSAGWRGFSIAHNLLEMDVLIFHLVQPSKFRVYIIRS 150


>Glyma06g04190.1 
          Length = 971

 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 33/72 (45%), Positives = 45/72 (62%)

Query: 26  GLPSRFCEEHLPKTLYDMILEDEDGSEYEAVYIGKRSGLSGGWRAFALDHKLDDGDALVF 85
           GLP  FC+ +LPK    M L DEDG+EY  +Y+ +++GL GGW+ FA+ H L D DA  F
Sbjct: 816 GLPVHFCKSNLPKEDEVMTLIDEDGNEYPTIYLARKTGLRGGWKGFAVAHDLADRDAFSF 875

Query: 86  ELVEASRFKIYI 97
            L+    F + I
Sbjct: 876 LLLPTDSFCLNI 887


>Glyma14g08640.1 
          Length = 342

 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 5/100 (5%)

Query: 3   LQTSYPSFVKSMVRSHVYSCFWLGLPSRFCEEHLPKTLYDMILEDEDGSEYEAVYIGKRS 62
             + +PSFVK M + +V   + L +P +F   HLP    ++ L +  G  +    +    
Sbjct: 215 FSSPFPSFVKIMKKFNVSGSYTLKIPYQFSAAHLPTYKTEVTLRNSRGGCWTVNSVPDAK 274

Query: 63  G-----LSGGWRAFALDHKLDDGDALVFELVEASRFKIYI 97
           G       GGW AF  D+ ++ GD  +FELV     ++YI
Sbjct: 275 GRTVHTFCGGWMAFVRDNDINFGDTCIFELVAQCEMQVYI 314


>Glyma17g36470.1 
          Length = 369

 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 5/96 (5%)

Query: 7   YPSFVKSMVRSHVYSCFWLGLPSRFCEEHLPKTLYDMILEDEDGSEYEAVYIGKRSG--- 63
           +PSFVK M + +V   + L +P +F   HLP    ++ L +  G  +    +    G   
Sbjct: 246 FPSFVKIMKKFNVSGSYTLKIPYQFSAAHLPTYKTEVTLRNSRGECWTVNSVPDAKGRTV 305

Query: 64  --LSGGWRAFALDHKLDDGDALVFELVEASRFKIYI 97
               GGW AF  D+ ++ GD  +FELV      +YI
Sbjct: 306 HTFCGGWMAFVRDNDINFGDTCIFELVAQCEMHVYI 341


>Glyma17g36490.1 
          Length = 407

 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 3/76 (3%)

Query: 14  MVRSHVYSCFWLGLPSRFCEEHLPKTLYDMILEDEDG---SEYEAVYIGKRSGLSGGWRA 70
           M  SHVY  F++ +   +  +H+  +  D+IL    G   + Y    I    GL+GGW+ 
Sbjct: 280 MKPSHVYKRFFVSMRGTWIGKHISPSSQDVILRMGKGEWIARYSYNNIRNNGGLTGGWKH 339

Query: 71  FALDHKLDDGDALVFE 86
           F+LD+ L++GDA VF+
Sbjct: 340 FSLDNNLEEGDACVFK 355


>Glyma14g08630.1 
          Length = 410

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 3/76 (3%)

Query: 14  MVRSHVYSCFWLGLPSRFCEEHLPKTLYDMILEDEDG---SEYEAVYIGKRSGLSGGWRA 70
           M  +HVY  F++ +   +  +H+  +  D+IL    G   + Y    I    GL+GGW+ 
Sbjct: 275 MKPTHVYKRFFVSIRGTWIGKHISPSSQDVILRMGKGEWIARYSYNNIRNNGGLTGGWKH 334

Query: 71  FALDHKLDDGDALVFE 86
           F+LD  L++GDA VF+
Sbjct: 335 FSLDSNLEEGDACVFK 350