Miyakogusa Predicted Gene

Lj2g3v2414570.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2414570.1 Non Chatacterized Hit- tr|C5YVU5|C5YVU5_SORBI
Putative uncharacterized protein Sb09g013380 OS=Sorghu,48.57,5e-19,
,CUFF.38933.1
         (207 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g40180.1                                                       238   3e-63
Glyma14g38370.1                                                       139   2e-33
Glyma05g24690.1                                                        89   3e-18
Glyma18g06100.1                                                        88   6e-18

>Glyma02g40180.1 
          Length = 185

 Score =  238 bits (607), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 140/184 (76%), Positives = 147/184 (79%), Gaps = 9/184 (4%)

Query: 1   MKVKALGVFKSKIFKPCKKILHFFRFKPKKPVLIRALKSRSHKSKFQKP-------MSSL 53
           MK KALGVFKSK+ KPCKK+L FFR KPKK + IRALK R+HKS F K        MSSL
Sbjct: 1   MKGKALGVFKSKLLKPCKKLLLFFRLKPKKYLFIRALKFRAHKSTFPKAFPRKPTIMSSL 60

Query: 54  L-SVFRSPKKSKDLGMLQGLKSPSNMLETPLFPSPLTPAFVKASGGTEKREGSSQEVEDA 112
           L SVFRSPKKSK    LQGLKSPSN+ ETP FPSPLTPA V A G  EK E S QEVEDA
Sbjct: 61  LQSVFRSPKKSKHADTLQGLKSPSNVHETPFFPSPLTPACVMAHGA-EKMEASRQEVEDA 119

Query: 113 CRSFENYLVEMIVEEGKTRDLMDVEEFLYCWKNLKCPVFIDLVCRFYGELCKDLFSTDSE 172
           CRSFENYLVEMIVEEGKTRDLMDVEE LYCWKNL+CPVFIDLV RFYGELCKDLFS DSE
Sbjct: 120 CRSFENYLVEMIVEEGKTRDLMDVEELLYCWKNLRCPVFIDLVSRFYGELCKDLFSPDSE 179

Query: 173 ESEG 176
           E + 
Sbjct: 180 EGDS 183


>Glyma14g38370.1 
          Length = 115

 Score =  139 bits (350), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 68/86 (79%), Positives = 71/86 (82%), Gaps = 4/86 (4%)

Query: 90  PAFVKASGGTEKREGSSQEVEDACRSFENYLVEMIVEEGKTRDLMDVEEFLYCWKNLKCP 149
           P F++A     K     QEVEDACRSFENYLVEMIVEEGKTRDLMDVEE LYCWKNLKCP
Sbjct: 31  PVFIRAL----KFRAHKQEVEDACRSFENYLVEMIVEEGKTRDLMDVEELLYCWKNLKCP 86

Query: 150 VFIDLVCRFYGELCKDLFSTDSEESE 175
           VFIDLV RFYGELCKDLFS DSEE +
Sbjct: 87  VFIDLVSRFYGELCKDLFSPDSEEGD 112



 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 4/88 (4%)

Query: 1  MKVKALGVFKSKIFKPCKKILHFFRFKPKKPVLIRALKSRSHKSKFQKPMSS----LLSV 56
          MK KALGVFKSK+ +PCKK+  FFR + KKPV IRALK R+HK + +    S    L+ +
Sbjct: 1  MKGKALGVFKSKLLRPCKKLFLFFRLRSKKPVFIRALKFRAHKQEVEDACRSFENYLVEM 60

Query: 57 FRSPKKSKDLGMLQGLKSPSNMLETPLF 84
               K++DL  ++ L      L+ P+F
Sbjct: 61 IVEEGKTRDLMDVEELLYCWKNLKCPVF 88


>Glyma05g24690.1 
          Length = 112

 Score = 89.4 bits (220), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 48/83 (57%), Positives = 55/83 (66%), Gaps = 13/83 (15%)

Query: 98  GTEKREGSSQEVEDACRSFENYLVEMIVEEGKTRDLMDVEEFLYCWKNLKCPVFIDLVCR 157
             +KRE S Q VEDAC+ FENYLVEM+VEEGK RDL+ VEE L+CWKNLKCPVF      
Sbjct: 42  SVDKREASLQ-VEDACKKFENYLVEMVVEEGKMRDLLYVEELLHCWKNLKCPVF------ 94

Query: 158 FYGELCKDLFSTDSEESEGLRTR 180
                 K LFS+ SEE   + T 
Sbjct: 95  ------KYLFSSYSEEGSSIPTN 111


>Glyma18g06100.1 
          Length = 134

 Score = 87.8 bits (216), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 70/150 (46%), Positives = 86/150 (57%), Gaps = 28/150 (18%)

Query: 1   MKVKALGVFKSKIFKPCKKILHFFRFKPKKPVLIRALKSRSHKSKFQKPMSSLLSVFRSP 60
           M+VKA GVF+SK+FKPCKK  H+                    S+F    SSL+      
Sbjct: 1   MRVKAQGVFRSKLFKPCKK--HYCCL-----------------SQFITYKSSLILC---S 38

Query: 61  KKSKDLGMLQGLKSP----SNMLETPLFPSPLTPAFVKASGGTEKREGSSQEVEDACRSF 116
           ++SKD   L  LK+P       L  P + SPL PA+ +A    +KRE S Q VE+ C+  
Sbjct: 39  QRSKDKDRLPDLKNPLYIEHETLPFPSYNSPLAPAYARACC-VDKREASLQ-VEETCKKI 96

Query: 117 ENYLVEMIVEEGKTRDLMDVEEFLYCWKNL 146
           ENYLVEMIVEEGK RDLMD+EE L CWKNL
Sbjct: 97  ENYLVEMIVEEGKMRDLMDLEELLLCWKNL 126