Miyakogusa Predicted Gene

Lj2g3v2413520.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2413520.1 Non Chatacterized Hit- tr|I3T4L6|I3T4L6_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=4
SV,60.47,1e-18,seg,NULL,CUFF.38941.1
         (98 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g06160.2                                                       100   4e-22
Glyma18g06160.1                                                       100   4e-22
Glyma11g30080.1                                                       100   4e-22
Glyma14g38330.1                                                        89   9e-19

>Glyma18g06160.2 
          Length = 89

 Score =  100 bits (249), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 53/92 (57%), Positives = 58/92 (63%), Gaps = 3/92 (3%)

Query: 1  MCPLRFILIFLSATLAGFFVLRNLRSQPHPTDLDQXXXXXXXXXXXXXXXXXXXXXXXXV 60
          MCPLR ILIFLSATLAGFFVLRNLRSQP    +++                        V
Sbjct: 1  MCPLRLILIFLSATLAGFFVLRNLRSQPQ---IEEDDAVVPPNPKISDSSDASSNGTSKV 57

Query: 61 RVALESGFWTLVDMASGRYLWRQLVPSSSKRS 92
          R  +ESGFWT VDMASGRYLWR LV +SSKRS
Sbjct: 58 RAVVESGFWTFVDMASGRYLWRHLVSNSSKRS 89


>Glyma18g06160.1 
          Length = 89

 Score =  100 bits (249), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 53/92 (57%), Positives = 58/92 (63%), Gaps = 3/92 (3%)

Query: 1  MCPLRFILIFLSATLAGFFVLRNLRSQPHPTDLDQXXXXXXXXXXXXXXXXXXXXXXXXV 60
          MCPLR ILIFLSATLAGFFVLRNLRSQP    +++                        V
Sbjct: 1  MCPLRLILIFLSATLAGFFVLRNLRSQPQ---IEEDDAVVPPNPKISDSSDASSNGTSKV 57

Query: 61 RVALESGFWTLVDMASGRYLWRQLVPSSSKRS 92
          R  +ESGFWT VDMASGRYLWR LV +SSKRS
Sbjct: 58 RAVVESGFWTFVDMASGRYLWRHLVSNSSKRS 89


>Glyma11g30080.1 
          Length = 89

 Score =  100 bits (249), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 53/92 (57%), Positives = 59/92 (64%), Gaps = 3/92 (3%)

Query: 1  MCPLRFILIFLSATLAGFFVLRNLRSQPHPTDLDQXXXXXXXXXXXXXXXXXXXXXXXXV 60
          MCPLRFILIFLSATLAGFFVLRNLRSQP    +++                        +
Sbjct: 1  MCPLRFILIFLSATLAGFFVLRNLRSQPQ---IEEGDAVVPPNPKISDSSDASSNVTSKL 57

Query: 61 RVALESGFWTLVDMASGRYLWRQLVPSSSKRS 92
          R  +ESGFWT VDMASGRYLWR LV +SSKRS
Sbjct: 58 RAVVESGFWTFVDMASGRYLWRHLVCNSSKRS 89


>Glyma14g38330.1 
          Length = 97

 Score = 89.4 bits (220), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 52/95 (54%), Positives = 56/95 (58%), Gaps = 4/95 (4%)

Query: 1  MCPLRFILIFLSATLAGFFVLRNLRSQP-HPTDL---DQXXXXXXXXXXXXXXXXXXXXX 56
          MCPLRFILIFLSATLAGF VLRNL  QP H TD    D                      
Sbjct: 1  MCPLRFILIFLSATLAGFLVLRNLGWQPDHITDTELEDANNEDDHTTLTSDAASPSLNNA 60

Query: 57 XXXVRVALESGFWTLVDMASGRYLWRQLVPSSSKR 91
             V+ AL SGFW L+DMASGRYLW+QLV SSS +
Sbjct: 61 TSMVQGALLSGFWNLLDMASGRYLWKQLVSSSSPK 95