Miyakogusa Predicted Gene

Lj2g3v2379070.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2379070.1 tr|J3SFI5|J3SFI5_CROAD tRNA pseudouridine
synthase OS=Crotalus adamanteus PE=2 SV=1,31.35,2e-18,Pseudouridine
synthase,Pseudouridine synthase, catalytic domain; no
description,Pseudouridine syntha,CUFF.38916.1
         (498 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma0448s00210.1                                                     670   0.0  
Glyma02g39970.1                                                       652   0.0  
Glyma02g39980.1                                                       522   e-148
Glyma02g36350.1                                                        81   3e-15
Glyma19g02100.1                                                        79   1e-14

>Glyma0448s00210.1 
          Length = 499

 Score =  670 bits (1729), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/447 (72%), Positives = 363/447 (81%), Gaps = 13/447 (2%)

Query: 52  DKWEPFLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLD 111
           +KWEPFLKK VVMRVGYVGT++RGLQ+QRDEHRLSTIEKELETAI+ AGG+RDSNFGDL+
Sbjct: 66  EKWEPFLKKKVVMRVGYVGTNFRGLQMQRDEHRLSTIEKELETAIFMAGGMRDSNFGDLN 125

Query: 112 KVKWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILP 171
           KVKWGRSSRTDKGVHSLAT+I+FKMEIPE+AWK D  G+ LANRIN YLPNTIR+F ILP
Sbjct: 126 KVKWGRSSRTDKGVHSLATIIAFKMEIPENAWKGDDYGIALANRINSYLPNTIRIFSILP 185

Query: 172 SKKRFDPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYT 231
           S KRFDPRRECNLRKYSYLLPADIIGIQSHFS+DEIDFHI EFNS+L+ FEGEHPFHNYT
Sbjct: 186 STKRFDPRRECNLRKYSYLLPADIIGIQSHFSQDEIDFHILEFNSILNVFEGEHPFHNYT 245

Query: 232 VRSKYRKKHHARKSPGNGIMSNKTGXXXXXXXXXXXXXXXDVDDFVSTTLGDKDQXXXXX 291
           VRSKYRKK+  R+S GN  M ++ G                +     +   + D      
Sbjct: 246 VRSKYRKKYQVRQSSGNDGMPDRIG-------------SSSLASACESESEESDDDDDDD 292

Query: 292 XXXXXNDFSHQNSSLVVRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKDYVEIKI 351
                N FS QNS++VVRA+WLYEPDE DRLN SHFRK+ +CSCGKL+  LG DYVE+ +
Sbjct: 293 FSSESNGFSSQNSTVVVRAKWLYEPDETDRLNASHFRKVFRCSCGKLETSLGYDYVEVHV 352

Query: 352 WGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFSMR 411
           WGDSFMLHQIRKMVGTAVAVKRNLIPRD + LSL KF+RIV PLAPPEVLILRGN F MR
Sbjct: 353 WGDSFMLHQIRKMVGTAVAVKRNLIPRDAILLSLSKFSRIVFPLAPPEVLILRGNAFKMR 412

Query: 412 SSAGKFIRPEMVSLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYSSF 471
           +SAG F R EMVS+VESEPIL   +EFYTSV+LPE+SKFLDSS SPW +WVE LDKYSS 
Sbjct: 413 ASAGNFTRQEMVSMVESEPILKAADEFYTSVVLPEVSKFLDSSSSPWAKWVENLDKYSSI 472

Query: 472 ADAELDEVRMAWRTWKENFRAKSASDA 498
            D ELDEVR AW+TWKENFR KS S+A
Sbjct: 473 PDVELDEVRKAWKTWKENFRVKSESEA 499


>Glyma02g39970.1 
          Length = 494

 Score =  652 bits (1683), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 317/440 (72%), Positives = 350/440 (79%), Gaps = 43/440 (9%)

Query: 52  DKWEPFLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLD 111
           +KWEPFLKK VVMRVGYVGTD+RGLQ+QRDEHRLST+EKELETAI+ AGG+RDSNFGDL+
Sbjct: 67  EKWEPFLKKKVVMRVGYVGTDFRGLQMQRDEHRLSTVEKELETAIFTAGGMRDSNFGDLN 126

Query: 112 KVKWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILP 171
           KVKWGRSSRTDKGVHSLATMI+FKMEIPE+AWK D  G+VLANRIN YLPNTIRVF ILP
Sbjct: 127 KVKWGRSSRTDKGVHSLATMIAFKMEIPENAWKGDDYGIVLANRINSYLPNTIRVFSILP 186

Query: 172 SKKRFDPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYT 231
           S KRFDPRRECNLRKYSYLLPA IIGIQSHFS+DEIDFHISEFNS+L+ FEGEHPFHNYT
Sbjct: 187 STKRFDPRRECNLRKYSYLLPAGIIGIQSHFSQDEIDFHISEFNSILNVFEGEHPFHNYT 246

Query: 232 VRSKYRKKHHARKSPGNGIMSNKTGXXXXXXXXXXXXXXXDVDDFVSTTLGDKDQXXXXX 291
           VRSKYRKK+                                           +++     
Sbjct: 247 VRSKYRKKY-------------------------------------------QEESHKPP 263

Query: 292 XXXXXNDFSHQNSSLVVRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKDYVEIKI 351
                N  S QNSS+VVRA+WLYEPDE DRLN SHFRK+ +CSCGKL+  LG DY+E+ I
Sbjct: 264 ESSESNGLSSQNSSVVVRAKWLYEPDETDRLNASHFRKVFRCSCGKLETSLGYDYIEVHI 323

Query: 352 WGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFSMR 411
           WGDSFMLHQIRKMVGTAVAVKRNLIPRD + LSL KF+RIVLPLAPPEVLILRGN F MR
Sbjct: 324 WGDSFMLHQIRKMVGTAVAVKRNLIPRDAILLSLSKFSRIVLPLAPPEVLILRGNAFKMR 383

Query: 412 SSAGKFIRPEMVSLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYSSF 471
           +SAG F R EMVS+VESE IL  V+EFYTSV+LPE+SKFLDSS SPW +WVE LDKYSS 
Sbjct: 384 ASAGNFTRQEMVSMVESEQILEAVDEFYTSVVLPEVSKFLDSSNSPWAKWVENLDKYSSI 443

Query: 472 ADAELDEVRMAWRTWKENFR 491
            DAELDEVR AW+TWKENFR
Sbjct: 444 PDAELDEVRKAWKTWKENFR 463


>Glyma02g39980.1 
          Length = 425

 Score =  522 bits (1344), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 258/431 (59%), Positives = 316/431 (73%), Gaps = 15/431 (3%)

Query: 64  MRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRSSRTDK 123
           M V YVGT+YRGLQ+Q DEH LSTIEKELETAI+KAGGIR+SNFGDL K+ W RSSRTDK
Sbjct: 1   MLVAYVGTNYRGLQMQHDEHSLSTIEKELETAIFKAGGIRESNFGDLQKIGWARSSRTDK 60

Query: 124 GVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDPRRECN 183
           GVHSLAT+ISFKMEIPE+AW  D  G  LAN +N YLP  I+V  ILPS++ FDPR+EC 
Sbjct: 61  GVHSLATIISFKMEIPENAWNGDPYGFGLANYVNSYLPFDIKVISILPSQRSFDPRKECI 120

Query: 184 LRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYTVRSKYRKKHHAR 243
           LRKYSYLLPA+IIGIQSHFS DE+D+HISEFN +L+ FEG HPFHNYT RSKYRK+   R
Sbjct: 121 LRKYSYLLPAEIIGIQSHFS-DEVDYHISEFNDILNVFEGIHPFHNYTARSKYRKQFPNR 179

Query: 244 KSPG-NGIMSNKTGXXXXXXXXXXXXXXXDVDDFVSTTLGDKDQXXXXXXXXXXNDFSHQ 302
           +S   +G  + ++                + D+  +  +               N    Q
Sbjct: 180 QSSSKSGTSARESLSYESECEYSDGEENSETDEAYTENING-------------NGLHDQ 226

Query: 303 NSSLVVRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIR 362
           +S LV RARWLYEPDEADRL+ SHFRK+ QCSCGKL+  LG +Y+EI I G+SFMLHQIR
Sbjct: 227 DSRLVARARWLYEPDEADRLSASHFRKVFQCSCGKLETSLGYNYIEISIQGESFMLHQIR 286

Query: 363 KMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFSMRSSAGKFIRPEM 422
           KMVGTAVAVKR  +P+DI+ LSL +F+RI+LPLAP E LILRGN FS+R+  G   RPEM
Sbjct: 287 KMVGTAVAVKRKALPKDIIKLSLTRFSRIILPLAPSEALILRGNRFSIRTRPGNITRPEM 346

Query: 423 VSLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYSSFADAELDEVRMA 482
            ++V+SE I   V++FYTSVMLP++SK LD S+SPW EW+E+LD ++S  + +LDEVR A
Sbjct: 347 QTIVKSEEIKKAVDDFYTSVMLPQVSKLLDPSRSPWDEWIEKLDAHTSIPNDQLDEVRKA 406

Query: 483 WRTWKENFRAK 493
           W    + F +K
Sbjct: 407 WNFEGKKFFSK 417


>Glyma02g36350.1 
          Length = 548

 Score = 80.9 bits (198), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 81/166 (48%), Gaps = 12/166 (7%)

Query: 57  FLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWG 116
           + ++ V +   Y G  Y+G+Q         TIE +LE A+Y +G + + + G   +  W 
Sbjct: 47  YKRRKVAIFFAYCGVGYQGMQKNPG---AKTIEGDLEEALYVSGAVPEQDRGVPKRYDWA 103

Query: 117 RSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRF 176
           RS+RTDKGV ++  ++S +  I         D   L +R+N  LP+ IR+FG       F
Sbjct: 104 RSARTDKGVSAVGQVVSGRFYI---------DPPGLVDRLNSNLPSQIRIFGYKRVTASF 154

Query: 177 DPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAFE 222
           + ++ C+ R+Y YL+P   +    H   + +   +   N L+   E
Sbjct: 155 NAKKFCDRRRYVYLIPVFALDPSCHRDRETVMASLGSGNELVKCLE 200



 Score = 59.3 bits (142), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 39/61 (63%)

Query: 343 GKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLI 402
           G ++V+ ++ G SFMLHQIRKM+G AVA+ RN  P  ++  +L +   I +P AP   L 
Sbjct: 367 GVEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIDEALQQDVNINVPTAPEVGLY 426

Query: 403 L 403
           L
Sbjct: 427 L 427


>Glyma19g02100.1 
          Length = 341

 Score = 79.0 bits (193), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 12/166 (7%)

Query: 57  FLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWG 116
           + ++ V +   Y G  Y+G+Q         TIE +LE  +Y +G + + + G   +  W 
Sbjct: 21  YKRRKVAIFFAYCGVGYQGMQKNPG---AKTIEGDLEEVLYVSGAVPEQDRGVPKRYDWA 77

Query: 117 RSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRF 176
           RS+RTDKGV ++  ++S +  I         D   L +R+N  LP+ IR+FG       F
Sbjct: 78  RSARTDKGVSAVGQVVSGRFYI---------DPPGLVDRLNSNLPSQIRIFGYKRVTASF 128

Query: 177 DPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAFE 222
           + ++ C+ R+Y YL+P   +    H   + +   +   N L+   E
Sbjct: 129 NAKKFCDRRRYVYLIPVFALDPSCHRDRETVMASLGSGNELVKCLE 174