Miyakogusa Predicted Gene

Lj2g3v2365920.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2365920.1 Non Chatacterized Hit- tr|G7KFJ0|G7KFJ0_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,57.83,1e-18,
,gene.g43306.t1.1
         (87 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g39920.1                                                       108   2e-24
Glyma14g38060.1                                                       105   1e-23

>Glyma02g39920.1 
          Length = 197

 Score =  108 bits (269), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 60/85 (70%), Positives = 65/85 (76%), Gaps = 5/85 (5%)

Query: 1  MELETSESSYPGSGSLHIPIDLFGSKKHAGAPRGVLAFADALGNILFTVNRHPPNRNYK- 59
          MEL TSE SYPGSG+  IPIDLFGSKKHAG  RGVLAF D  GNI+F VNRHPPN N   
Sbjct: 1  MELATSELSYPGSGNWEIPIDLFGSKKHAGVSRGVLAFTDESGNIVFRVNRHPPNPNSLP 60

Query: 60 ----KKLLLDASGNIIFSIYRHESG 80
              KKLLLDASGN +FSIYR+ +G
Sbjct: 61 LPKDKKLLLDASGNTLFSIYRYHNG 85


>Glyma14g38060.1 
          Length = 197

 Score =  105 bits (262), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 59/85 (69%), Positives = 64/85 (75%), Gaps = 5/85 (5%)

Query: 1  MELETSESSYPGSGSLHIPIDLFGSKKHAGAPRGVLAFADALGNILFTVNRHPPNRNYK- 59
          ME  TSES YPGSG+  IPIDLFGSKKHAG  RGVLAF D  GNI+F VNRHPPN N   
Sbjct: 1  MESATSESPYPGSGNWEIPIDLFGSKKHAGVSRGVLAFTDESGNIVFRVNRHPPNPNSSP 60

Query: 60 ----KKLLLDASGNIIFSIYRHESG 80
              KKLLLDASGN +FSIYR+ +G
Sbjct: 61 LPKDKKLLLDASGNTLFSIYRYHNG 85