Miyakogusa Predicted Gene

Lj2g3v2365720.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2365720.1 tr|G7K5S4|G7K5S4_MEDTR Cation proton exchanger
OS=Medicago truncatula GN=MTR_5g074320 PE=4 SV=1,66,0.0000000005,
,CUFF.38881.1
         (56 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g39010.1                                                        53   7e-08
Glyma09g23970.1                                                        47   3e-06
Glyma05g32580.1                                                        47   3e-06
Glyma14g38000.1                                                        46   7e-06
Glyma14g37990.1                                                        46   9e-06

>Glyma04g39010.1 
          Length = 799

 Score = 53.1 bits (126), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 23/43 (53%), Positives = 30/43 (69%)

Query: 12  HTEENTPSILNLLEISNPTRETPICFYVLHLNLLIVRSGPLFI 54
           HT  N P+++NLLE SNPT+ +PIC YVLHL  L  R+  + I
Sbjct: 463 HTPRNVPTMINLLEASNPTKNSPICVYVLHLVELSGRTSAMLI 505


>Glyma09g23970.1 
          Length = 681

 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 29/43 (67%)

Query: 12  HTEENTPSILNLLEISNPTRETPICFYVLHLNLLIVRSGPLFI 54
           H  +N P  +NLLE + PT+E P+C YVL L  LI R+ PLF+
Sbjct: 376 HRPDNIPPTINLLEATFPTKEDPVCAYVLQLIELIGRASPLFV 418


>Glyma05g32580.1 
          Length = 815

 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 20/43 (46%), Positives = 29/43 (67%)

Query: 12  HTEENTPSILNLLEISNPTRETPICFYVLHLNLLIVRSGPLFI 54
           H+  N P+++NLL+ SNPT+ +PIC YVLHL  L   +  L +
Sbjct: 451 HSPRNVPTMINLLDASNPTKNSPICIYVLHLTELAGHASALLV 493


>Glyma14g38000.1 
          Length = 721

 Score = 46.2 bits (108), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 24/44 (54%), Positives = 31/44 (70%)

Query: 12  HTEENTPSILNLLEISNPTRETPICFYVLHLNLLIVRSGPLFID 55
           H+EENT  ++N LE+SN T E PI F+VLHL  L  R+ P+ ID
Sbjct: 394 HSEENTLPMMNFLEMSNSTNENPIYFHVLHLLELKGRTIPVLID 437


>Glyma14g37990.1 
          Length = 686

 Score = 45.8 bits (107), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 3/55 (5%)

Query: 4   SHSMYPLF---HTEENTPSILNLLEISNPTRETPICFYVLHLNLLIVRSGPLFID 55
           S+++ PL    H EE+T  ++N LE+S+ T E PICF+VLHL  L  R+ P+ ID
Sbjct: 342 SNAVLPLMACIHYEEDTLPMINCLEMSHSTIENPICFHVLHLVELTGRTIPVLID 396