Miyakogusa Predicted Gene

Lj2g3v2338400.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2338400.1 Non Chatacterized Hit- tr|C5YQ27|C5YQ27_SORBI
Putative uncharacterized protein Sb08g000570
OS=Sorghu,41.38,1e-18,seg,NULL,CUFF.38861.1
         (241 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g06540.1                                                       235   3e-62

>Glyma18g06540.1 
          Length = 172

 Score =  235 bits (600), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 121/165 (73%), Positives = 132/165 (80%)

Query: 18  FGNATLQFLESLLLSKDVTSSIEVXXXXXXXXXXXXXXVIRSIAAKTLHEKLLVLEFFVR 77
           F ++TL+FLESLL+SKDV S IEV              VIRSIAAKT+H+KLLVL+FFVR
Sbjct: 1   FCDSTLRFLESLLVSKDVKSLIEVRSSLTHLLRSESLSVIRSIAAKTVHDKLLVLDFFVR 60

Query: 78  AFALVGDLQSCLALRYEGLVLREIKSASCQWLQVSPVEWLHFVEDAVHNGFHAVAEKACE 137
           AF+LVGD QSCLALRYE LV+RE KSASCQWLQVSP EWL FVE+AVHNGFHAVAEKACE
Sbjct: 61  AFSLVGDQQSCLALRYEALVMREHKSASCQWLQVSPAEWLSFVENAVHNGFHAVAEKACE 120

Query: 138 NALSCLANNDVQKTRSDADSENLKDVVSEITRLRNCAMASVASRS 182
            ALSCL NND  K   D   ENLK V+SEITRLRNCAMASVASRS
Sbjct: 121 IALSCLGNNDDLKHGRDPVPENLKAVISEITRLRNCAMASVASRS 165