Miyakogusa Predicted Gene

Lj2g3v2279590.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2279590.1 Non Chatacterized Hit- tr|K4CQ49|K4CQ49_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,71.67,1e-16,CXXU_selWTH: selT/selW/selH selenoprotein
domain,Selenoprotein, Rdx type; Rdx,Selenoprotein, Rdx
typ,CUFF.38791.1
         (225 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g37390.1                                                       277   5e-75
Glyma02g39270.1                                                       264   6e-71
Glyma03g07550.1                                                       240   8e-64

>Glyma14g37390.1 
          Length = 287

 Score =  277 bits (709), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 144/177 (81%), Positives = 155/177 (87%)

Query: 47  PATIQFPSEKTATNIGGVGLGNTVNINYCSSCSYKGTAVTMKNMLEIAFPGTEVVLANYP 106
           P TI FP EK   NI   GLGNTV+IN+CSSCSYKGTAVTMKNMLEIAFPGTEV+LANYP
Sbjct: 109 PVTIDFPPEKPTNNIATPGLGNTVHINFCSSCSYKGTAVTMKNMLEIAFPGTEVILANYP 168

Query: 107 APLPKRLLSKVVPVVQLGVIGTVVAGEQIFPMMGFVAPPPWYFNLRANKFGTIATTWLLG 166
             LPKRLLSK+VPVVQ+GVIG VVAGE IFPM+GFVAPPPWY+NLRAN+FGTIA+TWLLG
Sbjct: 169 PTLPKRLLSKLVPVVQIGVIGVVVAGEHIFPMLGFVAPPPWYYNLRANRFGTIASTWLLG 228

Query: 167 NTLQSFLQSSGAFEVYLNGELVFSKLKEARFPGEIELKDLISKKMETSRLVHSASEL 223
           N LQSFLQSSGAFEVY NGELVFSKLKE RFPGEIELKDLI+KKM  S  V+  SEL
Sbjct: 229 NALQSFLQSSGAFEVYFNGELVFSKLKEGRFPGEIELKDLITKKMTNSIRVNGVSEL 285


>Glyma02g39270.1 
          Length = 267

 Score =  264 bits (674), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 141/177 (79%), Positives = 155/177 (87%)

Query: 47  PATIQFPSEKTATNIGGVGLGNTVNINYCSSCSYKGTAVTMKNMLEIAFPGTEVVLANYP 106
           P  I+FP EK  +NI   GLGNTV IN+CSSCSYKGTAVTMKNMLEIA PGTEV+LANYP
Sbjct: 89  PVIIEFPPEKPISNIATPGLGNTVYINFCSSCSYKGTAVTMKNMLEIALPGTEVILANYP 148

Query: 107 APLPKRLLSKVVPVVQLGVIGTVVAGEQIFPMMGFVAPPPWYFNLRANKFGTIATTWLLG 166
             LPKRLLSK+VPVVQ+GV+G VVAGE IFPM+GFVAPPPWY+NLRAN+FGTIA+TWLLG
Sbjct: 149 PSLPKRLLSKLVPVVQIGVVGVVVAGEHIFPMLGFVAPPPWYYNLRANRFGTIASTWLLG 208

Query: 167 NTLQSFLQSSGAFEVYLNGELVFSKLKEARFPGEIELKDLISKKMETSRLVHSASEL 223
           N LQSFLQSSGAFE+Y NGELVFSKLKE RFPGEIELKDLI+KKM  S  V+S SEL
Sbjct: 209 NALQSFLQSSGAFEIYFNGELVFSKLKEGRFPGEIELKDLITKKMTNSIGVNSVSEL 265


>Glyma03g07550.1 
          Length = 285

 Score =  240 bits (613), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 112/168 (66%), Positives = 142/168 (84%), Gaps = 2/168 (1%)

Query: 50  IQFPSEKTATNIGGVGLGNTVNINYCSSCSYKGTAVTMKNMLEIAFPGTEVVLANYPAPL 109
           ++FP++K  + IG +G+GNTV+I++C+SCSYKG AVT+KNMLE  FPG  VVLANYP PL
Sbjct: 111 LEFPTQK-QSGIGLIGIGNTVSIDFCTSCSYKGNAVTVKNMLESEFPGINVVLANYPPPL 169

Query: 110 PKRLLSKVVPVVQLGVIGTVVAGEQIFPMMGFVAPPPWYFNLRANKFGTIATTWLLGNTL 169
           PKR+L KVVPVVQ G+I  +VAG+QIFP +G + PPPWY++LRANKF +IA+TWLL N L
Sbjct: 170 PKRILGKVVPVVQTGIIVAIVAGDQIFPRLG-ITPPPWYYSLRANKFRSIASTWLLTNFL 228

Query: 170 QSFLQSSGAFEVYLNGELVFSKLKEARFPGEIELKDLISKKMETSRLV 217
           QSFLQSSGAFEVY NG+LVFSKLKE RFPGEIEL++L+ +++  +R V
Sbjct: 229 QSFLQSSGAFEVYCNGDLVFSKLKENRFPGEIELRELVGRRLANTRFV 276