Miyakogusa Predicted Gene

Lj2g3v2277510.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2277510.1 Non Chatacterized Hit- tr|F4KGA5|F4KGA5_ARATH
Uncharacterized protein OS=Arabidopsis thaliana
GN=At5,28.21,3e-16,seg,NULL; VARLMGL,NULL,CUFF.38783.1
         (390 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g37340.1                                                       326   2e-89
Glyma02g39220.1                                                       321   8e-88
Glyma11g27140.1                                                       181   2e-45
Glyma18g06960.1                                                       138   1e-32

>Glyma14g37340.1 
          Length = 395

 Score =  326 bits (836), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 204/378 (53%), Positives = 240/378 (63%), Gaps = 33/378 (8%)

Query: 30  CNSKS---GCLTSILHRILCSGALQTHPSDQIIELGSSMSVVSGKVQEFKAMQNTEAANS 86
           CNSKS   GCLT+IL RILCSG L THPSDQI EL  SMS +SGKVQE K  QNTE+  +
Sbjct: 28  CNSKSVTAGCLTAILRRILCSGGLPTHPSDQIREL-DSMSKMSGKVQELKTKQNTESTTT 86

Query: 87  TKISP--------GVVGRLMGLDSMGEVQKXXXXXXXXXXXXXX---XXXVDYLGECKRM 135
              S         G+V RLMGL+SM E                       +DYLGE KRM
Sbjct: 87  VTFSTTTTTTITRGIVERLMGLESMVERDTNTTNEATSSSSLPRSKSMNSMDYLGEYKRM 146

Query: 136 EGLHRRVKXXXXXXXXXEVPSFHLLENENFLVLSFESGCESKEFXXXXXXXXXXXXXXXX 195
           EGLH+R K         EVP+FHL ENENFLVLSFESGC+  EF                
Sbjct: 147 EGLHKRAKSSSFR----EVPTFHLHENENFLVLSFESGCDGGEFRSQKGIKKEKASKERT 202

Query: 196 VSGMSCVN---VGNGGEVQFATNMKHKEGANGEKVKKRKKGTAAFYNTEKKVESECSSED 252
           +  M+C     VG+  E +F+  +K KE  N EKVK++KKGT  +   E+KV++ECSSED
Sbjct: 203 LF-MACSEKEYVGSETE-RFSHPVKRKEVTNDEKVKRKKKGTTCY--AEEKVDTECSSED 258

Query: 253 ASPVSVFDFERDAPRTDVDIFGDDMNWRRKLSPELENDQHFILHSDGIFMNEERKINEIE 312
           +SPVS+FDFER AP T+VD FG D +WRRKLSPELEN+Q   L      M EE K+N IE
Sbjct: 259 SSPVSIFDFERQAPGTEVDSFGVDTSWRRKLSPELENEQLDNL------MIEEMKVNTIE 312

Query: 313 NSKHEGPKNKEKQSQEFVHIWGEICRLVEDELVRSNQLQEVMRKQGDFGSISADLESEIF 372
           ++KHEG K  EKQSQE V IWGEICRLVE EL  SN+L+E + KQ D  S+ A  ES+IF
Sbjct: 313 DNKHEGSKKNEKQSQECVDIWGEICRLVEGEL-GSNKLEEGLWKQDDIESVCAGFESQIF 371

Query: 373 DHLLNELVDQLVGNPLKA 390
            HLL EL+DQLVGNPLKA
Sbjct: 372 YHLLYELIDQLVGNPLKA 389


>Glyma02g39220.1 
          Length = 373

 Score =  321 bits (823), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 194/381 (50%), Positives = 240/381 (62%), Gaps = 29/381 (7%)

Query: 25  FNPTLCNSKS----GCLTSILHRILCSGALQTHPSDQIIELGSSMSVVSGKVQEFKAMQN 80
            + +LCNSKS    GCLT+IL RILCSG L THPSDQI EL  SM  +S KVQEFK   N
Sbjct: 1   LDSSLCNSKSATTAGCLTAILRRILCSGGLPTHPSDQIGEL-DSMPKMSDKVQEFKTKHN 59

Query: 81  TEAANSTKIS---PGVVGRLMGLDSMGEVQKXXXXXXXXXXXXXX-----XXXVDYLGEC 132
           TE+  +   +   PG++ RLMGL+SM  V++                      VDYLGEC
Sbjct: 60  TESIATATTTTITPGILERLMGLESMV-VERDTNTANESTSSSSLPRSKSMNSVDYLGEC 118

Query: 133 KRMEGLHRRVKXXXXXXXXXEVPSFHLLENENFLVLSFESGCESKEFXXXXXXXXXXXXX 192
           KRMEGLH+R K         EVP+F L E+ENFLVLSFESGC+  EF             
Sbjct: 119 KRMEGLHKRAKSSSFR----EVPTFLLHESENFLVLSFESGCDGGEFRSKERKKEKGSKE 174

Query: 193 XXXVSGMSCVNVGNGGEV---QFATNMKHKEGANGEKVKKRKKGTAAFYNTEKKVESECS 249
              +          G E+    F+  +K KE  NGEK+K+RKKGT  +   EKKV++ECS
Sbjct: 175 RSELKKNKREKEYVGSEMVGFSFSHPVKRKEVTNGEKLKRRKKGTTCY--AEKKVDTECS 232

Query: 250 SEDASPVSVFDFERDAPRTDVDIFGDDMNWRRKLSPELENDQHFILHSDGIFMNEERKIN 309
           SED+SPVS+FDFER AP T++D      +WRRKLSPELEN+Q   LH D   M +ERK+N
Sbjct: 233 SEDSSPVSIFDFERGAPETEMDT-----SWRRKLSPELENEQLDDLHCDSNLMIKERKVN 287

Query: 310 EIENSKHEGPKNKEKQSQEFVHIWGEICRLVEDELVRSNQLQEVMRKQGDFGSISADLES 369
            IE++K+EG K  EKQSQE + I GEIC LVE EL  SN+L+E + KQGD  S+ AD ES
Sbjct: 288 TIEDNKNEGSKKSEKQSQECIDIRGEICMLVEGEL-GSNRLEEGLWKQGDIESVCADFES 346

Query: 370 EIFDHLLNELVDQLVGNPLKA 390
           +IF H+L+E +DQLVG+PLKA
Sbjct: 347 QIFYHMLHEFIDQLVGDPLKA 367


>Glyma11g27140.1 
          Length = 318

 Score =  181 bits (458), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 142/368 (38%), Positives = 182/368 (49%), Gaps = 80/368 (21%)

Query: 25  FNPTLCNSKS---GCLTSILHRILCSGALQTHPSDQIIELGSSMSVVSGKVQEFKAMQNT 81
            +PT+C SKS   GCLT+IL +ILCS  L   P DQI EL SS +++S K Q FKA QN+
Sbjct: 22  LDPTMCTSKSATSGCLTAILRKILCSDGL---PRDQIRELDSSNAMLSDKDQNFKAKQNS 78

Query: 82  EAANSTKISPGVVGRLMGLDSMGEVQKXXXXXXXXXXXXXXXXXVDYLGECKRMEGLHRR 141
           E   ++  +                                     Y G     E LH+R
Sbjct: 79  ETDTASTAT----------------------TTAATVTTTTTTTPAYNG---MEEVLHKR 113

Query: 142 VKXXXXXXXXXEVPSFHLLENENFLVLSFESGC-ESKEFXXXXXXXXXXXXXXXXVSGMS 200
           VK         E P+F L E+E FL LSFE G  +S+EF                     
Sbjct: 114 VKSTLSFR---EAPTFLLHESEKFLELSFEGGGGKSREFRSNRRKREPV----------- 159

Query: 201 CVNVGNGGEVQFATNMKHKEG---ANGEKVKKRKKGTAAFYNTEKKVESECSSEDASPVS 257
           C         +   N++ + G    N  + K+R+K        + K+E E  SED+SPVS
Sbjct: 160 CA--------ELKQNVRSERGELRENKREKKRRRKKKKTICQKKNKIEVETKSEDSSPVS 211

Query: 258 VFDFERDAPRTDVDIFGDDMNWRRKLSPELENDQHFILHSDGIFMNEERKINEIENSKHE 317
           V DFER+A  T     G  ++ RRKLSP+L+NDQH  + SD                  E
Sbjct: 212 VLDFEREACAT----VG--LSSRRKLSPKLDNDQHLPVQSD-----------------DE 248

Query: 318 GPKNKEKQSQEFVHIWGEICRLVEDELVRSNQLQEVMRKQGDFGSISADLESEIFDHLLN 377
           G K KEK  QE++ IWGE+CR+VEDEL  SN++     KQGD GSISAD E+EIFD+LLN
Sbjct: 249 GSKKKEKNDQEYIDIWGEVCRIVEDELAESNKIHIWTNKQGDLGSISADFEAEIFDNLLN 308

Query: 378 ELVDQLVG 385
           ELVDQL G
Sbjct: 309 ELVDQLAG 316


>Glyma18g06960.1 
          Length = 338

 Score =  138 bits (347), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 77/145 (53%), Positives = 91/145 (62%), Gaps = 25/145 (17%)

Query: 241 EKKVESECSSEDASPVSVFDFERDAPRTDVDIFGDDMNWRRKLSPELENDQHFILHSDGI 300
           E K+E E  SED+SPVSV DFER+A  T     G  ++ RRKLSP+L+NDQH  + SDG 
Sbjct: 217 ENKIEVETKSEDSSPVSVLDFEREACAT----VG--LSARRKLSPKLDNDQHLPVRSDG- 269

Query: 301 FMNEERKINEIENSKHEGPKNKEKQSQEFVHIWGEICRLVEDELVRSNQLQEVMRKQGDF 360
                              K KE   QE++ IW E+CR+VEDEL  SN++     KQGD 
Sbjct: 270 ------------------SKKKEMNGQEYIDIWVEVCRIVEDELAESNKIHIWTNKQGDL 311

Query: 361 GSISADLESEIFDHLLNELVDQLVG 385
           GSISAD ESEIFDHLLNELVDQL G
Sbjct: 312 GSISADFESEIFDHLLNELVDQLAG 336



 Score = 93.2 bits (230), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 63/149 (42%), Positives = 82/149 (55%), Gaps = 13/149 (8%)

Query: 26  NPTLCNSKS---GCLTSILHRILCSGALQTHPSDQIIELGSSMSVVSGKVQEFKAMQNTE 82
           +PT+C SKS   GCLT+IL +ILCS  L   P DQI EL SS +++SGK Q  KA QNTE
Sbjct: 22  DPTMCTSKSTTSGCLTAILRKILCSDGL---PRDQIRELDSSNAMLSGKDQNLKAKQNTE 78

Query: 83  AANSTKISPGVVGRLMGLDSMGEVQKXXXXXXXXXXXXXXXXXVDYLGECKRMEG-LHRR 141
              +T  +   + RLMGL++   ++                  VDYLG C  ME  LH+R
Sbjct: 79  IDTTTTTTSATMARLMGLET---IEIPCGSKPNSLSRSRSMNSVDYLGVCNGMEEVLHKR 135

Query: 142 VKXXXXXXXXXEVPSFHLLENENFLVLSF 170
           VK         E P+F L E++ FL L+F
Sbjct: 136 VK---STLSFREAPTFLLHESDKFLELNF 161