Miyakogusa Predicted Gene

Lj2g3v2266450.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2266450.1 tr|B9HP31|B9HP31_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_833234 PE=4
SV=1,35.98,0.000000000000007,coiled-coil,NULL;
seg,NULL,gene.g43191.t1.1
         (226 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g39200.1                                                       149   2e-36
Glyma18g06990.1                                                       108   5e-24
Glyma14g37300.1                                                        92   3e-19
Glyma11g27120.1                                                        91   7e-19

>Glyma02g39200.1 
          Length = 1032

 Score =  149 bits (377), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 88/187 (47%), Positives = 103/187 (55%), Gaps = 3/187 (1%)

Query: 32  SDTVNVDVRTGCVSKVSNSIQIDTQTPRVTPLPMTNMXXXXXXXXXXXXPVXXXXXXXXX 91
           SDTV+++  T  V KVS ++QI  +TP   P  M N              V         
Sbjct: 500 SDTVSINTGTDHVLKVSETLQIHMKTPWAAPSLMANKSVLDHRSSSSPTRVTTDLGLGTL 559

Query: 92  XXXXXXXVQERDTPKLQNQIKHLQHLSESISPECDAINGNTSHQLTRSSCSGSNLEGIFD 151
                   Q+ DTPKLQ+Q KHLQ LS+S+S +CD  N NTSH+  RSSCSGSNLEG FD
Sbjct: 560 YTST---AQDPDTPKLQDQRKHLQRLSDSVSTDCDGTNENTSHRTARSSCSGSNLEGKFD 616

Query: 152 KVDFKSLNQLLTEKVGWQDQAIRAISQTLFLCKSVQGSVEAHTEEQTSGFLFMDQIELEK 211
             DFKSLN+LL EKVGWQDQAIRAISQTL LCKS  G              F+    L K
Sbjct: 617 LADFKSLNRLLNEKVGWQDQAIRAISQTLSLCKSGAGKRRGSHGRADIWLAFLGPDRLGK 676

Query: 212 GKLLQRL 218
            K+   L
Sbjct: 677 RKIASAL 683


>Glyma18g06990.1 
          Length = 1041

 Score =  108 bits (270), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 54/91 (59%), Positives = 67/91 (73%), Gaps = 1/91 (1%)

Query: 99  VQERDTPKLQNQIKHLQHLSESISPECDAINGNTSHQLTRSS-CSGSNLEGIFDKVDFKS 157
             E DTPKL +  K L HLS+S+S + DA+N +TSHQ+ RSS CSG NLEG F+ VDFKS
Sbjct: 577 AHEPDTPKLSDHKKPLHHLSDSLSTDFDAMNESTSHQIARSSSCSGPNLEGRFETVDFKS 636

Query: 158 LNQLLTEKVGWQDQAIRAISQTLFLCKSVQG 188
              LLTEKVGWQD+AI AI++T+  C+S  G
Sbjct: 637 FYHLLTEKVGWQDEAIYAINRTVSRCRSCAG 667


>Glyma14g37300.1 
          Length = 980

 Score = 92.4 bits (228), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 65/179 (36%), Positives = 78/179 (43%), Gaps = 30/179 (16%)

Query: 36  NVDVRTGCVSKVSNSIQIDTQTPRVTPLPMTNMXXXXXXXXXXXXPVXXXXXXXXXXXXX 95
           N+ V+     K   ++QI   TP V P  M N             PV             
Sbjct: 480 NILVKFPACPKSCITLQIHMNTPWVAPSLMANKSALDHRSSSFRTPVTTDLGLGTLYTST 539

Query: 96  XXXVQERDTPKLQNQIKHLQHLSESISPECDAINGNTSHQLTRSSCSGSNLEGIFDKVDF 155
               Q+ DTPKLQ+Q KHLQHLS+S+S +CD                           DF
Sbjct: 540 ---AQDPDTPKLQDQRKHLQHLSDSVSTDCD---------------------------DF 569

Query: 156 KSLNQLLTEKVGWQDQAIRAISQTLFLCKSVQGSVEAHTEEQTSGFLFMDQIELEKGKL 214
           KSL++LLTEKVGWQDQAI AISQTL LCKS  G              F+    L K K+
Sbjct: 570 KSLDRLLTEKVGWQDQAICAISQTLSLCKSGAGKRRGSNGRADIWLAFLGPDRLGKRKI 628


>Glyma11g27120.1 
          Length = 794

 Score = 91.3 bits (225), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 65/180 (36%), Positives = 88/180 (48%), Gaps = 19/180 (10%)

Query: 44  VSKVSNSIQIDTQTPRVTPLPMTNMXXXXXXXXXXXXPVXXXXXXXXXXXXXXXXVQERD 103
           + KVS +   D     V+P P  N+            PV                  E D
Sbjct: 307 IPKVSKT---DMHGTWVSPSPKANISLLDPTTFSSVTPVTTDLGLGTIYTSA---AHEPD 360

Query: 104 TPKLQNQIKHLQHLSESISPECDAINGNTSHQLTR-SSCSGSNLEGIFDKVDFKSLNQLL 162
           TPKL +  K L HLS+S+S + DA+N NTSHQ+ R SSCS           DFKSL  LL
Sbjct: 361 TPKLSDHKKPLHHLSDSLSTDFDAMNENTSHQIARSSSCS-----------DFKSLYHLL 409

Query: 163 TEKVGWQDQAIRAISQTLFLCKSVQGSVEAHTEEQTSGFL-FMDQIELEKGKLLQRLRRL 221
           TEKVGWQD+AI AI++T+  C+S  G + + +  +   +L F+    L K K+   L  +
Sbjct: 410 TEKVGWQDEAIYAINRTVSRCRSGAGKLSSGSHVRADIWLAFLGPDRLGKRKIASALAEI 469