Miyakogusa Predicted Gene

Lj2g3v2184480.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2184480.1 Non Chatacterized Hit- tr|E1ZAR5|E1ZAR5_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,35.83,3e-16,RIBONUCLEASES P/MRP PROTEIN SUBUNIT POP5,NULL;
OCTANOYLTRANSFERASE,NULL; RNase_P_Rpp14,Ribonuclease ,CUFF.38707.1
         (154 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g36760.1                                                       270   6e-73
Glyma02g38570.1                                                       267   4e-72
Glyma02g38570.2                                                       166   9e-42

>Glyma14g36760.1 
          Length = 154

 Score =  270 bits (689), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 126/154 (81%), Positives = 139/154 (90%)

Query: 1   MVAFKNRYMVMEVFANPNNDQVGGDPVIITQFNVTKAIKDSILVNFGECGLASSLGSLQV 60
           MV F+NRYMVMEVF NPN D+VG   VIITQFNV+KA++DSILVNFGECGLASSLGS QV
Sbjct: 1   MVGFRNRYMVMEVFLNPNRDKVGDASVIITQFNVSKAVRDSILVNFGECGLASSLGSFQV 60

Query: 61  KYVNPITNVCIIRTSREDYQHVWAAITMVRSIGNYPVMFNMLDLSGSLQACKKAALKCEE 120
           KYVNPITNVCIIR SRE+YQ VWAAITMV +IGN PVMFN+LDLSGS++ACK AALKCEE
Sbjct: 61  KYVNPITNVCIIRASREEYQKVWAAITMVTNIGNCPVMFNLLDLSGSIRACKNAALKCEE 120

Query: 121 SKFEQYKLKVGDRFSDDDTHRINSYLDRIKVLEH 154
           SKFEQYKL +GDRFS D THR+N+YLDRIKVLEH
Sbjct: 121 SKFEQYKLMLGDRFSADHTHRMNTYLDRIKVLEH 154


>Glyma02g38570.1 
          Length = 154

 Score =  267 bits (682), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 124/154 (80%), Positives = 138/154 (89%)

Query: 1   MVAFKNRYMVMEVFANPNNDQVGGDPVIITQFNVTKAIKDSILVNFGECGLASSLGSLQV 60
           MV F+NRYMVMEVF NPN D+ G D VI+TQFNV+KA++DSILVNFGECGLASSLGS QV
Sbjct: 1   MVGFRNRYMVMEVFLNPNRDKGGDDSVIVTQFNVSKAVRDSILVNFGECGLASSLGSFQV 60

Query: 61  KYVNPITNVCIIRTSREDYQHVWAAITMVRSIGNYPVMFNMLDLSGSLQACKKAALKCEE 120
           KYVNPITNVCIIR SRE YQ VW+AITMV +IGN PVMFN+LDLSGS++ACK AALKCEE
Sbjct: 61  KYVNPITNVCIIRASREQYQKVWSAITMVTNIGNCPVMFNLLDLSGSIRACKNAALKCEE 120

Query: 121 SKFEQYKLKVGDRFSDDDTHRINSYLDRIKVLEH 154
           SKFEQYKL +GDRFS D THR+N+YLDRIKVLEH
Sbjct: 121 SKFEQYKLMLGDRFSSDHTHRMNTYLDRIKVLEH 154


>Glyma02g38570.2 
          Length = 108

 Score =  166 bits (420), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 86/154 (55%), Positives = 97/154 (62%), Gaps = 46/154 (29%)

Query: 1   MVAFKNRYMVMEVFANPNNDQVGGDPVIITQFNVTKAIKDSILVNFGECGLASSLGSLQV 60
           MV F+NRYMVMEVF NPN D+ G D VI+TQFNV+KA++DSILVNFGECGLASSLGS Q 
Sbjct: 1   MVGFRNRYMVMEVFLNPNRDKGGDDSVIVTQFNVSKAVRDSILVNFGECGLASSLGSFQ- 59

Query: 61  KYVNPITNVCIIRTSREDYQHVWAAITMVRSIGNYPVMFNMLDLSGSLQACKKAALKCEE 120
                                                        GS++ACK AALKCEE
Sbjct: 60  ---------------------------------------------GSIRACKNAALKCEE 74

Query: 121 SKFEQYKLKVGDRFSDDDTHRINSYLDRIKVLEH 154
           SKFEQYKL +GDRFS D THR+N+YLDRIKVLEH
Sbjct: 75  SKFEQYKLMLGDRFSSDHTHRMNTYLDRIKVLEH 108